BLASTX nr result

ID: Coptis24_contig00015412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015412
         (2269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283376.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   723   0.0  
ref|XP_004145492.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   700   0.0  
ref|XP_002515408.1| Ubiquitin carboxyl-terminal hydrolase, putat...   679   0.0  
emb|CBI21158.3| unnamed protein product [Vitis vinifera]              668   0.0  
ref|XP_003544592.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   641   0.0  

>ref|XP_002283376.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Vitis
            vinifera]
          Length = 553

 Score =  723 bits (1865), Expect = 0.0
 Identities = 357/561 (63%), Positives = 428/561 (76%), Gaps = 6/561 (1%)
 Frame = -1

Query: 2056 MSNRNPTYTNPLPCSHLITYKQKNGFTGYKFLQTSLKTSPNGRASM--YNREKNKCSFCD 1883
            MS +NP+YTNP PC HL  YK ++G  G+K LQ  LKT+P GR S+  +  E  +CS C 
Sbjct: 1    MSKQNPSYTNPKPCKHLADYKLRHGLNGFKTLQNCLKTTPYGRTSVSKHKSETPRCSLCF 60

Query: 1882 VCQNGRMYYCLVCYSVSCSNHASENG---HGHEIGIDMERAELFCFVCCDQVYDPDFDKA 1712
              Q GR+Y+CL+C S++CS+HA+E+    HGHEI +D+ERAEL+C VC DQVYDPDFD+A
Sbjct: 61   GYQ-GRLYFCLICSSITCSSHANEHSQSHHGHEIAVDVERAELYCCVCRDQVYDPDFDRA 119

Query: 1711 VMCKQIMELPRNSNGVDXXXXXXXXXXXXXXXXXXLGSLESGSTKNPIKLVLKIRRGSSS 1532
            V+ K  M++P N NGV+                     LE   +K   +L+    R + S
Sbjct: 120  VVSKHFMDMPSNVNGVEGVVEESNKRRRLGLGL----ELEWKRSK---RLISMADRRAKS 172

Query: 1531 MFPWGLRGLSNLGNTCFMNSVLQALLHTPPLRNYFLSGRHNHETCMKTPTDRLCLHCDIN 1352
            +FP GLRGL+NLGNTCFMNSVLQAL H PPLRNYFLS RHN ++C +  +DRLCL CDI+
Sbjct: 173  IFPLGLRGLNNLGNTCFMNSVLQALFHAPPLRNYFLSDRHNRQSCRRRSSDRLCLPCDID 232

Query: 1351 AIFTAVFSGDRKPYSPAQFLYSWWQHSANLASYEQQDAHEFFISVLDRIHEREERTKPKS 1172
             IF+AVFSGDR PYSPA+FLYSWWQHS NLASYEQQDAHEFFIS+LD+IH +E ++  + 
Sbjct: 233  VIFSAVFSGDRTPYSPARFLYSWWQHSENLASYEQQDAHEFFISMLDQIHVKEGKSGNQD 292

Query: 1171 KDSGDCQCIAHRVFSGVLRSDVXXXXXXXXXXTYDPCLDISLNLETANIFSKGVSEKSGK 992
            KD+ DCQCIAH+ FSG+LRSDV          TYDPC+DISLNL+ +   S G++ ++ K
Sbjct: 293  KDNRDCQCIAHKAFSGLLRSDVTCTTCGFTSTTYDPCVDISLNLDMSFCPSTGMTNRTTK 352

Query: 991  TSQDTSISTLLGCLDLFTRPEKLGSDQKLYCQHCQVRRDSLKQMSIRRLPSVLCFHMKRF 812
             +++  ISTLLGCLDLFTRPEKLG DQKLYCQ+CQ RR+SLKQMSIRRLP VLC H+KRF
Sbjct: 353  PNENAIISTLLGCLDLFTRPEKLGPDQKLYCQNCQERRNSLKQMSIRRLPIVLCLHIKRF 412

Query: 811  EHSLIRKKSRKIDRYLQFPFSLDMTPYLSSSIVRNRFGNRIFAFEGDESDISTEFEVFAV 632
            EHS IRK SRKID+YLQFPFSLDMTPYLSSSIVRNRFGNRIF FEGDES+  TEFEVFAV
Sbjct: 413  EHSTIRKMSRKIDQYLQFPFSLDMTPYLSSSIVRNRFGNRIFTFEGDESETCTEFEVFAV 472

Query: 631  VTHSGNLESGHYVTYLRLRNQWYKCDDAWITQVSDGVVRASQGYLLYYVQKTPCYKASED 452
            VTHSG LESGHYVTY+R+RN+WYKCDDAWIT+V +GVVRASQ YL+YYVQK   YKASED
Sbjct: 473  VTHSGMLESGHYVTYVRVRNRWYKCDDAWITEVDEGVVRASQCYLMYYVQKGFYYKASED 532

Query: 451  LSC-PQQSPRHDPFVPTPGCC 392
            LSC P   P  + ++P  GCC
Sbjct: 533  LSCLPMSPPGGESYLPIAGCC 553


>ref|XP_004145492.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
            sativus] gi|449515075|ref|XP_004164575.1| PREDICTED:
            ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
            sativus]
          Length = 552

 Score =  700 bits (1806), Expect = 0.0
 Identities = 342/560 (61%), Positives = 417/560 (74%), Gaps = 5/560 (0%)
 Frame = -1

Query: 2056 MSNRNPTYTNPLPCSHLITYKQKNGFTGYKFLQTSLKTSPNGRASMYNREKN--KCSFCD 1883
            MS RNP+Y+NP PC+HL  YK + G  GYK +Q  LKTSPNGR S+ N +    +C  CD
Sbjct: 1    MSQRNPSYSNPTPCNHLADYKLRYGLNGYKSIQNHLKTSPNGRTSIQNPDSKLPRCGSCD 60

Query: 1882 VCQNGRMYYCLVCYSVSCSNHAS---ENGHGHEIGIDMERAELFCFVCCDQVYDPDFDKA 1712
              + GR+Y CL+C S+SCSNH     ++ +GH++ +D+ERAEL+C+ C DQVYDPDFD+ 
Sbjct: 61   GYK-GRLYICLICASISCSNHTLLHYQSENGHDLAVDVERAELYCYACSDQVYDPDFDRT 119

Query: 1711 VMCKQIMELPRNSNGVDXXXXXXXXXXXXXXXXXXLGSLESGSTKNPIKLVLKIRRGSSS 1532
            VM K I+ +P  S                       GS++    KN   L+    + S S
Sbjct: 120  VMSKHIV-VPEKSKSQSESIGERSSKRRRL------GSVDLLDLKNLKPLISVKDQRSKS 172

Query: 1531 MFPWGLRGLSNLGNTCFMNSVLQALLHTPPLRNYFLSGRHNHETCMKTPTDRLCLHCDIN 1352
             +P GLRGL+NLGNTCFMNSVLQ  LHTPPL NYFL+ +HN ETC K P  +LCL CDI+
Sbjct: 173  CYPLGLRGLNNLGNTCFMNSVLQVFLHTPPLSNYFLNDQHNRETCSKRPIGQLCLPCDID 232

Query: 1351 AIFTAVFSGDRKPYSPAQFLYSWWQHSANLASYEQQDAHEFFISVLDRIHEREERTKPKS 1172
             IF+AVFSGD  PYSPAQFLYSWWQHSANLA YEQQDAHEFFISVLDRIHERE +++ + 
Sbjct: 233  CIFSAVFSGDHMPYSPAQFLYSWWQHSANLACYEQQDAHEFFISVLDRIHERERKSRSQD 292

Query: 1171 KDSGDCQCIAHRVFSGVLRSDVXXXXXXXXXXTYDPCLDISLNLETANIFSKGVSEKSGK 992
            K++GDC+CIAHR FSG LRSDV          TYDPC+DISL+L+T +  S+ ++ K  K
Sbjct: 293  KENGDCKCIAHRAFSGQLRSDVTCMTCGFTSTTYDPCVDISLDLDTQDFSSRNIAGKLTK 352

Query: 991  TSQDTSISTLLGCLDLFTRPEKLGSDQKLYCQHCQVRRDSLKQMSIRRLPSVLCFHMKRF 812
             +  +S STL GCLDLFTRPEKLGSDQKL+CQ+CQ +R+S+KQMSIRRLP VLC H+KRF
Sbjct: 353  PADFSSKSTLSGCLDLFTRPEKLGSDQKLFCQNCQEKRNSVKQMSIRRLPLVLCLHIKRF 412

Query: 811  EHSLIRKKSRKIDRYLQFPFSLDMTPYLSSSIVRNRFGNRIFAFEGDESDISTEFEVFAV 632
            EHS IR+ SRKIDRYLQFPFSLDM PYLSSSI+RNRFGNRIFA EGDE D S++FE+FAV
Sbjct: 413  EHSFIRRTSRKIDRYLQFPFSLDMIPYLSSSIIRNRFGNRIFASEGDELDASSKFEIFAV 472

Query: 631  VTHSGNLESGHYVTYLRLRNQWYKCDDAWITQVSDGVVRASQGYLLYYVQKTPCYKASED 452
            V+HSG LESGHYVTYLRLRN+WYKCDDAWIT+V + +VR SQ Y+++Y+QKT  +K++ED
Sbjct: 473  VSHSGTLESGHYVTYLRLRNRWYKCDDAWITEVDEEMVRNSQCYMMFYLQKTASHKSNED 532

Query: 451  LSCPQQSPRHDPFVPTPGCC 392
            LSC   SPR+D F    GCC
Sbjct: 533  LSCLPISPRNDAFQQIAGCC 552


>ref|XP_002515408.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
            gi|223545352|gb|EEF46857.1| Ubiquitin carboxyl-terminal
            hydrolase, putative [Ricinus communis]
          Length = 551

 Score =  679 bits (1751), Expect = 0.0
 Identities = 335/560 (59%), Positives = 411/560 (73%), Gaps = 5/560 (0%)
 Frame = -1

Query: 2056 MSNRNPTYTNPLPCSHLITYKQKNGFTGYKFLQTSLKTSPNGRASMYNREKN--KCSFCD 1883
            M+  NP YTNP  C HL  YK ++G +GYKFLQ  LKT+P+G  S+Y  +    +CSFC 
Sbjct: 1    MATSNPLYTNPKLCKHLADYKLRHGLSGYKFLQNCLKTTPSGITSVYKSDTKIPRCSFCK 60

Query: 1882 VCQNGRMYYCLVCYSVSCSNHA---SENGHGHEIGIDMERAELFCFVCCDQVYDPDFDKA 1712
              Q GR + CL+C S+SCS+H    +++ + H+I +D+ER+EL+C +C DQVYDPDFDK 
Sbjct: 61   GYQ-GRFFMCLICSSISCSSHTLLHAQSENSHDIAVDIERSELYCSLCSDQVYDPDFDKV 119

Query: 1711 VMCKQIMELPRNSNGVDXXXXXXXXXXXXXXXXXXLGSLESGSTKNPIKLVLKIRRGSSS 1532
            V+ K ++++P N++ VD                    SL     K   +LVL   R   S
Sbjct: 120  VVSKVMLDMPNNAHIVDDGIRRSSKRRKL-------NSLMELDLKKSKQLVLMRDRREKS 172

Query: 1531 MFPWGLRGLSNLGNTCFMNSVLQALLHTPPLRNYFLSGRHNHETCMKTPTDRLCLHCDIN 1352
             +P GLRGL+NLG+TCFMNSVLQALLH PP RNYFLS RH+ +TC K   DRLCL C+I+
Sbjct: 173  CYPLGLRGLNNLGSTCFMNSVLQALLHAPPFRNYFLSDRHDRDTCRKRSLDRLCLACNID 232

Query: 1351 AIFTAVFSGDRKPYSPAQFLYSWWQHSANLASYEQQDAHEFFISVLDRIHEREERTKPKS 1172
             I +A++SGDR PYSPAQFLYSWWQHSANLASYEQQDAHEFFI++LD IHE E   +  +
Sbjct: 233  VIISALYSGDRTPYSPAQFLYSWWQHSANLASYEQQDAHEFFIALLDGIHESEGNGRTPN 292

Query: 1171 KDSGDCQCIAHRVFSGVLRSDVXXXXXXXXXXTYDPCLDISLNLETANIFSKGVSEKSGK 992
            KD+GDCQCIAHRVFSG LRSDV          TYDPC+DISL+++T+ + S  V  KS +
Sbjct: 293  KDNGDCQCIAHRVFSGRLRSDVTCMTCGFTSTTYDPCVDISLDMDTS-MSSTDVPNKSVR 351

Query: 991  TSQDTSISTLLGCLDLFTRPEKLGSDQKLYCQHCQVRRDSLKQMSIRRLPSVLCFHMKRF 812
             +++    TL  CLDLFTRPEKLGSDQKLYCQ+C+ +RDS KQMSI+RLP VL  H+KRF
Sbjct: 352  PNENAGKCTLSACLDLFTRPEKLGSDQKLYCQNCEEKRDSFKQMSIKRLPLVLSLHIKRF 411

Query: 811  EHSLIRKKSRKIDRYLQFPFSLDMTPYLSSSIVRNRFGNRIFAFEGDESDISTEFEVFAV 632
            EHS +RK SRKID +LQFPFSLDMT YLSSSI+R RFGNRIFAF+ DE+D S EFE+FAV
Sbjct: 412  EHSPVRKLSRKIDWHLQFPFSLDMTSYLSSSILRKRFGNRIFAFDSDEADTSAEFEIFAV 471

Query: 631  VTHSGNLESGHYVTYLRLRNQWYKCDDAWITQVSDGVVRASQGYLLYYVQKTPCYKASED 452
            +THSG LESGHYVTYLRLRNQWYKCDDAWIT+V + +VRASQ Y+++YVQKT  YKA+ED
Sbjct: 472  ITHSGMLESGHYVTYLRLRNQWYKCDDAWITEVDETIVRASQCYMIFYVQKTHYYKANED 531

Query: 451  LSCPQQSPRHDPFVPTPGCC 392
            LS      R DPF+P  GCC
Sbjct: 532  LSRTSMPQRRDPFIPIAGCC 551


>emb|CBI21158.3| unnamed protein product [Vitis vinifera]
          Length = 529

 Score =  668 bits (1724), Expect = 0.0
 Identities = 337/561 (60%), Positives = 407/561 (72%), Gaps = 6/561 (1%)
 Frame = -1

Query: 2056 MSNRNPTYTNPLPCSHLITYKQKNGFTGYKFLQTSLKTSPNGRASM--YNREKNKCSFCD 1883
            MS +NP+YTNP PC HL  YK ++G  G+K LQ  LKT+P GR S+  +  E  +CS C 
Sbjct: 1    MSKQNPSYTNPKPCKHLADYKLRHGLNGFKTLQNCLKTTPYGRTSVSKHKSETPRCSLCF 60

Query: 1882 VCQNGRMYYCLVCYSVSCSNHASENG---HGHEIGIDMERAELFCFVCCDQVYDPDFDKA 1712
              Q GR+Y+CL+C S++CS+HA+E+    HGHEI +D+ERAEL+C VC DQVYDPDFD+A
Sbjct: 61   GYQ-GRLYFCLICSSITCSSHANEHSQSHHGHEIAVDVERAELYCCVCRDQVYDPDFDRA 119

Query: 1711 VMCKQIMELPRNSNGVDXXXXXXXXXXXXXXXXXXLGSLESGSTKNPIKLVLKIRRGSSS 1532
            V+ K  M++P N NGV+                     LE   +K   +L+    R + S
Sbjct: 120  VVSKHFMDMPSNVNGVEGVVEESNKRRRLGLGL----ELEWKRSK---RLISMADRRAKS 172

Query: 1531 MFPWGLRGLSNLGNTCFMNSVLQALLHTPPLRNYFLSGRHNHETCMKTPTDRLCLHCDIN 1352
            +FP GLRGL+NLGNTCFMNSVLQAL H PPLRNYFLS RHN ++C +  +DRLCL CDI+
Sbjct: 173  IFPLGLRGLNNLGNTCFMNSVLQALFHAPPLRNYFLSDRHNRQSCRRRSSDRLCLPCDID 232

Query: 1351 AIFTAVFSGDRKPYSPAQFLYSWWQHSANLASYEQQDAHEFFISVLDRIHEREERTKPKS 1172
             IF+AVFSGDR PYSPA+FLYSWWQHS NLASYEQQDAHEFFIS+LD+IH +E ++  + 
Sbjct: 233  VIFSAVFSGDRTPYSPARFLYSWWQHSENLASYEQQDAHEFFISMLDQIHVKEGKSGNQD 292

Query: 1171 KDSGDCQCIAHRVFSGVLRSDVXXXXXXXXXXTYDPCLDISLNLETANIFSKGVSEKSGK 992
            KD+ DCQCIAH+ FSG+LRSDV          TYDPC+DISLNL+ +   S G++ ++ K
Sbjct: 293  KDNRDCQCIAHKAFSGLLRSDVTCTTCGFTSTTYDPCVDISLNLDMSFCPSTGMTNRTTK 352

Query: 991  TSQDTSISTLLGCLDLFTRPEKLGSDQKLYCQHCQVRRDSLKQMSIRRLPSVLCFHMKRF 812
             +++  ISTLLGCLDLFTRPEKLG DQKLYCQ+CQ RR+SLKQMSIRRLP VLC H+KRF
Sbjct: 353  PNENAIISTLLGCLDLFTRPEKLGPDQKLYCQNCQERRNSLKQMSIRRLPIVLCLHIKRF 412

Query: 811  EHSLIRKKSRKIDRYLQFPFSLDMTPYLSSSIVRNRFGNRIFAFEGDESDISTEFEVFAV 632
            EHS IRK SRKID+YLQFPFSLDMTPYLSSSI                        VFAV
Sbjct: 413  EHSTIRKMSRKIDQYLQFPFSLDMTPYLSSSI------------------------VFAV 448

Query: 631  VTHSGNLESGHYVTYLRLRNQWYKCDDAWITQVSDGVVRASQGYLLYYVQKTPCYKASED 452
            VTHSG LESGHYVTY+R+RN+WYKCDDAWIT+V +GVVRASQ YL+YYVQK   YKASED
Sbjct: 449  VTHSGMLESGHYVTYVRVRNRWYKCDDAWITEVDEGVVRASQCYLMYYVQKGFYYKASED 508

Query: 451  LSC-PQQSPRHDPFVPTPGCC 392
            LSC P   P  + ++P  GCC
Sbjct: 509  LSCLPMSPPGGESYLPIAGCC 529


>ref|XP_003544592.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Glycine
            max]
          Length = 554

 Score =  641 bits (1653), Expect = 0.0
 Identities = 327/562 (58%), Positives = 403/562 (71%), Gaps = 7/562 (1%)
 Frame = -1

Query: 2056 MSNRNPTYTNPLPCSHLITYKQKNGFTGYKFLQTSLKTSPNGRASMY--NREKNKCSFCD 1883
            M  RNP+YTNP PC HL  YK K+GF GYK +Q  L TSP G+ S+   N +  +C FC+
Sbjct: 1    MLPRNPSYTNPEPCQHLAEYKLKHGFNGYKAIQKLLVTSPIGKTSVKKPNTKVPRCGFCN 60

Query: 1882 VCQNGRMYYCLVCYSVSCSNHA---SENGHGHEIGIDMERAELFCFVCCDQVYDPDFDKA 1712
             C+ GR Y CL+C S SC +H     ++  GH + +D+ER EL+C VC DQ+YDPDFD+ 
Sbjct: 61   GCE-GRFYLCLICSSFSCLDHTLLHPQSESGHAVFVDIERTELYCGVCRDQLYDPDFDQV 119

Query: 1711 VMCKQIMELPRNSNGVDXXXXXXXXXXXXXXXXXXLGSLESGSTKNPIKLVLKIRRGSSS 1532
            VM K  M +   + G +                   G +     K+  ++  K  RG S 
Sbjct: 120  VMSKHSMGVAGGATGNESIGQRLIKRRRLVS-----GIVGLDLQKSKCRVSTKDLRGKSC 174

Query: 1531 MFPWGLRGLSNLGNTCFMNSVLQALLHTPPLRNYFLSGRHNHETCM-KTPTDRLC-LHCD 1358
             +P GLRGL+NLG+TC+MNSVLQ LLH PP R+YFLSG    E C  +  TD +C L CD
Sbjct: 175  -YPLGLRGLNNLGSTCYMNSVLQVLLHAPPFRDYFLSGGQRLEACHHRRATDLMCCLLCD 233

Query: 1357 INAIFTAVFSGDRKPYSPAQFLYSWWQHSANLASYEQQDAHEFFISVLDRIHEREERTKP 1178
            +NAIF+AV+SGDR PYSPAQFLYSWWQHSANLA YEQQDAHEFFIS+LD IHE+E +T+ 
Sbjct: 234  VNAIFSAVYSGDRSPYSPAQFLYSWWQHSANLACYEQQDAHEFFISMLDAIHEKEGKTRN 293

Query: 1177 KSKDSGDCQCIAHRVFSGVLRSDVXXXXXXXXXXTYDPCLDISLNLETANIFSKGVSEKS 998
             SK +GDCQCIAH+VF G+LRSDV          TYDPC+DISLNL+T ++ S    +K 
Sbjct: 294  GSKGNGDCQCIAHKVFYGLLRSDVTCMACGFTSTTYDPCVDISLNLDT-DVSSTEKGKKL 352

Query: 997  GKTSQDTSISTLLGCLDLFTRPEKLGSDQKLYCQHCQVRRDSLKQMSIRRLPSVLCFHMK 818
             K ++D S+STL GCLDLFTRPEKLGSDQKLYCQ+C+ R+DSLKQMSIR+LP VL  H+K
Sbjct: 353  TKQNEDGSMSTLSGCLDLFTRPEKLGSDQKLYCQNCRERQDSLKQMSIRKLPLVLSLHVK 412

Query: 817  RFEHSLIRKKSRKIDRYLQFPFSLDMTPYLSSSIVRNRFGNRIFAFEGDESDISTEFEVF 638
            RFEHS ++K SRKIDRYL FPFSLDMTPYLSSSI+R R+GNR F F GD+SD+ +EFE+F
Sbjct: 413  RFEHSFVKKCSRKIDRYLHFPFSLDMTPYLSSSILRARYGNRNFTFGGDQSDMFSEFEIF 472

Query: 637  AVVTHSGNLESGHYVTYLRLRNQWYKCDDAWITQVSDGVVRASQGYLLYYVQKTPCYKAS 458
            AVVTHSG LESGHYV+++R+RNQWY+C+DAWIT V +  VRASQ Y+++YVQKT   KA+
Sbjct: 473  AVVTHSGTLESGHYVSFVRVRNQWYRCNDAWITVVDEATVRASQCYMIFYVQKTLHNKAN 532

Query: 457  EDLSCPQQSPRHDPFVPTPGCC 392
            EDLS    SP  D F+P  GCC
Sbjct: 533  EDLSHVPNSPGRDLFLPIAGCC 554


Top