BLASTX nr result
ID: Coptis24_contig00015476
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00015476
(2183 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002517888.1| protein binding protein, putative [Ricinus c... 855 0.0
ref|XP_002274722.1| PREDICTED: uncharacterized RING finger prote... 843 0.0
gb|AEL99131.1| RING/U-box domain-containing protein, partial [Si... 836 0.0
gb|AEL99132.1| RING/U-box domain-containing protein, partial [Si... 832 0.0
ref|XP_003543332.1| PREDICTED: uncharacterized RING finger prote... 821 0.0
>ref|XP_002517888.1| protein binding protein, putative [Ricinus communis]
gi|223542870|gb|EEF44406.1| protein binding protein,
putative [Ricinus communis]
Length = 570
Score = 855 bits (2209), Expect = 0.0
Identities = 418/547 (76%), Positives = 465/547 (85%), Gaps = 2/547 (0%)
Frame = -1
Query: 1910 LWACFVFYLFQFVYAVRPLRETSQSWGDEWLFAKRDD-DVGPSAAWNITGTYRGTWNSQN 1734
LW F F + + V VRPL+E ++SWGDEWLF K+D+ D+GP +AWNITGTYRG+W +
Sbjct: 28 LW--FGFVVLRPVAGVRPLKERARSWGDEWLFVKKDENDLGPFSAWNITGTYRGSWKFLD 85
Query: 1733 SINGSLRFPDPGKFEGVTVFELASTPTKITGVHYVQGVIIFHDVLDH-HGAGVRSAQIRV 1557
S N S RFPD K G ++ EL STPTKITGVHYVQG IIFHDV D+ H G AQIRV
Sbjct: 86 STNSSSRFPDFRKSNGDSIIELVSTPTKITGVHYVQGAIIFHDVFDNAHNVG--GAQIRV 143
Query: 1556 EGVYIWPFRQLRMVVNSGKDEDLGQEDDYILSNPYHLLGVFSSQVFQESPGEKFWRRKYS 1377
EGVYIWPFRQLRMV NSGK+ +L QE+DYILSNPYHLLGVFSSQVFQESP +K WRRK S
Sbjct: 144 EGVYIWPFRQLRMVANSGKEAELSQEEDYILSNPYHLLGVFSSQVFQESPRDKLWRRKNS 203
Query: 1376 PTYDMEKHCNIEIAAQVSRAPSTQYDGQHERYQLEGLMESPSWDDYGECFSPMMLNATSV 1197
P Y+MEKHCNIEIAAQ++R S Q DG +RY LEGLM+SP+ DD G+CFSP++LNATSV
Sbjct: 204 PIYEMEKHCNIEIAAQITRVSSIQNDGDRDRYHLEGLMQSPAVDDDGDCFSPLLLNATSV 263
Query: 1196 NIEVYYNKAVNYTLMVTFISFLQVLLLIRQMEHSNTQSGAAKVSISVIGQQAIMDAYLCL 1017
NIEVYYNKAVNYTLMVTF+SFLQVLLLIRQMEHSNTQSGAAKVS+ +IGQQAIMDAYLCL
Sbjct: 264 NIEVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAAKVSLLMIGQQAIMDAYLCL 323
Query: 1016 LHLTAGILVESLXXXXXXXXXXXXXXFSIFEMRYLLAIWKANRPMINGEGWEAMRRELSV 837
LHLTAGILVESL FSIFEMRYLLAIWKA+RP+ +GEGWE MRRELSV
Sbjct: 324 LHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPINSGEGWETMRRELSV 383
Query: 836 LYSRFYXXXXXXXXLMYQLHNFLQPILLIMYSFWIPQIVTNVMRDSRKPLHPYYIVGMTI 657
LYSRFY +MY+ HNFL+PIL +MYSFWIPQI+TNV+RDSRKPLHP+YI+GMTI
Sbjct: 384 LYSRFYGILLGGILVMYEFHNFLRPILFLMYSFWIPQIITNVIRDSRKPLHPHYILGMTI 443
Query: 656 TRLAIPLYVFGCPNNFMRIENDKNWCICLVVFMGLQASILLLQNYLGSRCFIPRQILPEK 477
TRLAIPLY+FGCPNNFMRIE DK+WC+CL VFMGLQASILLLQ+YLGSR FIPRQILPEK
Sbjct: 444 TRLAIPLYIFGCPNNFMRIEPDKSWCMCLSVFMGLQASILLLQHYLGSRWFIPRQILPEK 503
Query: 476 YSYYRRFDQDTSLATDCVICMTAIDLSQRSTDCMVTPCDHFFHSGCLQRWMDIKMECPTC 297
YSYYRRFDQDT+ ATDCVICMTAIDL+QRS DCMVTPCDHFFHSGCLQRWMDIKMECPTC
Sbjct: 504 YSYYRRFDQDTNHATDCVICMTAIDLTQRSNDCMVTPCDHFFHSGCLQRWMDIKMECPTC 563
Query: 296 RRPLPPA 276
RR LPPA
Sbjct: 564 RRSLPPA 570
>ref|XP_002274722.1| PREDICTED: uncharacterized RING finger protein C947.10 [Vitis
vinifera] gi|302143312|emb|CBI21873.3| unnamed protein
product [Vitis vinifera]
Length = 570
Score = 843 bits (2177), Expect = 0.0
Identities = 408/551 (74%), Positives = 463/551 (84%), Gaps = 1/551 (0%)
Frame = -1
Query: 1925 RSCLMLWACFVFYLFQFVYAVRPLRETSQSWGDEWLFAKRDDD-VGPSAAWNITGTYRGT 1749
R L LW V + + V +RPLR+ + SWGDEWL+ ++D++ +GP + WNITGTY+G+
Sbjct: 23 RVVLGLWV--VLAVLRPVTGLRPLRDRAHSWGDEWLYIRKDENALGPFSYWNITGTYKGS 80
Query: 1748 WNSQNSINGSLRFPDPGKFEGVTVFELASTPTKITGVHYVQGVIIFHDVLDHHGAGVRSA 1569
W +S N S RFPD GK G ++ EL S+PTKITGVHYVQGVIIFHDV D+ V +
Sbjct: 81 WRFLDSTNSSARFPDFGKSSGNSIIELVSSPTKITGVHYVQGVIIFHDVFDNEHE-VGGS 139
Query: 1568 QIRVEGVYIWPFRQLRMVVNSGKDEDLGQEDDYILSNPYHLLGVFSSQVFQESPGEKFWR 1389
QIRVEGVYIWPFRQLRMV NSGK+ +L QE++YILSNPYHLLGVFSSQVFQESP EK WR
Sbjct: 140 QIRVEGVYIWPFRQLRMVANSGKEGELSQEEEYILSNPYHLLGVFSSQVFQESPREKIWR 199
Query: 1388 RKYSPTYDMEKHCNIEIAAQVSRAPSTQYDGQHERYQLEGLMESPSWDDYGECFSPMMLN 1209
+++SP Y+MEK CNIEIAAQ+SR STQ DG +RY LEGLMESPS DD G+CFSP++LN
Sbjct: 200 KRHSPIYEMEKRCNIEIAAQISRVSSTQNDGDRDRYHLEGLMESPSVDDDGDCFSPLLLN 259
Query: 1208 ATSVNIEVYYNKAVNYTLMVTFISFLQVLLLIRQMEHSNTQSGAAKVSISVIGQQAIMDA 1029
ATSVNIE YYNKAVNYTLMVTF+SFLQVLLLIRQMEHSNTQSGAAKVSI +IGQQAIMDA
Sbjct: 260 ATSVNIEAYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAAKVSILMIGQQAIMDA 319
Query: 1028 YLCLLHLTAGILVESLXXXXXXXXXXXXXXFSIFEMRYLLAIWKANRPMINGEGWEAMRR 849
YLCLLHLTAGILVESL FSIFEMRYLLAIWKA+RPM NGEGWE MRR
Sbjct: 320 YLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPMNNGEGWETMRR 379
Query: 848 ELSVLYSRFYXXXXXXXXLMYQLHNFLQPILLIMYSFWIPQIVTNVMRDSRKPLHPYYIV 669
ELSVLYSRFY +MY+ HNFL+PILL+MYSFWIPQI+TNV+RDSRKPLHP+YI+
Sbjct: 380 ELSVLYSRFYGILLGGILVMYEFHNFLRPILLLMYSFWIPQIITNVIRDSRKPLHPHYIL 439
Query: 668 GMTITRLAIPLYVFGCPNNFMRIENDKNWCICLVVFMGLQASILLLQNYLGSRCFIPRQI 489
GMT+TRLA+PLY+FGCPNNFMRIE K+WCICL +FMGLQASILLLQ+YLGSRCFIPRQI
Sbjct: 440 GMTVTRLAVPLYMFGCPNNFMRIEPSKSWCICLGIFMGLQASILLLQHYLGSRCFIPRQI 499
Query: 488 LPEKYSYYRRFDQDTSLATDCVICMTAIDLSQRSTDCMVTPCDHFFHSGCLQRWMDIKME 309
LPEKYSYYRR +QDT+ TDCVICMT ID++ RS +CMVTPCDHFFHSGCLQRWMDIKME
Sbjct: 500 LPEKYSYYRRSNQDTNHVTDCVICMTTIDITHRSNECMVTPCDHFFHSGCLQRWMDIKME 559
Query: 308 CPTCRRPLPPA 276
CPTCRRPLPPA
Sbjct: 560 CPTCRRPLPPA 570
>gb|AEL99131.1| RING/U-box domain-containing protein, partial [Silene latifolia]
Length = 555
Score = 836 bits (2160), Expect = 0.0
Identities = 406/540 (75%), Positives = 456/540 (84%), Gaps = 1/540 (0%)
Frame = -1
Query: 1892 FYLFQFVYAVRPLRETSQSWGDEWLFAKRDDD-VGPSAAWNITGTYRGTWNSQNSINGSL 1716
F L V ++RPL+E S+SWGDEWLF K++D+ +GP ++WNI+GTYRG W S N S
Sbjct: 19 FALLSQVSSLRPLKEQSRSWGDEWLFVKKEDNNIGPFSSWNISGTYRGNWKFTESANISA 78
Query: 1715 RFPDPGKFEGVTVFELASTPTKITGVHYVQGVIIFHDVLDHHGAGVRSAQIRVEGVYIWP 1536
RFPD K +G ++ EL STPTKITGVHYVQGVIIFHDV D+ G AQIRVEGVYIWP
Sbjct: 79 RFPDFKKSDGSSIVELMSTPTKITGVHYVQGVIIFHDVFDNDREG-GGAQIRVEGVYIWP 137
Query: 1535 FRQLRMVVNSGKDEDLGQEDDYILSNPYHLLGVFSSQVFQESPGEKFWRRKYSPTYDMEK 1356
FRQLRMV NSGKD +LG E+DY LSNPYHLLGVFSSQVFQESP + WR+K S D+EK
Sbjct: 138 FRQLRMVANSGKDGELGLEEDYFLSNPYHLLGVFSSQVFQESP--RVWRKKKSQVQDIEK 195
Query: 1355 HCNIEIAAQVSRAPSTQYDGQHERYQLEGLMESPSWDDYGECFSPMMLNATSVNIEVYYN 1176
HCNIEIAAQVSR PS Q DG+H+RY LEGLMESPS D+ G+CFSP++LNATSVNIEVYYN
Sbjct: 196 HCNIEIAAQVSRIPSLQSDGEHDRYHLEGLMESPSADEDGDCFSPLLLNATSVNIEVYYN 255
Query: 1175 KAVNYTLMVTFISFLQVLLLIRQMEHSNTQSGAAKVSISVIGQQAIMDAYLCLLHLTAGI 996
KAVNYTLMVTF+SFLQVLLLIRQMEHSNTQSGAAKVSI ++GQQAIMDAYLCLLHLTAGI
Sbjct: 256 KAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAAKVSILMVGQQAIMDAYLCLLHLTAGI 315
Query: 995 LVESLXXXXXXXXXXXXXXFSIFEMRYLLAIWKANRPMINGEGWEAMRRELSVLYSRFYX 816
LVESL FSIFEMRYLLAIWKA+RP +GEGWEAMRRELSVLYSRFY
Sbjct: 316 LVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPANSGEGWEAMRRELSVLYSRFYG 375
Query: 815 XXXXXXXLMYQLHNFLQPILLIMYSFWIPQIVTNVMRDSRKPLHPYYIVGMTITRLAIPL 636
+MY+ H++L+PILL+MYSFWIPQIVTN++RDSRKPLHP+YI+GMTITRLAIPL
Sbjct: 376 ILLGGILVMYEFHSYLRPILLLMYSFWIPQIVTNIIRDSRKPLHPHYILGMTITRLAIPL 435
Query: 635 YVFGCPNNFMRIENDKNWCICLVVFMGLQASILLLQNYLGSRCFIPRQILPEKYSYYRRF 456
YVFGCPNNFMRI+ DK WC+CL FMG Q+ +LL+Q+Y GSRCFIPRQILPEKYSYYRRF
Sbjct: 436 YVFGCPNNFMRIQPDKTWCVCLCTFMGFQSLVLLVQHYFGSRCFIPRQILPEKYSYYRRF 495
Query: 455 DQDTSLATDCVICMTAIDLSQRSTDCMVTPCDHFFHSGCLQRWMDIKMECPTCRRPLPPA 276
DQD++ TDCVICM AIDLSQRS+DCMVTPCDHFFHSGCLQRWMDIKMECPTCRR LPPA
Sbjct: 496 DQDSNRTTDCVICMAAIDLSQRSSDCMVTPCDHFFHSGCLQRWMDIKMECPTCRRSLPPA 555
>gb|AEL99132.1| RING/U-box domain-containing protein, partial [Silene latifolia]
Length = 555
Score = 832 bits (2149), Expect = 0.0
Identities = 406/540 (75%), Positives = 453/540 (83%), Gaps = 1/540 (0%)
Frame = -1
Query: 1892 FYLFQFVYAVRPLRETSQSWGDEWLFAKRDDD-VGPSAAWNITGTYRGTWNSQNSINGSL 1716
F L ++RPL+E S+SWGDEWLF K++D+ +GP ++WNI+GTYRG W S N S
Sbjct: 19 FALLSPASSLRPLKEQSRSWGDEWLFVKKEDNNIGPFSSWNISGTYRGNWKFTESANISA 78
Query: 1715 RFPDPGKFEGVTVFELASTPTKITGVHYVQGVIIFHDVLDHHGAGVRSAQIRVEGVYIWP 1536
RFPD K EG ++ EL STPTKITGVHYVQGVIIFHDV D+ G AQIRVEGVYIWP
Sbjct: 79 RFPDFKKSEGSSIVELMSTPTKITGVHYVQGVIIFHDVFDNDREG-GGAQIRVEGVYIWP 137
Query: 1535 FRQLRMVVNSGKDEDLGQEDDYILSNPYHLLGVFSSQVFQESPGEKFWRRKYSPTYDMEK 1356
FRQLRMV NSGKD +LG E+DY LSNPYHLLGVFSSQVFQESP + WR+K S D+EK
Sbjct: 138 FRQLRMVANSGKDGELGLEEDYFLSNPYHLLGVFSSQVFQESP--RVWRKKKSQVQDIEK 195
Query: 1355 HCNIEIAAQVSRAPSTQYDGQHERYQLEGLMESPSWDDYGECFSPMMLNATSVNIEVYYN 1176
HCNIEIAAQVSR PS Q DG+H+RY LEGLMESPS D+ G+CFSP++LNATSVNIEVYYN
Sbjct: 196 HCNIEIAAQVSRIPSLQSDGEHDRYHLEGLMESPSADEDGDCFSPLLLNATSVNIEVYYN 255
Query: 1175 KAVNYTLMVTFISFLQVLLLIRQMEHSNTQSGAAKVSISVIGQQAIMDAYLCLLHLTAGI 996
KAVNYTLMVTF+SFLQVLLLIRQMEHSNTQSGAAKVSI +IGQQAIMDAYLCLLHLTAGI
Sbjct: 256 KAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAAKVSILMIGQQAIMDAYLCLLHLTAGI 315
Query: 995 LVESLXXXXXXXXXXXXXXFSIFEMRYLLAIWKANRPMINGEGWEAMRRELSVLYSRFYX 816
LVESL FSIFEMRYLLAIWKA+RP +GEGW AMRRELSVLYSRFY
Sbjct: 316 LVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPANSGEGWGAMRRELSVLYSRFYG 375
Query: 815 XXXXXXXLMYQLHNFLQPILLIMYSFWIPQIVTNVMRDSRKPLHPYYIVGMTITRLAIPL 636
+MY+ H++L+PILL+MYSFWIPQIVTN++RDSRKPLHP+YI+GMTITRLAIPL
Sbjct: 376 ILLGGILVMYEFHSYLRPILLLMYSFWIPQIVTNIIRDSRKPLHPHYILGMTITRLAIPL 435
Query: 635 YVFGCPNNFMRIENDKNWCICLVVFMGLQASILLLQNYLGSRCFIPRQILPEKYSYYRRF 456
YVFGCPNNFMRI+ DK WC+CL FMG Q+ +LL+Q+Y GSRCFIPRQILPEKYSYYRRF
Sbjct: 436 YVFGCPNNFMRIQPDKTWCVCLCTFMGFQSLVLLVQHYFGSRCFIPRQILPEKYSYYRRF 495
Query: 455 DQDTSLATDCVICMTAIDLSQRSTDCMVTPCDHFFHSGCLQRWMDIKMECPTCRRPLPPA 276
DQD++ TDCVICM AIDLSQRS DCMVTPCDHFFHSGCLQRWMDIKMECPTCRR LPPA
Sbjct: 496 DQDSNRTTDCVICMAAIDLSQRSGDCMVTPCDHFFHSGCLQRWMDIKMECPTCRRSLPPA 555
>ref|XP_003543332.1| PREDICTED: uncharacterized RING finger protein C947.10-like [Glycine
max]
Length = 570
Score = 821 bits (2120), Expect = 0.0
Identities = 400/545 (73%), Positives = 454/545 (83%), Gaps = 1/545 (0%)
Frame = -1
Query: 1907 WACFVFYLFQFVYAVRPLRETSQSWGDEWLFAKRDD-DVGPSAAWNITGTYRGTWNSQNS 1731
W V L V +RPLRE ++ W DE LF ++++ ++GP + WNITGTY+GTW +
Sbjct: 27 WWWVVLLLVNPVAGLRPLRERTRPWDDEGLFTRKEESNLGPFSQWNITGTYKGTWKFLDI 86
Query: 1730 INGSLRFPDPGKFEGVTVFELASTPTKITGVHYVQGVIIFHDVLDHHGAGVRSAQIRVEG 1551
NGS RFPD K G +V ELASTPTKI+GVHYVQGV+IFHDV D+ V +QIR+EG
Sbjct: 87 TNGSSRFPDIRKTNGNSVIELASTPTKISGVHYVQGVVIFHDVFDNE-YDVGGSQIRIEG 145
Query: 1550 VYIWPFRQLRMVVNSGKDEDLGQEDDYILSNPYHLLGVFSSQVFQESPGEKFWRRKYSPT 1371
VYIWPFRQLRMV NSGK+ +L Q +DYILSNPYHLLGVFSSQV Q+S +K RRK+S
Sbjct: 146 VYIWPFRQLRMVANSGKEGELNQNEDYILSNPYHLLGVFSSQVLQDSSRDKMLRRKHSLI 205
Query: 1370 YDMEKHCNIEIAAQVSRAPSTQYDGQHERYQLEGLMESPSWDDYGECFSPMMLNATSVNI 1191
+DMEKHCNIEIAAQ+S PS +G+H+ + LEGLMESPS +D G+CFSP++LNATSV I
Sbjct: 206 HDMEKHCNIEIAAQISHLPSQNNEGEHDHFHLEGLMESPSANDDGDCFSPLLLNATSVKI 265
Query: 1190 EVYYNKAVNYTLMVTFISFLQVLLLIRQMEHSNTQSGAAKVSISVIGQQAIMDAYLCLLH 1011
EVYYNKAVNYTLMVTF+SFLQVLLLIRQMEHS+TQSGAAKVSI +IGQQAIMDAYLCLLH
Sbjct: 266 EVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSSTQSGAAKVSILMIGQQAIMDAYLCLLH 325
Query: 1010 LTAGILVESLXXXXXXXXXXXXXXFSIFEMRYLLAIWKANRPMINGEGWEAMRRELSVLY 831
LTAGILVESL FSIFEMRYLLAIWKANRP+ NGEGWE MRRELSVLY
Sbjct: 326 LTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKANRPLSNGEGWETMRRELSVLY 385
Query: 830 SRFYXXXXXXXXLMYQLHNFLQPILLIMYSFWIPQIVTNVMRDSRKPLHPYYIVGMTITR 651
SRFY LMY+ HN+L+PILL+ YSFWIPQI+TNV+RDSRKPLHP+YI+G+T+TR
Sbjct: 386 SRFYGILLGGILLMYEFHNYLRPILLLTYSFWIPQIITNVIRDSRKPLHPHYILGITVTR 445
Query: 650 LAIPLYVFGCPNNFMRIENDKNWCICLVVFMGLQASILLLQNYLGSRCFIPRQILPEKYS 471
LAIPLY+FGCPNNFMRIE DK+WC+CL VF+GLQA+ILLLQ+YLGSR FIPRQILPEKYS
Sbjct: 446 LAIPLYIFGCPNNFMRIEPDKSWCVCLAVFIGLQAAILLLQHYLGSRWFIPRQILPEKYS 505
Query: 470 YYRRFDQDTSLATDCVICMTAIDLSQRSTDCMVTPCDHFFHSGCLQRWMDIKMECPTCRR 291
YYRRFDQDT ATDCVICMTAIDLSQRS DCMVTPCDHFFHSGCLQRWMDIKMECPTCRR
Sbjct: 506 YYRRFDQDTRHATDCVICMTAIDLSQRSNDCMVTPCDHFFHSGCLQRWMDIKMECPTCRR 565
Query: 290 PLPPA 276
PLPPA
Sbjct: 566 PLPPA 570