BLASTX nr result

ID: Coptis24_contig00015471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015471
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533694.1| Ent-kaurene synthase B, chloroplast precurso...    60   1e-13
gb|AEN74904.1| ent-kaurene synthase [Pyrus communis]                   57   3e-13
gb|AFG18184.1| ent-kaurene synthase [Malus x domestica]                54   1e-12
emb|CBI24150.3| unnamed protein product [Vitis vinifera]               48   4e-12
ref|XP_002265005.2| PREDICTED: ent-kaur-16-ene synthase, chlorop...    48   4e-12

>ref|XP_002533694.1| Ent-kaurene synthase B, chloroplast precursor, putative [Ricinus
           communis] gi|223526405|gb|EEF28689.1| Ent-kaurene
           synthase B, chloroplast precursor, putative [Ricinus
           communis]
          Length = 808

 Score = 60.1 bits (144), Expect(2) = 1e-13
 Identities = 31/57 (54%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
 Frame = +3

Query: 6   SMLKSR-VNIASGTPSRCSGSNSEGGNLYLAYVAEGLGKSQNWKDIWKHQRKNGSLF 173
           +ML  R V++ SG+     GSN+EG   YLAY+AEG+GK Q+W+ + K+QRKNGSLF
Sbjct: 134 AMLHRRDVDLKSGS----GGSNTEGRKAYLAYIAEGIGKFQDWEMVMKYQRKNGSLF 186



 Score = 40.8 bits (94), Expect(2) = 1e-13
 Identities = 18/31 (58%), Positives = 25/31 (80%)
 Frame = +2

Query: 176 SPSTTVAALAKLQDINCLNYLRSLLEKSGNA 268
           SPSTT AA + L++ +CL YL+S+L+K GNA
Sbjct: 188 SPSTTAAAFSHLRNADCLQYLQSVLQKYGNA 218


>gb|AEN74904.1| ent-kaurene synthase [Pyrus communis]
          Length = 737

 Score = 56.6 bits (135), Expect(2) = 3e-13
 Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 13/69 (18%)
 Frame = +3

Query: 6   SMLKSRVNIASGTPS-------------RCSGSNSEGGNLYLAYVAEGLGKSQNWKDIWK 146
           S L  ++N+  G P+             R   SNSEG   +LAY++EG GKSQ+W  + K
Sbjct: 117 SALNLKMNLPLGAPTLDALFHRRDFELKRGYASNSEGWRTFLAYISEGFGKSQDWDLVMK 176

Query: 147 HQRKNGSLF 173
           +QRKNGSLF
Sbjct: 177 YQRKNGSLF 185



 Score = 43.1 bits (100), Expect(2) = 3e-13
 Identities = 20/31 (64%), Positives = 24/31 (77%)
 Frame = +2

Query: 176 SPSTTVAALAKLQDINCLNYLRSLLEKSGNA 268
           SPSTT +A   L++ +CL YLRSLLEK GNA
Sbjct: 187 SPSTTASAFTHLKNADCLKYLRSLLEKFGNA 217


>gb|AFG18184.1| ent-kaurene synthase [Malus x domestica]
          Length = 737

 Score = 53.9 bits (128), Expect(2) = 1e-12
 Identities = 24/37 (64%), Positives = 29/37 (78%)
 Frame = +3

Query: 63  SNSEGGNLYLAYVAEGLGKSQNWKDIWKHQRKNGSLF 173
           SNSEG    LAY++EG GKSQ+W  + K+QRKNGSLF
Sbjct: 149 SNSEGWRTLLAYISEGFGKSQDWDLVMKYQRKNGSLF 185



 Score = 43.5 bits (101), Expect(2) = 1e-12
 Identities = 20/31 (64%), Positives = 25/31 (80%)
 Frame = +2

Query: 176 SPSTTVAALAKLQDINCLNYLRSLLEKSGNA 268
           SP+TT +A A L++ +CL YLRSLLEK GNA
Sbjct: 187 SPATTASAFAHLKNADCLKYLRSLLEKFGNA 217


>emb|CBI24150.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score = 48.1 bits (113), Expect(2) = 4e-12
 Identities = 19/37 (51%), Positives = 29/37 (78%)
 Frame = +3

Query: 60  GSNSEGGNLYLAYVAEGLGKSQNWKDIWKHQRKNGSL 170
           GSN++    YLAY++EG+G+ Q+W+ + K+Q KNGSL
Sbjct: 236 GSNTKSREAYLAYISEGMGRLQDWEMVMKYQMKNGSL 272



 Score = 47.8 bits (112), Expect(2) = 4e-12
 Identities = 23/31 (74%), Positives = 25/31 (80%)
 Frame = +2

Query: 176 SPSTTVAALAKLQDINCLNYLRSLLEKSGNA 268
           SPS T AAL+ LQ+  CLNYLRSLLEK GNA
Sbjct: 275 SPSATAAALSHLQNAGCLNYLRSLLEKFGNA 305


>ref|XP_002265005.2| PREDICTED: ent-kaur-16-ene synthase, chloroplastic-like [Vitis
           vinifera]
          Length = 793

 Score = 48.1 bits (113), Expect(2) = 4e-12
 Identities = 19/37 (51%), Positives = 29/37 (78%)
 Frame = +3

Query: 60  GSNSEGGNLYLAYVAEGLGKSQNWKDIWKHQRKNGSL 170
           GSN++    YLAY++EG+G+ Q+W+ + K+Q KNGSL
Sbjct: 211 GSNTKSREAYLAYISEGMGRLQDWEMVMKYQMKNGSL 247



 Score = 47.8 bits (112), Expect(2) = 4e-12
 Identities = 23/31 (74%), Positives = 25/31 (80%)
 Frame = +2

Query: 176 SPSTTVAALAKLQDINCLNYLRSLLEKSGNA 268
           SPS T AAL+ LQ+  CLNYLRSLLEK GNA
Sbjct: 250 SPSATAAALSHLQNAGCLNYLRSLLEKFGNA 280


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