BLASTX nr result

ID: Coptis24_contig00015476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015476
         (2183 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517888.1| protein binding protein, putative [Ricinus c...   855   0.0  
ref|XP_002274722.1| PREDICTED: uncharacterized RING finger prote...   843   0.0  
gb|AEL99131.1| RING/U-box domain-containing protein, partial [Si...   836   0.0  
gb|AEL99132.1| RING/U-box domain-containing protein, partial [Si...   832   0.0  
ref|XP_003543332.1| PREDICTED: uncharacterized RING finger prote...   821   0.0  

>ref|XP_002517888.1| protein binding protein, putative [Ricinus communis]
            gi|223542870|gb|EEF44406.1| protein binding protein,
            putative [Ricinus communis]
          Length = 570

 Score =  855 bits (2209), Expect = 0.0
 Identities = 418/547 (76%), Positives = 465/547 (85%), Gaps = 2/547 (0%)
 Frame = -1

Query: 1910 LWACFVFYLFQFVYAVRPLRETSQSWGDEWLFAKRDD-DVGPSAAWNITGTYRGTWNSQN 1734
            LW  F F + + V  VRPL+E ++SWGDEWLF K+D+ D+GP +AWNITGTYRG+W   +
Sbjct: 28   LW--FGFVVLRPVAGVRPLKERARSWGDEWLFVKKDENDLGPFSAWNITGTYRGSWKFLD 85

Query: 1733 SINGSLRFPDPGKFEGVTVFELASTPTKITGVHYVQGVIIFHDVLDH-HGAGVRSAQIRV 1557
            S N S RFPD  K  G ++ EL STPTKITGVHYVQG IIFHDV D+ H  G   AQIRV
Sbjct: 86   STNSSSRFPDFRKSNGDSIIELVSTPTKITGVHYVQGAIIFHDVFDNAHNVG--GAQIRV 143

Query: 1556 EGVYIWPFRQLRMVVNSGKDEDLGQEDDYILSNPYHLLGVFSSQVFQESPGEKFWRRKYS 1377
            EGVYIWPFRQLRMV NSGK+ +L QE+DYILSNPYHLLGVFSSQVFQESP +K WRRK S
Sbjct: 144  EGVYIWPFRQLRMVANSGKEAELSQEEDYILSNPYHLLGVFSSQVFQESPRDKLWRRKNS 203

Query: 1376 PTYDMEKHCNIEIAAQVSRAPSTQYDGQHERYQLEGLMESPSWDDYGECFSPMMLNATSV 1197
            P Y+MEKHCNIEIAAQ++R  S Q DG  +RY LEGLM+SP+ DD G+CFSP++LNATSV
Sbjct: 204  PIYEMEKHCNIEIAAQITRVSSIQNDGDRDRYHLEGLMQSPAVDDDGDCFSPLLLNATSV 263

Query: 1196 NIEVYYNKAVNYTLMVTFISFLQVLLLIRQMEHSNTQSGAAKVSISVIGQQAIMDAYLCL 1017
            NIEVYYNKAVNYTLMVTF+SFLQVLLLIRQMEHSNTQSGAAKVS+ +IGQQAIMDAYLCL
Sbjct: 264  NIEVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAAKVSLLMIGQQAIMDAYLCL 323

Query: 1016 LHLTAGILVESLXXXXXXXXXXXXXXFSIFEMRYLLAIWKANRPMINGEGWEAMRRELSV 837
            LHLTAGILVESL              FSIFEMRYLLAIWKA+RP+ +GEGWE MRRELSV
Sbjct: 324  LHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPINSGEGWETMRRELSV 383

Query: 836  LYSRFYXXXXXXXXLMYQLHNFLQPILLIMYSFWIPQIVTNVMRDSRKPLHPYYIVGMTI 657
            LYSRFY        +MY+ HNFL+PIL +MYSFWIPQI+TNV+RDSRKPLHP+YI+GMTI
Sbjct: 384  LYSRFYGILLGGILVMYEFHNFLRPILFLMYSFWIPQIITNVIRDSRKPLHPHYILGMTI 443

Query: 656  TRLAIPLYVFGCPNNFMRIENDKNWCICLVVFMGLQASILLLQNYLGSRCFIPRQILPEK 477
            TRLAIPLY+FGCPNNFMRIE DK+WC+CL VFMGLQASILLLQ+YLGSR FIPRQILPEK
Sbjct: 444  TRLAIPLYIFGCPNNFMRIEPDKSWCMCLSVFMGLQASILLLQHYLGSRWFIPRQILPEK 503

Query: 476  YSYYRRFDQDTSLATDCVICMTAIDLSQRSTDCMVTPCDHFFHSGCLQRWMDIKMECPTC 297
            YSYYRRFDQDT+ ATDCVICMTAIDL+QRS DCMVTPCDHFFHSGCLQRWMDIKMECPTC
Sbjct: 504  YSYYRRFDQDTNHATDCVICMTAIDLTQRSNDCMVTPCDHFFHSGCLQRWMDIKMECPTC 563

Query: 296  RRPLPPA 276
            RR LPPA
Sbjct: 564  RRSLPPA 570


>ref|XP_002274722.1| PREDICTED: uncharacterized RING finger protein C947.10 [Vitis
            vinifera] gi|302143312|emb|CBI21873.3| unnamed protein
            product [Vitis vinifera]
          Length = 570

 Score =  843 bits (2177), Expect = 0.0
 Identities = 408/551 (74%), Positives = 463/551 (84%), Gaps = 1/551 (0%)
 Frame = -1

Query: 1925 RSCLMLWACFVFYLFQFVYAVRPLRETSQSWGDEWLFAKRDDD-VGPSAAWNITGTYRGT 1749
            R  L LW   V  + + V  +RPLR+ + SWGDEWL+ ++D++ +GP + WNITGTY+G+
Sbjct: 23   RVVLGLWV--VLAVLRPVTGLRPLRDRAHSWGDEWLYIRKDENALGPFSYWNITGTYKGS 80

Query: 1748 WNSQNSINGSLRFPDPGKFEGVTVFELASTPTKITGVHYVQGVIIFHDVLDHHGAGVRSA 1569
            W   +S N S RFPD GK  G ++ EL S+PTKITGVHYVQGVIIFHDV D+    V  +
Sbjct: 81   WRFLDSTNSSARFPDFGKSSGNSIIELVSSPTKITGVHYVQGVIIFHDVFDNEHE-VGGS 139

Query: 1568 QIRVEGVYIWPFRQLRMVVNSGKDEDLGQEDDYILSNPYHLLGVFSSQVFQESPGEKFWR 1389
            QIRVEGVYIWPFRQLRMV NSGK+ +L QE++YILSNPYHLLGVFSSQVFQESP EK WR
Sbjct: 140  QIRVEGVYIWPFRQLRMVANSGKEGELSQEEEYILSNPYHLLGVFSSQVFQESPREKIWR 199

Query: 1388 RKYSPTYDMEKHCNIEIAAQVSRAPSTQYDGQHERYQLEGLMESPSWDDYGECFSPMMLN 1209
            +++SP Y+MEK CNIEIAAQ+SR  STQ DG  +RY LEGLMESPS DD G+CFSP++LN
Sbjct: 200  KRHSPIYEMEKRCNIEIAAQISRVSSTQNDGDRDRYHLEGLMESPSVDDDGDCFSPLLLN 259

Query: 1208 ATSVNIEVYYNKAVNYTLMVTFISFLQVLLLIRQMEHSNTQSGAAKVSISVIGQQAIMDA 1029
            ATSVNIE YYNKAVNYTLMVTF+SFLQVLLLIRQMEHSNTQSGAAKVSI +IGQQAIMDA
Sbjct: 260  ATSVNIEAYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAAKVSILMIGQQAIMDA 319

Query: 1028 YLCLLHLTAGILVESLXXXXXXXXXXXXXXFSIFEMRYLLAIWKANRPMINGEGWEAMRR 849
            YLCLLHLTAGILVESL              FSIFEMRYLLAIWKA+RPM NGEGWE MRR
Sbjct: 320  YLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPMNNGEGWETMRR 379

Query: 848  ELSVLYSRFYXXXXXXXXLMYQLHNFLQPILLIMYSFWIPQIVTNVMRDSRKPLHPYYIV 669
            ELSVLYSRFY        +MY+ HNFL+PILL+MYSFWIPQI+TNV+RDSRKPLHP+YI+
Sbjct: 380  ELSVLYSRFYGILLGGILVMYEFHNFLRPILLLMYSFWIPQIITNVIRDSRKPLHPHYIL 439

Query: 668  GMTITRLAIPLYVFGCPNNFMRIENDKNWCICLVVFMGLQASILLLQNYLGSRCFIPRQI 489
            GMT+TRLA+PLY+FGCPNNFMRIE  K+WCICL +FMGLQASILLLQ+YLGSRCFIPRQI
Sbjct: 440  GMTVTRLAVPLYMFGCPNNFMRIEPSKSWCICLGIFMGLQASILLLQHYLGSRCFIPRQI 499

Query: 488  LPEKYSYYRRFDQDTSLATDCVICMTAIDLSQRSTDCMVTPCDHFFHSGCLQRWMDIKME 309
            LPEKYSYYRR +QDT+  TDCVICMT ID++ RS +CMVTPCDHFFHSGCLQRWMDIKME
Sbjct: 500  LPEKYSYYRRSNQDTNHVTDCVICMTTIDITHRSNECMVTPCDHFFHSGCLQRWMDIKME 559

Query: 308  CPTCRRPLPPA 276
            CPTCRRPLPPA
Sbjct: 560  CPTCRRPLPPA 570


>gb|AEL99131.1| RING/U-box domain-containing protein, partial [Silene latifolia]
          Length = 555

 Score =  836 bits (2160), Expect = 0.0
 Identities = 406/540 (75%), Positives = 456/540 (84%), Gaps = 1/540 (0%)
 Frame = -1

Query: 1892 FYLFQFVYAVRPLRETSQSWGDEWLFAKRDDD-VGPSAAWNITGTYRGTWNSQNSINGSL 1716
            F L   V ++RPL+E S+SWGDEWLF K++D+ +GP ++WNI+GTYRG W    S N S 
Sbjct: 19   FALLSQVSSLRPLKEQSRSWGDEWLFVKKEDNNIGPFSSWNISGTYRGNWKFTESANISA 78

Query: 1715 RFPDPGKFEGVTVFELASTPTKITGVHYVQGVIIFHDVLDHHGAGVRSAQIRVEGVYIWP 1536
            RFPD  K +G ++ EL STPTKITGVHYVQGVIIFHDV D+   G   AQIRVEGVYIWP
Sbjct: 79   RFPDFKKSDGSSIVELMSTPTKITGVHYVQGVIIFHDVFDNDREG-GGAQIRVEGVYIWP 137

Query: 1535 FRQLRMVVNSGKDEDLGQEDDYILSNPYHLLGVFSSQVFQESPGEKFWRRKYSPTYDMEK 1356
            FRQLRMV NSGKD +LG E+DY LSNPYHLLGVFSSQVFQESP  + WR+K S   D+EK
Sbjct: 138  FRQLRMVANSGKDGELGLEEDYFLSNPYHLLGVFSSQVFQESP--RVWRKKKSQVQDIEK 195

Query: 1355 HCNIEIAAQVSRAPSTQYDGQHERYQLEGLMESPSWDDYGECFSPMMLNATSVNIEVYYN 1176
            HCNIEIAAQVSR PS Q DG+H+RY LEGLMESPS D+ G+CFSP++LNATSVNIEVYYN
Sbjct: 196  HCNIEIAAQVSRIPSLQSDGEHDRYHLEGLMESPSADEDGDCFSPLLLNATSVNIEVYYN 255

Query: 1175 KAVNYTLMVTFISFLQVLLLIRQMEHSNTQSGAAKVSISVIGQQAIMDAYLCLLHLTAGI 996
            KAVNYTLMVTF+SFLQVLLLIRQMEHSNTQSGAAKVSI ++GQQAIMDAYLCLLHLTAGI
Sbjct: 256  KAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAAKVSILMVGQQAIMDAYLCLLHLTAGI 315

Query: 995  LVESLXXXXXXXXXXXXXXFSIFEMRYLLAIWKANRPMINGEGWEAMRRELSVLYSRFYX 816
            LVESL              FSIFEMRYLLAIWKA+RP  +GEGWEAMRRELSVLYSRFY 
Sbjct: 316  LVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPANSGEGWEAMRRELSVLYSRFYG 375

Query: 815  XXXXXXXLMYQLHNFLQPILLIMYSFWIPQIVTNVMRDSRKPLHPYYIVGMTITRLAIPL 636
                   +MY+ H++L+PILL+MYSFWIPQIVTN++RDSRKPLHP+YI+GMTITRLAIPL
Sbjct: 376  ILLGGILVMYEFHSYLRPILLLMYSFWIPQIVTNIIRDSRKPLHPHYILGMTITRLAIPL 435

Query: 635  YVFGCPNNFMRIENDKNWCICLVVFMGLQASILLLQNYLGSRCFIPRQILPEKYSYYRRF 456
            YVFGCPNNFMRI+ DK WC+CL  FMG Q+ +LL+Q+Y GSRCFIPRQILPEKYSYYRRF
Sbjct: 436  YVFGCPNNFMRIQPDKTWCVCLCTFMGFQSLVLLVQHYFGSRCFIPRQILPEKYSYYRRF 495

Query: 455  DQDTSLATDCVICMTAIDLSQRSTDCMVTPCDHFFHSGCLQRWMDIKMECPTCRRPLPPA 276
            DQD++  TDCVICM AIDLSQRS+DCMVTPCDHFFHSGCLQRWMDIKMECPTCRR LPPA
Sbjct: 496  DQDSNRTTDCVICMAAIDLSQRSSDCMVTPCDHFFHSGCLQRWMDIKMECPTCRRSLPPA 555


>gb|AEL99132.1| RING/U-box domain-containing protein, partial [Silene latifolia]
          Length = 555

 Score =  832 bits (2149), Expect = 0.0
 Identities = 406/540 (75%), Positives = 453/540 (83%), Gaps = 1/540 (0%)
 Frame = -1

Query: 1892 FYLFQFVYAVRPLRETSQSWGDEWLFAKRDDD-VGPSAAWNITGTYRGTWNSQNSINGSL 1716
            F L     ++RPL+E S+SWGDEWLF K++D+ +GP ++WNI+GTYRG W    S N S 
Sbjct: 19   FALLSPASSLRPLKEQSRSWGDEWLFVKKEDNNIGPFSSWNISGTYRGNWKFTESANISA 78

Query: 1715 RFPDPGKFEGVTVFELASTPTKITGVHYVQGVIIFHDVLDHHGAGVRSAQIRVEGVYIWP 1536
            RFPD  K EG ++ EL STPTKITGVHYVQGVIIFHDV D+   G   AQIRVEGVYIWP
Sbjct: 79   RFPDFKKSEGSSIVELMSTPTKITGVHYVQGVIIFHDVFDNDREG-GGAQIRVEGVYIWP 137

Query: 1535 FRQLRMVVNSGKDEDLGQEDDYILSNPYHLLGVFSSQVFQESPGEKFWRRKYSPTYDMEK 1356
            FRQLRMV NSGKD +LG E+DY LSNPYHLLGVFSSQVFQESP  + WR+K S   D+EK
Sbjct: 138  FRQLRMVANSGKDGELGLEEDYFLSNPYHLLGVFSSQVFQESP--RVWRKKKSQVQDIEK 195

Query: 1355 HCNIEIAAQVSRAPSTQYDGQHERYQLEGLMESPSWDDYGECFSPMMLNATSVNIEVYYN 1176
            HCNIEIAAQVSR PS Q DG+H+RY LEGLMESPS D+ G+CFSP++LNATSVNIEVYYN
Sbjct: 196  HCNIEIAAQVSRIPSLQSDGEHDRYHLEGLMESPSADEDGDCFSPLLLNATSVNIEVYYN 255

Query: 1175 KAVNYTLMVTFISFLQVLLLIRQMEHSNTQSGAAKVSISVIGQQAIMDAYLCLLHLTAGI 996
            KAVNYTLMVTF+SFLQVLLLIRQMEHSNTQSGAAKVSI +IGQQAIMDAYLCLLHLTAGI
Sbjct: 256  KAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAAKVSILMIGQQAIMDAYLCLLHLTAGI 315

Query: 995  LVESLXXXXXXXXXXXXXXFSIFEMRYLLAIWKANRPMINGEGWEAMRRELSVLYSRFYX 816
            LVESL              FSIFEMRYLLAIWKA+RP  +GEGW AMRRELSVLYSRFY 
Sbjct: 316  LVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPANSGEGWGAMRRELSVLYSRFYG 375

Query: 815  XXXXXXXLMYQLHNFLQPILLIMYSFWIPQIVTNVMRDSRKPLHPYYIVGMTITRLAIPL 636
                   +MY+ H++L+PILL+MYSFWIPQIVTN++RDSRKPLHP+YI+GMTITRLAIPL
Sbjct: 376  ILLGGILVMYEFHSYLRPILLLMYSFWIPQIVTNIIRDSRKPLHPHYILGMTITRLAIPL 435

Query: 635  YVFGCPNNFMRIENDKNWCICLVVFMGLQASILLLQNYLGSRCFIPRQILPEKYSYYRRF 456
            YVFGCPNNFMRI+ DK WC+CL  FMG Q+ +LL+Q+Y GSRCFIPRQILPEKYSYYRRF
Sbjct: 436  YVFGCPNNFMRIQPDKTWCVCLCTFMGFQSLVLLVQHYFGSRCFIPRQILPEKYSYYRRF 495

Query: 455  DQDTSLATDCVICMTAIDLSQRSTDCMVTPCDHFFHSGCLQRWMDIKMECPTCRRPLPPA 276
            DQD++  TDCVICM AIDLSQRS DCMVTPCDHFFHSGCLQRWMDIKMECPTCRR LPPA
Sbjct: 496  DQDSNRTTDCVICMAAIDLSQRSGDCMVTPCDHFFHSGCLQRWMDIKMECPTCRRSLPPA 555


>ref|XP_003543332.1| PREDICTED: uncharacterized RING finger protein C947.10-like [Glycine
            max]
          Length = 570

 Score =  821 bits (2120), Expect = 0.0
 Identities = 400/545 (73%), Positives = 454/545 (83%), Gaps = 1/545 (0%)
 Frame = -1

Query: 1907 WACFVFYLFQFVYAVRPLRETSQSWGDEWLFAKRDD-DVGPSAAWNITGTYRGTWNSQNS 1731
            W   V  L   V  +RPLRE ++ W DE LF ++++ ++GP + WNITGTY+GTW   + 
Sbjct: 27   WWWVVLLLVNPVAGLRPLRERTRPWDDEGLFTRKEESNLGPFSQWNITGTYKGTWKFLDI 86

Query: 1730 INGSLRFPDPGKFEGVTVFELASTPTKITGVHYVQGVIIFHDVLDHHGAGVRSAQIRVEG 1551
             NGS RFPD  K  G +V ELASTPTKI+GVHYVQGV+IFHDV D+    V  +QIR+EG
Sbjct: 87   TNGSSRFPDIRKTNGNSVIELASTPTKISGVHYVQGVVIFHDVFDNE-YDVGGSQIRIEG 145

Query: 1550 VYIWPFRQLRMVVNSGKDEDLGQEDDYILSNPYHLLGVFSSQVFQESPGEKFWRRKYSPT 1371
            VYIWPFRQLRMV NSGK+ +L Q +DYILSNPYHLLGVFSSQV Q+S  +K  RRK+S  
Sbjct: 146  VYIWPFRQLRMVANSGKEGELNQNEDYILSNPYHLLGVFSSQVLQDSSRDKMLRRKHSLI 205

Query: 1370 YDMEKHCNIEIAAQVSRAPSTQYDGQHERYQLEGLMESPSWDDYGECFSPMMLNATSVNI 1191
            +DMEKHCNIEIAAQ+S  PS   +G+H+ + LEGLMESPS +D G+CFSP++LNATSV I
Sbjct: 206  HDMEKHCNIEIAAQISHLPSQNNEGEHDHFHLEGLMESPSANDDGDCFSPLLLNATSVKI 265

Query: 1190 EVYYNKAVNYTLMVTFISFLQVLLLIRQMEHSNTQSGAAKVSISVIGQQAIMDAYLCLLH 1011
            EVYYNKAVNYTLMVTF+SFLQVLLLIRQMEHS+TQSGAAKVSI +IGQQAIMDAYLCLLH
Sbjct: 266  EVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSSTQSGAAKVSILMIGQQAIMDAYLCLLH 325

Query: 1010 LTAGILVESLXXXXXXXXXXXXXXFSIFEMRYLLAIWKANRPMINGEGWEAMRRELSVLY 831
            LTAGILVESL              FSIFEMRYLLAIWKANRP+ NGEGWE MRRELSVLY
Sbjct: 326  LTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKANRPLSNGEGWETMRRELSVLY 385

Query: 830  SRFYXXXXXXXXLMYQLHNFLQPILLIMYSFWIPQIVTNVMRDSRKPLHPYYIVGMTITR 651
            SRFY        LMY+ HN+L+PILL+ YSFWIPQI+TNV+RDSRKPLHP+YI+G+T+TR
Sbjct: 386  SRFYGILLGGILLMYEFHNYLRPILLLTYSFWIPQIITNVIRDSRKPLHPHYILGITVTR 445

Query: 650  LAIPLYVFGCPNNFMRIENDKNWCICLVVFMGLQASILLLQNYLGSRCFIPRQILPEKYS 471
            LAIPLY+FGCPNNFMRIE DK+WC+CL VF+GLQA+ILLLQ+YLGSR FIPRQILPEKYS
Sbjct: 446  LAIPLYIFGCPNNFMRIEPDKSWCVCLAVFIGLQAAILLLQHYLGSRWFIPRQILPEKYS 505

Query: 470  YYRRFDQDTSLATDCVICMTAIDLSQRSTDCMVTPCDHFFHSGCLQRWMDIKMECPTCRR 291
            YYRRFDQDT  ATDCVICMTAIDLSQRS DCMVTPCDHFFHSGCLQRWMDIKMECPTCRR
Sbjct: 506  YYRRFDQDTRHATDCVICMTAIDLSQRSNDCMVTPCDHFFHSGCLQRWMDIKMECPTCRR 565

Query: 290  PLPPA 276
            PLPPA
Sbjct: 566  PLPPA 570


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