BLASTX nr result

ID: Coptis24_contig00015405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015405
         (1450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263304.2| PREDICTED: uncharacterized protein LOC100249...   103   1e-19
emb|CBI41024.3| unnamed protein product [Vitis vinifera]               95   5e-17
ref|XP_002274729.1| PREDICTED: uncharacterized protein LOC100259...    95   5e-17
ref|XP_004160947.1| PREDICTED: uncharacterized protein LOC101230...    94   9e-17
ref|NP_195495.1| uncharacterized protein [Arabidopsis thaliana] ...    92   4e-16

>ref|XP_002263304.2| PREDICTED: uncharacterized protein LOC100249180 [Vitis vinifera]
          Length = 659

 Score =  103 bits (256), Expect = 1e-19
 Identities = 94/375 (25%), Positives = 170/375 (45%), Gaps = 15/375 (4%)
 Frame = +1

Query: 298  VMVHQSVGRNQNPKGFKVKHAFQVSLVLVICIWLLYQIQNSHYKENNFSVPLENKLKNGK 477
            +M  QS  RNQ  KGFKVKHA Q+ L+L ICIWL+YQ+++S+ K+  F    ++   +GK
Sbjct: 1    MMFRQSPRRNQRSKGFKVKHAVQICLLLGICIWLIYQVKSSYEKKAAFD---KSSQISGK 57

Query: 478  VDFGRKVTAGSNVGVEIDFHDGNSIIQHRNV-DDGENGDDHLDQNATEKPQEEPLQQED- 651
            V  G ++        ++   D N  ++ R + DD + G++  ++N TE+   +P + ED 
Sbjct: 58   VQNGNEIP-------KLGRKDLNPQLEERGIKDDMQRGEEEEEENRTEEEPSKPEENEDI 110

Query: 652  ---------SDGIISHNEGNEDEEVENQQKGKLGNEEDKSTLPSDGDDAAELDKEGKDYK 804
                      +G    +  N+ + V+ +++G+   EE + T  S G++  E     K+ K
Sbjct: 111  GKGGGDDEVHEGRTEVDAENKGDSVDGEKEGEDRKEEGEET-ESKGEENEE--SREKETK 167

Query: 805  RVTEENGPELEHEGIDAKDNPIKQHXXXXXXXXXXXXTIGDGDEVRSSVKDRDTKESAEE 984
                E+G + E    D+++N  K+             T+ D +  + + K  +++ES E 
Sbjct: 168  EEESEDGQQKEMRDEDSEENKEKE------------ATVEDSEVSKENEKREESEESKEN 215

Query: 985  KTLSPAEAESNIPADQSETISGINGFHDENGIPPDGLDLENNNVSETSSDDDSATIMKDD 1164
            +    +E       +  ET        +E G        E N      S +D A    D 
Sbjct: 216  EKQEESEDSKEKENENKET-------KEEEG------SEEKNMEGNEGSSEDQANDAHDS 262

Query: 1165 SRAG---KALKVESANSSQA-DSKTRQTVEEGFSSENAVKFDKPGINGSAETTEKGNLVL 1332
            +  G   +  K + A+S  A +++   T  E  +SEN+ + D+P    +  T ++     
Sbjct: 263  NNEGAREEHYKGDDASSEVAHEAQHTTTGTENDASENSNE-DQPDNKNTDGTEQENTANS 321

Query: 1333 EDSNSVLSKHPIEEN 1377
             + + V     ++EN
Sbjct: 322  TEGSEVNQNEAVDEN 336


>emb|CBI41024.3| unnamed protein product [Vitis vinifera]
          Length = 475

 Score = 94.7 bits (234), Expect = 5e-17
 Identities = 93/382 (24%), Positives = 154/382 (40%), Gaps = 23/382 (6%)
 Frame = +1

Query: 301  MVHQSVGRNQNPKGFKVKHAFQVSLVLVICIWLLYQIQNSHYKENNFSVPLENKLKNGKV 480
            M  QS  RNQ  KGFKVKHA Q+ L+L ICIWL+YQ+++S+ K+  F    ++   +GKV
Sbjct: 1    MFRQSPRRNQRSKGFKVKHAVQICLLLGICIWLIYQVKSSYEKKAAFD---KSSQISGKV 57

Query: 481  DFGRKVTAGSNVGVEIDFHDGNSIIQHRNVDDGENGDDHLDQNATEKPQEEPLQQEDSDG 660
              G ++        ++   D N  ++ R + D  + +    +  +E  Q++ ++ EDS+ 
Sbjct: 58   QNGNEIP-------KLGRKDLNPQLEERGIKD--DMEKETKEEESEDGQQKEMRDEDSEE 108

Query: 661  IISHNEGNEDEEVENQQKGKLGNEEDKSTLPSDGDDAAELDKEGKDYKRVTEENGPELEH 840
                    ED EV  + + +  +EE K           E  +E +D K    EN    E 
Sbjct: 109  NKEKEATVEDSEVSKENEKREESEESKEN---------EKQEESEDSKEKENENKETKEE 159

Query: 841  EGIDAKDNPIKQHXXXXXXXXXXXXTIGDGDEVRSSVKDRDTKESAEEKTLSPAEAESNI 1020
            EG + K+    +               G  ++  +   D    E A E+     +A S +
Sbjct: 160  EGSEEKNMEGNE---------------GSSEDQANDAHD-SNNEGAREEHYKGDDASSEV 203

Query: 1021 PADQSETISGINGFHDENGIP-------PDGLDLENNNVSETSS--------DDDSATIM 1155
              +   T +G      EN           DG + EN   S   S        D+++A+I+
Sbjct: 204  AHEAQHTTTGTENDASENSNEDQPDNKNTDGTEQENTANSTEGSEVNQNEAVDENNASIV 263

Query: 1156 KDDSRAGKALKVESANSSQADSKTRQTVEEGFSSENAVKFDKPGINGSAET--------T 1311
            K +  +       SA  +  +S   Q V    ++  A   D P   G   T        +
Sbjct: 264  KSNEESASE-DGSSATLTTKESNEEQQVYTDSTTVIAETVDNPNPQGDESTLKTVVMAQS 322

Query: 1312 EKGNLVLEDSNSVLSKHPIEEN 1377
            E+ N      N   +++P   N
Sbjct: 323  EESNTASNGENPTTTENPEAAN 344


>ref|XP_002274729.1| PREDICTED: uncharacterized protein LOC100259947 isoform 1 [Vitis
            vinifera] gi|359475528|ref|XP_003631696.1| PREDICTED:
            uncharacterized protein LOC100259947 isoform 2 [Vitis
            vinifera]
          Length = 511

 Score = 94.7 bits (234), Expect = 5e-17
 Identities = 103/403 (25%), Positives = 162/403 (40%), Gaps = 50/403 (12%)
 Frame = +1

Query: 310  QSVGRNQNPKGFKVKHAFQVSLVLVICIWLLYQIQNSHYKENNF-----SVPLENKLKNG 474
            +S  RNQ  KGFKVKH  Q+ L+L +C WL+YQ+++SH K+  F      +    +  N 
Sbjct: 3    KSPSRNQRSKGFKVKHILQICLLLAVCFWLIYQVKHSHDKKKEFDANDAKISSNTQGGNE 62

Query: 475  KVDFGRKVTAGSNVGVEIDFHDGNSIIQHRNVDDG-ENGDDHLDQNATEKPQEEPLQQED 651
             + FGRK       G   +   G    +  +   G E  +   D+   E+  +   +QE+
Sbjct: 63   LLKFGRKDLHPRVDGEAKNEKHGEEETEEEDEAGGVEEEESKHDEEQEEEESKHDEEQEE 122

Query: 652  SDGIISHNE-----GNEDEEVENQQKGKLG---------NEEDKSTLPSDGDDAAELDKE 789
             +  +   E     G +DE  EN Q+   G         +EE +     D  ++ E + E
Sbjct: 123  EESKVDEREDEGRGGGDDEIDENDQERAEGESDHDEEVLDEEKEREEEGDEKESGEKESE 182

Query: 790  GKDYKRVTEENGPELEHEG-----IDAKDNPIKQHXXXXXXXXXXXXTIGDGDEVR---S 945
             KD     E+   + +H+G      +A++   K                G+ D++     
Sbjct: 183  EKDDLSENEKEMDDQDHDGGSRNAHEAREEHYKADDASSAVAHDTQTNGGEADKMEDFDE 242

Query: 946  SVKDRDTK------------ESAEEKTLSPAEAESNIPADQSETISGINGFHDENGI--- 1080
            +  +++TK              AEE  L+  EA SN+  D  E  + IN    EN     
Sbjct: 243  NTLEQETKPNNNELSSEHKNSKAEEVELAENEASSNV-TDSQEKGTEINSPKSENSSLQN 301

Query: 1081 PP------DGLDLENNNVSETSSDDDSATIMKDDSRAGKALKVESANSSQADSKTR-QTV 1239
            PP      D  ++ N N SE S+ D S     D S         S  SS +D+K   +TV
Sbjct: 302  PPITTESNDQPEISNKNSSEVSNKDSSEVSNNDSSEL-------STKSSDSDTKNGIETV 354

Query: 1240 EEGFSSENAVKFDKPGINGSAETTEKGNLVLEDSNSVLSKHPI 1368
             +   ++NA         G    TE+G     D+  V+ K  I
Sbjct: 355  LDPIQAQNA--------TGEGINTEQG----ADTQHVVLKQTI 385


>ref|XP_004160947.1| PREDICTED: uncharacterized protein LOC101230130 [Cucumis sativus]
          Length = 728

 Score = 94.0 bits (232), Expect = 9e-17
 Identities = 96/382 (25%), Positives = 158/382 (41%), Gaps = 24/382 (6%)
 Frame = +1

Query: 301  MVHQSVGRNQNPKGFKVKHAFQVSLVLVICIWLLYQIQNSHYKENNF--SVPLENKLKNG 474
            M   S  R+Q  KGFKVKHA Q+ ++L +C+WL+YQ+Q+S  K+  F  S  L+  +K G
Sbjct: 1    MFRSSPRRSQRSKGFKVKHALQIFILLGVCVWLVYQVQHSRGKKATFNESTKLDEVVKLG 60

Query: 475  KVDFGRKVTAG-------------SNVGVEIDFHDGNSIIQHRNVDDGENGDDHLDQNAT 615
            + D   +V                +  G   +FHD     Q    +D EN D  +D    
Sbjct: 61   RKDLHPRVDENITRDESHREDEEETRRGGNDEFHD-----QQEVQEDTENKDFVVD---I 112

Query: 616  EKPQEEPLQQEDSDGIISHNEGNEDEEVENQQKGKLGNEEDKSTLPSDGDDAAELDKE-G 792
            EK      ++E++  +    E  E++E+EN+ K    NEE K           E DKE G
Sbjct: 113  EK------EREENSEVRKETETEENKEIENENK---ENEEIK-----------ENDKENG 152

Query: 793  KDYKRVTEENGPELEHEGIDAKDN-PIKQHXXXXXXXXXXXXTIGDGDEVRSSVKDRDTK 969
            +  K  ++ENG E    GI+   N   K+H               +G+E     +++D  
Sbjct: 153  EIQKSQSDENGEEGRGGGIEENVNEESKEHGNQEV----------NGNEESKGQENQDVN 202

Query: 970  ESAEEKTLSPAEAESNIPADQSETISGINGFHDENGIP-------PDGLDLENNNVSETS 1128
             + E K         N  + + E    +NG  +  G+         +   LEN  V+   
Sbjct: 203  GNEESKVQENQGLSGNEESKEQEN-QEVNGSEESKGLENQEVNGNEESKGLENQEVNGNE 261

Query: 1129 SDDDSATIMKDDSRAGKALKVESANSSQADSKTRQTVEEGFSSENAVKFDKPGINGSAET 1308
                      + +   K L+ +  N ++         +EG  +E +   +    NG+ E+
Sbjct: 262  ERKGLENQEVNGNEESKELENQEVNGNEGSKGLEN--QEGNGNEESKGLENQEGNGNEES 319

Query: 1309 TEKGNLVLEDSNSVLSKHPIEE 1374
             EKGN    +    +++ P E+
Sbjct: 320  KEKGNQEENEGKDKVNEMPTED 341


>ref|NP_195495.1| uncharacterized protein [Arabidopsis thaliana]
            gi|4490727|emb|CAB38930.1| putative protein [Arabidopsis
            thaliana] gi|7270765|emb|CAB80447.1| putative protein
            [Arabidopsis thaliana] gi|26450588|dbj|BAC42406.1|
            unknown protein [Arabidopsis thaliana]
            gi|332661441|gb|AEE86841.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 532

 Score = 91.7 bits (226), Expect = 4e-16
 Identities = 90/355 (25%), Positives = 160/355 (45%), Gaps = 22/355 (6%)
 Frame = +1

Query: 322  RNQNPKGFKVKHAFQVSLVLVICIWLLYQIQNSHYKENNF---SVPLENKLKNGKVDFGR 492
            R Q  KG KVKH  Q++L+L + IWL+YQ+++SH K+  F   S  + + + N  V+ GR
Sbjct: 7    RGQRSKGIKVKHCIQLTLLLGVGIWLIYQMKHSHEKKAEFEGTSKIVVDDIDNTVVNLGR 66

Query: 493  K-----VTAGSNVGVEIDFHDGNSIIQHRNVD-DGENGDDHLDQNATEKPQEEPLQQE-- 648
            K     +    +V  E++  +G+      +V  D ENGD+ +++   EK  EE  ++E  
Sbjct: 67   KDLRPRIEETKDVKDEVEDEEGSKNEGGGDVSTDKENGDEIVEREEEEKAVEENNEKEAE 126

Query: 649  ---DSDGIISHNEGNEDEEVENQQKGKLGNEEDKSTLPSDGDDAAELDKEGKDYKRVTEE 819
               + +G    N G  ++ V+  + G   + E+   +   GDDA+     G +     E+
Sbjct: 127  GTGNEEGNEDSNNGESEKVVDESEGGNEISNEEAREINYKGDDASSEVMHGTE-----EK 181

Query: 820  NGPELEHEGIDAKDNPIKQHXXXXXXXXXXXXTIGDGDEVRSSVKDRDTKESAEEKTLSP 999
            +  ++E EG ++K N  +                G  +EV      ++   +  E     
Sbjct: 182  SNEKVEVEG-ESKSNSTEN-------VSVHEDESGPKNEVLEGSVIKEVSLNTTENGSDD 233

Query: 1000 AEAESNIPADQSETISGINGFHDENG-IPPDGLDLEN-NNVSETSSDDDSATIMKD---D 1164
             E +       S+T  G  GF D NG +P   L   N    +E+S  D+S +  K     
Sbjct: 234  GEQQETKSELDSKT--GEKGFSDSNGELPETNLSTSNATETTESSGSDESGSSGKSTGYQ 291

Query: 1165 SRAGKALKVESANSSQADSKTRQT---VEEGFSSENAVKFDKPGINGSAETTEKG 1320
                +  + E   SS+ +SK +++    ++  SS++  K +KP      E++ +G
Sbjct: 292  QTKNEEDEKEKVQSSEEESKVKESGKNEKDASSSQDESKEEKPERKKKEESSSQG 346


Top