BLASTX nr result

ID: Coptis24_contig00015494 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015494
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300608.1| predicted protein [Populus trichocarpa] gi|2...   232   3e-59
ref|XP_002274136.2| PREDICTED: uncharacterized protein At1g76660...   230   8e-59
emb|CBI40804.3| unnamed protein product [Vitis vinifera]              230   8e-59
ref|XP_002510760.1| conserved hypothetical protein [Ricinus comm...   224   4e-57
ref|XP_003550451.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   219   2e-55

>ref|XP_002300608.1| predicted protein [Populus trichocarpa] gi|222842334|gb|EEE79881.1|
           predicted protein [Populus trichocarpa]
          Length = 470

 Score =  232 bits (591), Expect = 3e-59
 Identities = 112/144 (77%), Positives = 119/144 (82%), Gaps = 1/144 (0%)
 Frame = +3

Query: 36  WGGCWGGLSCFGSQKGGKRVVPASRIPEGNASGNRANGAQPVGMPNQATNINXXXXXXXX 215
           WGGCWG LSCF  QKGGKR+VPASRIPEGNAS  + NG QPVG+ NQAT +         
Sbjct: 11  WGGCWGALSCFSVQKGGKRIVPASRIPEGNASAAQPNGPQPVGLTNQATALAPSLLAPPS 70

Query: 216 XXXXFTNSALPSTAQSPSCFLSMSANSPGGPSN-VYATGPYAHETQLVSPPVFSTFTTEP 392
               FTNSALPSTAQSPSCFLS+SANSPGGPS+ +YATGPYAHETQLVSPPVFSTFTTEP
Sbjct: 71  SPASFTNSALPSTAQSPSCFLSLSANSPGGPSSTMYATGPYAHETQLVSPPVFSTFTTEP 130

Query: 393 STAPFTPPPELNHLTTPSSPDVPF 464
           STAP TPPPEL HLTTPSSPDVPF
Sbjct: 131 STAPLTPPPELAHLTTPSSPDVPF 154


>ref|XP_002274136.2| PREDICTED: uncharacterized protein At1g76660-like [Vitis vinifera]
          Length = 484

 Score =  230 bits (587), Expect = 8e-59
 Identities = 111/144 (77%), Positives = 119/144 (82%), Gaps = 1/144 (0%)
 Frame = +3

Query: 36  WGGCWGGLSCFGSQKGGKRVVPASRIPEGNASGNRANGAQPVGMPNQATNINXXXXXXXX 215
           WGGCWGGLSCFG+QKGGKR+VPASRIPEGNAS  + NG Q VG+ NQ T +         
Sbjct: 23  WGGCWGGLSCFGTQKGGKRIVPASRIPEGNASATQPNGPQAVGLTNQTTALAPSLLAPPS 82

Query: 216 XXXXFTNSALPSTAQSPSCFLSMSANSPGGPSN-VYATGPYAHETQLVSPPVFSTFTTEP 392
               FTNSALPSTAQSPSCFLSMSANSP GPS+ ++ATGPYAHETQLVSPPVFSTFTTEP
Sbjct: 83  SPASFTNSALPSTAQSPSCFLSMSANSPEGPSSTMFATGPYAHETQLVSPPVFSTFTTEP 142

Query: 393 STAPFTPPPELNHLTTPSSPDVPF 464
           STAP TPPPEL HLTTPSSPDVPF
Sbjct: 143 STAPLTPPPELAHLTTPSSPDVPF 166


>emb|CBI40804.3| unnamed protein product [Vitis vinifera]
          Length = 256

 Score =  230 bits (587), Expect = 8e-59
 Identities = 111/144 (77%), Positives = 119/144 (82%), Gaps = 1/144 (0%)
 Frame = +3

Query: 36  WGGCWGGLSCFGSQKGGKRVVPASRIPEGNASGNRANGAQPVGMPNQATNINXXXXXXXX 215
           WGGCWGGLSCFG+QKGGKR+VPASRIPEGNAS  + NG Q VG+ NQ T +         
Sbjct: 22  WGGCWGGLSCFGTQKGGKRIVPASRIPEGNASATQPNGPQAVGLTNQTTALAPSLLAPPS 81

Query: 216 XXXXFTNSALPSTAQSPSCFLSMSANSPGGPSN-VYATGPYAHETQLVSPPVFSTFTTEP 392
               FTNSALPSTAQSPSCFLSMSANSP GPS+ ++ATGPYAHETQLVSPPVFSTFTTEP
Sbjct: 82  SPASFTNSALPSTAQSPSCFLSMSANSPEGPSSTMFATGPYAHETQLVSPPVFSTFTTEP 141

Query: 393 STAPFTPPPELNHLTTPSSPDVPF 464
           STAP TPPPEL HLTTPSSPDVPF
Sbjct: 142 STAPLTPPPELAHLTTPSSPDVPF 165


>ref|XP_002510760.1| conserved hypothetical protein [Ricinus communis]
           gi|223551461|gb|EEF52947.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 472

 Score =  224 bits (572), Expect = 4e-57
 Identities = 108/144 (75%), Positives = 117/144 (81%), Gaps = 1/144 (0%)
 Frame = +3

Query: 36  WGGCWGGLSCFGSQKGGKRVVPASRIPEGNASGNRANGAQPVGMPNQATNINXXXXXXXX 215
           WGGCWG  SCF SQKGGKR+VPASRIPEGNA+  + NG Q  G+ NQAT +         
Sbjct: 17  WGGCWGAFSCFSSQKGGKRIVPASRIPEGNATAAQPNGPQVGGLTNQATTLAPSLLAPPS 76

Query: 216 XXXXFTNSALPSTAQSPSCFLSMSANSPGGPSN-VYATGPYAHETQLVSPPVFSTFTTEP 392
               FTNSALPSTAQSPSCFLS+SANSPGGPS+ ++ATGPYAHETQLVSPPVFSTFTTEP
Sbjct: 77  SPASFTNSALPSTAQSPSCFLSLSANSPGGPSSTMFATGPYAHETQLVSPPVFSTFTTEP 136

Query: 393 STAPFTPPPELNHLTTPSSPDVPF 464
           STAP TPPPEL HLTTPSSPDVPF
Sbjct: 137 STAPLTPPPELAHLTTPSSPDVPF 160


>ref|XP_003550451.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           At1g76660-like [Glycine max]
          Length = 475

 Score =  219 bits (557), Expect = 2e-55
 Identities = 104/144 (72%), Positives = 115/144 (79%), Gaps = 1/144 (0%)
 Frame = +3

Query: 36  WGGCWGGLSCFGSQKGGKRVVPASRIPEGNASGNRANGAQPVGMPNQATNINXXXXXXXX 215
           WGGCWG  SC GSQKGGKR+VPASRIP+ N   ++ NG Q VG+ NQAT +         
Sbjct: 17  WGGCWGAFSCLGSQKGGKRIVPASRIPDSNGPASQPNGPQVVGLTNQATGLAPSLLAPPS 76

Query: 216 XXXXFTNSALPSTAQSPSCFLSMSANSPGGPSN-VYATGPYAHETQLVSPPVFSTFTTEP 392
               FT+SALPSTAQSPSCFLS+SANSPGGPS+ ++ATGPYAHETQLVSPPVFS FTTEP
Sbjct: 77  SPASFTHSALPSTAQSPSCFLSLSANSPGGPSSTMFATGPYAHETQLVSPPVFSNFTTEP 136

Query: 393 STAPFTPPPELNHLTTPSSPDVPF 464
           STAP TPPPEL HLTTPSSPDVPF
Sbjct: 137 STAPLTPPPELAHLTTPSSPDVPF 160


Top