BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015466
         (842 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containi...   425   e-117
ref|XP_003602631.1| Pentatricopeptide repeat-containing protein ...   423   e-116
ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containi...   417   e-114
ref|XP_002310520.1| predicted protein [Populus trichocarpa] gi|2...   414   e-113
ref|NP_178983.1| pentatricopeptide repeat-containing protein [Ar...   401   e-109

>ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
            [Vitis vinifera]
          Length = 684

 Score =  425 bits (1093), Expect = e-117
 Identities = 205/280 (73%), Positives = 230/280 (82%)
 Frame = +1

Query: 1    KNVVSWNALIAGYAQNGENEEALELFCRLKRESIWPTHYTFGNVXXXXXXXXXXQLGKQA 180
            +NVVSWNALIAGY QNGENEEAL LF  LKRESIWPTHYTFGN+           LG+QA
Sbjct: 344  RNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQA 403

Query: 181  HTHVLKHGIRFVSGPESDIFVGNSLVDMYTKCGLIEDGYRVFESMSEHDQVSWNAMIVGY 360
            HTHVLK G  F SG ESDIFVGNSL+DMY KCG IEDG RVFE M E D VSWNA+IVGY
Sbjct: 404  HTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGY 463

Query: 361  AQNGKGSEALALFSRMLRSGERPDHVMMIGVLSACSHAGMVEEGQRYFYSMTQEHGLVPS 540
            AQNG G+EAL +F +ML  GE+PDHV MIGVL ACSHAG+VEEG+ YF+SM +EHGL+P 
Sbjct: 464  AQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSM-EEHGLIPL 522

Query: 541  KDHYTCMVDLLGRAGCVREAKKFIESMPMEADTVLWGSLLASCKVHGNLEMGTHVAEKLL 720
            KDHYTCMVDLLGRAGC+ EAK  IE+MP+  D V+WGSLLA+CKVHGN+EMG H AEKLL
Sbjct: 523  KDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLL 582

Query: 721  ELDPSNSGPYVLLSNMYAELKQWGEVARVRTLMRRRGVVK 840
            E+DP NSGPYVLLSNMYAEL +WG+V RVR LMR++GV K
Sbjct: 583  EIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTK 622



 Score =  127 bits (318), Expect = 4e-27
 Identities = 67/203 (33%), Positives = 109/203 (53%)
 Frame = +1

Query: 13  SWNALIAGYAQNGENEEALELFCRLKRESIWPTHYTFGNVXXXXXXXXXXQLGKQAHTHV 192
           SWN++++G+AQ+   EE+LE F ++ RE      Y+FG+            +G Q H  V
Sbjct: 114 SWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALV 173

Query: 193 LKHGIRFVSGPESDIFVGNSLVDMYTKCGLIEDGYRVFESMSEHDQVSWNAMIVGYAQNG 372
            K      S   +D+++G++L+DMY+KCG +     VF  M E + V+WN++I  Y QNG
Sbjct: 174 SK------SRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNG 227

Query: 373 KGSEALALFSRMLRSGERPDHVMMIGVLSACSHAGMVEEGQRYFYSMTQEHGLVPSKDHY 552
             SEAL +F RM+ SG  PD V +  V+SAC+    ++EG +    + + +         
Sbjct: 228 PASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLG 287

Query: 553 TCMVDLLGRAGCVREAKKFIESM 621
             +VD+  +   V EA++  + M
Sbjct: 288 NALVDMYAKCSKVNEARRVFDRM 310



 Score =  110 bits (276), Expect = 3e-22
 Identities = 78/276 (28%), Positives = 122/276 (44%), Gaps = 36/276 (13%)
 Frame = +1

Query: 1    KNVVSWNALIAGYAQNGENEEALELFCRLKRESIWPTHYTFGNVXXXXXXXXXXQLGKQA 180
            +N+V+WN+LI  Y QNG   EALE+F R+    + P   T  +V          + G Q 
Sbjct: 211  RNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQI 270

Query: 181  HTHVLKHGIRFVSGPESDIFVGNSLVDMYTKCGLIEDGYRVFESMS-------------- 318
            H  V+K   +F      D+ +GN+LVDMY KC  + +  RVF+ MS              
Sbjct: 271  HARVVKTN-KF----RDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGY 325

Query: 319  -----------------EHDQVSWNAMIVGYAQNGKGSEALALFSRMLRSGERPDHVMMI 447
                             + + VSWNA+I GY QNG+  EAL LF  + R    P H    
Sbjct: 326  ARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFG 385

Query: 448  GVLSACSH-AGMVEEGQRYFYSMTQ----EHGLVPSKDHYTCMVDLLGRAGCVREAKKFI 612
             +LSAC++ A ++   Q + + + Q    + G          ++D+  + G + +  +  
Sbjct: 386  NLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVF 445

Query: 613  ESMPMEADTVLWGSLLASCKVHGNLEMGTHVAEKLL 720
            E M  E D V W +++     +G       +  K+L
Sbjct: 446  EKM-KERDCVSWNAIIVGYAQNGYGAEALQIFRKML 480



 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 53/174 (30%), Positives = 88/174 (50%), Gaps = 7/174 (4%)
 Frame = +1

Query: 223 PESDIFVGNSLVDMYTKCGLIEDGYRVFESMSEHDQVSWNAMIVGYAQNGKGSEALALFS 402
           P+ + F  NSL+ + TK G +++  R+F SM E DQ SWN+M+ G+AQ+ +  E+L  F 
Sbjct: 77  PQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFV 136

Query: 403 RMLRSGERPDHVMMIGVLSACSHAGMVEEGQRYFYSMTQEHGLVPSKDHY-------TCM 561
           +M R     +       LSAC  AG+++         TQ H LV SK  Y       + +
Sbjct: 137 KMHREDFLLNEYSFGSALSAC--AGLMDLNMG-----TQVHALV-SKSRYSTDVYMGSAL 188

Query: 562 VDLLGRAGCVREAKKFIESMPMEADTVLWGSLLASCKVHGNLEMGTHVAEKLLE 723
           +D+  + G V  A++    M +E + V W SL+   + +G       V  ++++
Sbjct: 189 IDMYSKCGSVACAEEVFSGM-IERNLVTWNSLITCYEQNGPASEALEVFVRMMD 241


>ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355491679|gb|AES72882.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 705

 Score =  423 bits (1088), Expect = e-116
 Identities = 203/280 (72%), Positives = 230/280 (82%)
 Frame = +1

Query: 1    KNVVSWNALIAGYAQNGENEEALELFCRLKRESIWPTHYTFGNVXXXXXXXXXXQLGKQA 180
            +NVVSWNALIAGY QNGENEEA+ LF  LKRESIWPTHYTFGN+          +LG+QA
Sbjct: 348  RNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQA 407

Query: 181  HTHVLKHGIRFVSGPESDIFVGNSLVDMYTKCGLIEDGYRVFESMSEHDQVSWNAMIVGY 360
            HTH+LKHG  F SG +SDIFVGNSL+DMY KCGL+EDG  VFE M E D VSWNAMIVGY
Sbjct: 408  HTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGY 467

Query: 361  AQNGKGSEALALFSRMLRSGERPDHVMMIGVLSACSHAGMVEEGQRYFYSMTQEHGLVPS 540
            AQNG G+EAL +F  ML SGERPDHV MIGVLSACSHAG+VEEG+ YF SMT EHGLVP 
Sbjct: 468  AQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPV 527

Query: 541  KDHYTCMVDLLGRAGCVREAKKFIESMPMEADTVLWGSLLASCKVHGNLEMGTHVAEKLL 720
            KDHYTCMVDLLGRAGC+ EA   I++MPME D V+WGSLLA+CKVHGN+ +G +VAE+LL
Sbjct: 528  KDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLL 587

Query: 721  ELDPSNSGPYVLLSNMYAELKQWGEVARVRTLMRRRGVVK 840
            E+DP NSGPYVLLSNMYAEL +W +V RVR  MR+ GV+K
Sbjct: 588  EIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVIK 627



 Score =  117 bits (293), Expect = 3e-24
 Identities = 78/281 (27%), Positives = 128/281 (45%), Gaps = 7/281 (2%)
 Frame = +1

Query: 13  SWNALIAGYAQNGENEEALELFCRLKRESIWPTHYTFGNVXXXXXXXXXXQLGKQAHTHV 192
           SWNA+++G+AQ    EEAL     +  E      Y+FG+            +G Q H  +
Sbjct: 118 SWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLI 177

Query: 193 LKHGIRFVSGPESDIFVGNSLVDMYTKCGLIEDGYRVFESMSEHDQVSWNAMIVGYAQNG 372
            K      S    D+++G++LVDMY+KC ++    R F+ M   + VSWN++I  Y QNG
Sbjct: 178 AK------SRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNG 231

Query: 373 KGSEALALFSRMLRSGERPDHVMMIGVLSACSHAGMVEEGQRYFYSMTQEHGLVPSKDHY 552
              +AL +F RM+  G  PD + +  V SAC+    + EG        Q H  V   D Y
Sbjct: 232 PAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREG-------LQIHARVMKHDKY 284

Query: 553 -------TCMVDLLGRAGCVREAKKFIESMPMEADTVLWGSLLASCKVHGNLEMGTHVAE 711
                    +VD+  +   V EA+   + MP+  D V   S+++      +++    +  
Sbjct: 285 RNDLVLGNALVDMYAKCRRVNEARLVFDRMPLR-DVVSETSMVSGYAKASSVKAARLMFS 343

Query: 712 KLLELDPSNSGPYVLLSNMYAELKQWGEVARVRTLMRRRGV 834
            ++E    N   +  L   Y +  +  E  R+  L++R  +
Sbjct: 344 NMME---RNVVSWNALIAGYTQNGENEEAVRLFLLLKRESI 381



 Score =  112 bits (279), Expect = 1e-22
 Identities = 83/286 (29%), Positives = 127/286 (44%), Gaps = 37/286 (12%)
 Frame = +1

Query: 1    KNVVSWNALIAGYAQNGENEEALELFCRLKRESIWPTHYTFGNVXXXXXXXXXXQLGKQA 180
            +N+VSWN+LI  Y QNG   +ALE+F R+    I P   T  +V          + G Q 
Sbjct: 215  RNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQI 274

Query: 181  HTHVLKHGIRFVSGPESDIFVGNSLVDMYTKCGLIED---------------------GY 297
            H  V+KH         +D+ +GN+LVDMY KC  + +                     GY
Sbjct: 275  HARVMKH-----DKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGY 329

Query: 298  R----------VFESMSEHDQVSWNAMIVGYAQNGKGSEALALFSRMLRSGERPDHVMMI 447
                       +F +M E + VSWNA+I GY QNG+  EA+ LF  + R    P H    
Sbjct: 330  AKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFG 389

Query: 448  GVLSACSHAGMVEEGQRYFYSMTQEHGL----VPSKDHY--TCMVDLLGRAGCVREAKKF 609
             +L+AC++   ++ G R  ++   +HG         D +    ++D+  + G V + +  
Sbjct: 390  NLLNACANLADLKLG-RQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLV 448

Query: 610  IESMPMEADTVLWGSLLASCKVHGNLEMGTHVAEKLLELDPSNSGP 747
             E M +E D V W +++     +G    GT   E   E+  S   P
Sbjct: 449  FERM-LERDNVSWNAMIVGYAQNG---YGTEALEIFREMLVSGERP 490



 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 53/189 (28%), Positives = 80/189 (42%), Gaps = 38/189 (20%)
 Frame = +1

Query: 229 SDIFVGNSLVDMYTKCGLIEDGYRVFESMS------------------------------ 318
           S+IF+ N LVD+Y KCG +ED  +VF+ M                               
Sbjct: 52  SEIFIQNRLVDVYGKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCM 111

Query: 319 -EHDQVSWNAMIVGYAQNGKGSEALALFSRMLRSGERPDHVMMIGVLSACSHAGMVEEGQ 495
            E DQ SWNAM+ G+AQ  +  EAL     M       +       LSAC  AG+++   
Sbjct: 112 PERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSAC--AGLMD--- 166

Query: 496 RYFYSMTQEHGLVPSKDHY-------TCMVDLLGRAGCVREAKKFIESMPMEADTVLWGS 654
                  Q HGL+ +K  Y       + +VD+  +   V  A++  + M +  + V W S
Sbjct: 167 --LSIGVQIHGLI-AKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVR-NIVSWNS 222

Query: 655 LLASCKVHG 681
           L+   + +G
Sbjct: 223 LITCYEQNG 231


>ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like
            [Glycine max]
          Length = 705

 Score =  417 bits (1071), Expect = e-114
 Identities = 198/280 (70%), Positives = 230/280 (82%)
 Frame = +1

Query: 1    KNVVSWNALIAGYAQNGENEEALELFCRLKRESIWPTHYTFGNVXXXXXXXXXXQLGKQA 180
            KNVVSWNALIAGY QNGENEEA+ LF  LKRESIWPTHYTFGN+          +LG+QA
Sbjct: 348  KNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQA 407

Query: 181  HTHVLKHGIRFVSGPESDIFVGNSLVDMYTKCGLIEDGYRVFESMSEHDQVSWNAMIVGY 360
            HT +LKHG  F SG ESDIFVGNSL+DMY KCG++EDG  VFE M E D VSWNAMIVGY
Sbjct: 408  HTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGY 467

Query: 361  AQNGKGSEALALFSRMLRSGERPDHVMMIGVLSACSHAGMVEEGQRYFYSMTQEHGLVPS 540
            AQNG G+ AL +F +ML SG++PDHV MIGVLSACSHAG+VEEG+RYF+SM  E GL P 
Sbjct: 468  AQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPM 527

Query: 541  KDHYTCMVDLLGRAGCVREAKKFIESMPMEADTVLWGSLLASCKVHGNLEMGTHVAEKLL 720
            KDH+TCMVDLLGRAGC+ EA   I++MPM+ D V+WGSLLA+CKVHGN+E+G +VAEKL+
Sbjct: 528  KDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLLAACKVHGNIELGKYVAEKLM 587

Query: 721  ELDPSNSGPYVLLSNMYAELKQWGEVARVRTLMRRRGVVK 840
            E+DP NSGPYVLLSNMYAEL +W +V RVR  MR+RGV+K
Sbjct: 588  EIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQRGVIK 627



 Score =  120 bits (302), Expect = 3e-25
 Identities = 68/212 (32%), Positives = 109/212 (51%), Gaps = 7/212 (3%)
 Frame = +1

Query: 13  SWNALIAGYAQNGENEEALELFCRLKRESIWPTHYTFGNVXXXXXXXXXXQLGKQAHTHV 192
           SWNA+++G+AQ+   EEAL  F  +  E      Y+FG+            +G Q H  +
Sbjct: 118 SWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALI 177

Query: 193 LKHGIRFVSGPESDIFVGNSLVDMYTKCGLIEDGYRVFESMSEHDQVSWNAMIVGYAQNG 372
            K   R++     D+++G++LVDMY+KCG++    R F+ M+  + VSWN++I  Y QNG
Sbjct: 178 SKS--RYLL----DVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNG 231

Query: 373 KGSEALALFSRMLRSGERPDHVMMIGVLSACSHAGMVEEGQRYFYSMTQEHGLVPSKDHY 552
              +AL +F  M+ +G  PD + +  V+SAC+    + EG        Q H  V  +D Y
Sbjct: 232 PAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREG-------LQIHARVVKRDKY 284

Query: 553 -------TCMVDLLGRAGCVREAKKFIESMPM 627
                    +VD+  +   V EA+   + MP+
Sbjct: 285 RNDLVLGNALVDMYAKCRRVNEARLVFDRMPL 316



 Score =  103 bits (257), Expect = 5e-20
 Identities = 76/277 (27%), Positives = 121/277 (43%), Gaps = 37/277 (13%)
 Frame = +1

Query: 1    KNVVSWNALIAGYAQNGENEEALELFCRLKRESIWPTHYTFGNVXXXXXXXXXXQLGKQA 180
            +N+VSWN+LI  Y QNG   +ALE+F  +    + P   T  +V          + G Q 
Sbjct: 215  RNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQI 274

Query: 181  HTHVLKHGIRFVSGPESDIFVGNSLVDMYTKCGLIED---------------------GY 297
            H  V+K          +D+ +GN+LVDMY KC  + +                     GY
Sbjct: 275  HARVVKR-----DKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGY 329

Query: 298  R----------VFESMSEHDQVSWNAMIVGYAQNGKGSEALALFSRMLRSGERPDHVMMI 447
                       +F +M E + VSWNA+I GY QNG+  EA+ LF  + R    P H    
Sbjct: 330  ARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFG 389

Query: 448  GVLSACSHAGMVEEGQRYFYSMTQEHGL----VPSKDHY--TCMVDLLGRAGCVREAKKF 609
             +L+AC++   ++ G R  ++   +HG         D +    ++D+  + G V +    
Sbjct: 390  NLLNACANLADLKLG-RQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLV 448

Query: 610  IESMPMEADTVLWGSLLASCKVHGNLEMGTHVAEKLL 720
             E M +E D V W +++     +G       +  K+L
Sbjct: 449  FERM-VERDVVSWNAMIVGYAQNGYGTNALEIFRKML 484



 Score = 69.7 bits (169), Expect = 8e-10
 Identities = 52/199 (26%), Positives = 93/199 (46%), Gaps = 7/199 (3%)
 Frame = +1

Query: 223 PESDIFVGNSLVDMYTKCGLIEDGYRVFESMSEHDQVSWNAMIVGYAQNGKGSEALALFS 402
           P+ + F  N+++ + TK G +++ + VF+SM E DQ SWNAM+ G+AQ+ +  EAL  F 
Sbjct: 81  PQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFV 140

Query: 403 RMLRSGERPDHVMMIGVLSACSHAGMVEEGQRYFYSMTQEHGLVPSKDHY-------TCM 561
            M       +       LSAC+    +  G        Q H L+ SK  Y       + +
Sbjct: 141 DMHSEDFVLNEYSFGSALSACAGLTDLNMG-------IQIHALI-SKSRYLLDVYMGSAL 192

Query: 562 VDLLGRAGCVREAKKFIESMPMEADTVLWGSLLASCKVHGNLEMGTHVAEKLLELDPSNS 741
           VD+  + G V  A++  + M +  + V W SL+   + +G    G  +   ++ +D    
Sbjct: 193 VDMYSKCGVVACAQRAFDGMAVR-NIVSWNSLITCYEQNG--PAGKALEVFVMMMDNGVE 249

Query: 742 GPYVLLSNMYAELKQWGEV 798
              + L+++ +    W  +
Sbjct: 250 PDEITLASVVSACASWSAI 268


>ref|XP_002310520.1| predicted protein [Populus trichocarpa] gi|222853423|gb|EEE90970.1|
            predicted protein [Populus trichocarpa]
          Length = 710

 Score =  414 bits (1063), Expect = e-113
 Identities = 193/280 (68%), Positives = 229/280 (81%)
 Frame = +1

Query: 1    KNVVSWNALIAGYAQNGENEEALELFCRLKRESIWPTHYTFGNVXXXXXXXXXXQLGKQA 180
            K++VSWNALIAGY QNGENEEAL LF  LKRES+ PTHYTFGN+          +LG+QA
Sbjct: 353  KDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQA 412

Query: 181  HTHVLKHGIRFVSGPESDIFVGNSLVDMYTKCGLIEDGYRVFESMSEHDQVSWNAMIVGY 360
            H+HV+KHG RF SG E DIFVGNSL+DMY KCG +E+G RVFE+M E D VSWN MI+GY
Sbjct: 413  HSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGY 472

Query: 361  AQNGKGSEALALFSRMLRSGERPDHVMMIGVLSACSHAGMVEEGQRYFYSMTQEHGLVPS 540
            AQNG G EAL LF +ML SGE+PDHV MIG L ACSHAG+VEEG+RYF+SMT+EHGL+P 
Sbjct: 473  AQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPV 532

Query: 541  KDHYTCMVDLLGRAGCVREAKKFIESMPMEADTVLWGSLLASCKVHGNLEMGTHVAEKLL 720
            KDHYTCMVDLLGRAGC+ EAK  IESMP + D V+W SLL++CKVH N+ +G +VAEK+ 
Sbjct: 533  KDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVHRNITLGKYVAEKIF 592

Query: 721  ELDPSNSGPYVLLSNMYAELKQWGEVARVRTLMRRRGVVK 840
            E+DP++SGPYVLL+NMY+EL +WG+   VR LMRRRGVVK
Sbjct: 593  EIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRRRGVVK 632



 Score =  131 bits (330), Expect = 2e-28
 Identities = 82/248 (33%), Positives = 120/248 (48%), Gaps = 10/248 (4%)
 Frame = +1

Query: 1   KNVVSWNALIAGYAQNGENEEALELFCRLKRESIWPTHYTFGNVXXXXXXXXXXQLGKQA 180
           K+  SWN++IAG+AQ+   EEAL+ F R+ R+      Y+FG+           +LG Q 
Sbjct: 119 KDQCSWNSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQI 178

Query: 181 HTHVLKHGIRFVSGPESDIFVGNSLVDMYTKCGLIEDGYRVFESMSEHDQVSWNAMIVGY 360
           H  + K      S    D+F+G+ L+D Y+KCGL+    RVF+ M E + VSWN +I  Y
Sbjct: 179 HGLISK------SKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCY 232

Query: 361 AQNGKGSEALALFSRMLRSGERPDHVMMIGVLSACSHAGMVEEGQRYFYSMTQEHGLVPS 540
            QNG   EAL  F RM   G +PD V +  V+SAC+     +EG        Q H  V  
Sbjct: 233 EQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEG-------VQIHARVVK 285

Query: 541 KDHY-------TCMVDLLGRAGCVREAKKFIESMPME---ADTVLWGSLLASCKVHGNLE 690
            D +         +VD+  + G V EA+   + MP+    ++T +      S  V     
Sbjct: 286 SDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARS 345

Query: 691 MGTHVAEK 714
           M   + +K
Sbjct: 346 MFATIKQK 353



 Score =  114 bits (285), Expect = 3e-23
 Identities = 85/278 (30%), Positives = 122/278 (43%), Gaps = 37/278 (13%)
 Frame = +1

Query: 1    KNVVSWNALIAGYAQNGENEEALELFCRLKRESIWPTHYTFGNVXXXXXXXXXXQLGKQA 180
            KNVVSWN LI  Y QNG   EALE F R+      P   T  +V          + G Q 
Sbjct: 220  KNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQI 279

Query: 181  HTHVLKHGIRFVSGPESDIFVGNSLVDMYTKCGLIEDGYRVFESM--------------- 315
            H  V+K   +F     +D+ +GN+LVDMY KCG + +   VF+ M               
Sbjct: 280  HARVVKSD-KF----RNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGY 334

Query: 316  ----------------SEHDQVSWNAMIVGYAQNGKGSEALALFSRMLRSGERPDHVMMI 447
                             + D VSWNA+I GY QNG+  EAL LF  + R    P H    
Sbjct: 335  AKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFG 394

Query: 448  GVLSACSHAGMVEEGQRYFYSMTQEHGL------VPSKDHYTCMVDLLGRAGCVREAKKF 609
             +L+A ++   +E G R  +S   +HG        P       ++D+  + G V E  + 
Sbjct: 395  NLLNASANLADLELG-RQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRV 453

Query: 610  IESMPMEADTVLWGSLLASCKVHGNLEMGTHVAEKLLE 723
             E+M +E D V W +++     +G       + +K+LE
Sbjct: 454  FENM-VEKDHVSWNTMIIGYAQNGYGMEALELFQKMLE 490



 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 7/159 (4%)
 Frame = +1

Query: 226 ESDIFVGNSLVDMYTKCGLIEDGYRVFESMSEHDQVSWNAMIVGYAQNGKGSEALALFSR 405
           E ++F  NS++    + G +++   +F  M E DQ SWN+MI G+AQ+ +  EAL  F R
Sbjct: 87  ERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVR 146

Query: 406 MLRSGERPDHVMMIGVLSACSHAGMVEEGQRYFYSMTQEHGLVPSKDHYTC-------MV 564
           M R     +       LSACS    ++ G        Q HGL+ SK  Y+        ++
Sbjct: 147 MHRDDFVLNDYSFGSGLSACSRLKDLKLG-------AQIHGLI-SKSKYSLDVFMGSGLI 198

Query: 565 DLLGRAGCVREAKKFIESMPMEADTVLWGSLLASCKVHG 681
           D   + G V  A++  + M  E + V W  L+   + +G
Sbjct: 199 DFYSKCGLVGCARRVFDGME-EKNVVSWNCLITCYEQNG 236


>ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At2g13600 gi|4558664|gb|AAD22682.1| hypothetical protein
            [Arabidopsis thaliana] gi|330251150|gb|AEC06244.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 697

 Score =  401 bits (1030), Expect = e-109
 Identities = 189/280 (67%), Positives = 220/280 (78%)
 Frame = +1

Query: 1    KNVVSWNALIAGYAQNGENEEALELFCRLKRESIWPTHYTFGNVXXXXXXXXXXQLGKQA 180
            +NVVSWNALIAGY QNGENEEAL LFC LKRES+ PTHY+F N+           LG QA
Sbjct: 349  RNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQA 408

Query: 181  HTHVLKHGIRFVSGPESDIFVGNSLVDMYTKCGLIEDGYRVFESMSEHDQVSWNAMIVGY 360
            H HVLKHG +F SG E DIFVGNSL+DMY KCG +E+GY VF  M E D VSWNAMI+G+
Sbjct: 409  HVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGF 468

Query: 361  AQNGKGSEALALFSRMLRSGERPDHVMMIGVLSACSHAGMVEEGQRYFYSMTQEHGLVPS 540
            AQNG G+EAL LF  ML SGE+PDH+ MIGVLSAC HAG VEEG+ YF SMT++ G+ P 
Sbjct: 469  AQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPL 528

Query: 541  KDHYTCMVDLLGRAGCVREAKKFIESMPMEADTVLWGSLLASCKVHGNLEMGTHVAEKLL 720
            +DHYTCMVDLLGRAG + EAK  IE MPM+ D+V+WGSLLA+CKVH N+ +G +VAEKLL
Sbjct: 529  RDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLL 588

Query: 721  ELDPSNSGPYVLLSNMYAELKQWGEVARVRTLMRRRGVVK 840
            E++PSNSGPYVLLSNMYAEL +W +V  VR  MR+ GV K
Sbjct: 589  EVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTK 628



 Score =  126 bits (317), Expect = 5e-27
 Identities = 75/244 (30%), Positives = 120/244 (49%), Gaps = 10/244 (4%)
 Frame = +1

Query: 13  SWNALIAGYAQNGENEEALELFCRLKRESIWPTHYTFGNVXXXXXXXXXXQLGKQAHTHV 192
           +WN++++G+AQ+   EEAL  F  + +E      Y+F +V            G Q H+ +
Sbjct: 119 TWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLI 178

Query: 193 LKHGIRFVSGPESDIFVGNSLVDMYTKCGLIEDGYRVFESMSEHDQVSWNAMIVGYAQNG 372
            K          SD+++G++LVDMY+KCG + D  RVF+ M + + VSWN++I  + QNG
Sbjct: 179 AKSPFL------SDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNG 232

Query: 373 KGSEALALFSRMLRSGERPDHVMMIGVLSACSHAGMVEEGQRYFYSMTQEHGLVPSKDHY 552
              EAL +F  ML S   PD V +  V+SAC+    ++ GQ       + HG V   D  
Sbjct: 233 PAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQ-------EVHGRVVKNDKL 285

Query: 553 -------TCMVDLLGRAGCVREAKKFIESMPME---ADTVLWGSLLASCKVHGNLEMGTH 702
                     VD+  +   ++EA+   +SMP+    A+T +      +        M T 
Sbjct: 286 RNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTK 345

Query: 703 VAEK 714
           +AE+
Sbjct: 346 MAER 349



 Score =  110 bits (276), Expect = 3e-22
 Identities = 76/277 (27%), Positives = 118/277 (42%), Gaps = 36/277 (12%)
 Frame = +1

Query: 1    KNVVSWNALIAGYAQNGENEEALELFCRLKRESIWPTHYTFGNVXXXXXXXXXXQLGKQA 180
            +NVVSWN+LI  + QNG   EAL++F  +    + P   T  +V          ++G++ 
Sbjct: 216  RNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEV 275

Query: 181  HTHVLKHGIRFVSGPESDIFVGNSLVDMYTKCGLIEDGYRVFESM--------------- 315
            H  V+K+         +DI + N+ VDMY KC  I++   +F+SM               
Sbjct: 276  HGRVVKN-----DKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGY 330

Query: 316  ----------------SEHDQVSWNAMIVGYAQNGKGSEALALFSRMLRSGERPDHVMMI 447
                            +E + VSWNA+I GY QNG+  EAL+LF  + R    P H    
Sbjct: 331  AMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFA 390

Query: 448  GVLSACS-----HAGMVEEGQRYFYSMTQEHGLVPSKDHYTCMVDLLGRAGCVREAKKFI 612
             +L AC+     H GM        +    + G          ++D+  + GCV E     
Sbjct: 391  NILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVF 450

Query: 613  ESMPMEADTVLWGSLLASCKVHGNLEMGTHVAEKLLE 723
              M ME D V W +++     +G       +  ++LE
Sbjct: 451  RKM-MERDCVSWNAMIIGFAQNGYGNEALELFREMLE 486



 Score = 83.2 bits (204), Expect = 7e-14
 Identities = 62/221 (28%), Positives = 99/221 (44%), Gaps = 37/221 (16%)
 Frame = +1

Query: 172 KQAHTHVLKHGIRFVSGPESDIFVGNSLVDMYTKCGLIEDGYRVFE-------------- 309
           +  H  V+K      SG  ++IF+ N L+D Y+KCG +EDG +VF+              
Sbjct: 40  RYVHASVIK------SGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVV 93

Query: 310 -----------------SMSEHDQVSWNAMIVGYAQNGKGSEALALFSRMLRSGERPDHV 438
                            SM E DQ +WN+M+ G+AQ+ +  EAL  F+ M + G   +  
Sbjct: 94  TGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEY 153

Query: 439 MMIGVLSACSHAGMVEEGQRYFYSMTQEHGLVPS----KDHY--TCMVDLLGRAGCVREA 600
               VLSACS    + +G        Q H L+       D Y  + +VD+  + G V +A
Sbjct: 154 SFASVLSACSGLNDMNKG-------VQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDA 206

Query: 601 KKFIESMPMEADTVLWGSLLASCKVHGNLEMGTHVAEKLLE 723
           ++  + M  + + V W SL+   + +G       V + +LE
Sbjct: 207 QRVFDEMG-DRNVVSWNSLITCFEQNGPAVEALDVFQMMLE 246