BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015389
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633856.1| PREDICTED: structural maintenance of chromos...   126   2e-27
emb|CBI22212.3| unnamed protein product [Vitis vinifera]              126   2e-27
ref|XP_002323859.1| condensin complex components subunit [Populu...   124   1e-26
ref|XP_003568186.1| PREDICTED: structural maintenance of chromos...   122   3e-26
gb|AAT07581.1| putative SMC protein [Oryza sativa Japonica Group...   122   3e-26

>ref|XP_003633856.1| PREDICTED: structural maintenance of chromosomes protein 4-like
           [Vitis vinifera]
          Length = 1486

 Score =  126 bits (316), Expect = 2e-27
 Identities = 64/76 (84%), Positives = 72/76 (94%)
 Frame = -1

Query: 230 RKVEQECIRERESLIPLEQAARQKVTELVSVMESEKSQGSVLKAILHAKESNEIEGIYGR 51
           RKVEQEC +E+E+ + LEQAARQKVTEL+S+MESEKSQGSVLKAIL AKESN+IEGIYGR
Sbjct: 744 RKVEQECNKEQEATVLLEQAARQKVTELMSLMESEKSQGSVLKAILQAKESNQIEGIYGR 803

Query: 50  LGDLGAIDAKYDVAIS 3
           +GDLGAIDAKYDVAIS
Sbjct: 804 MGDLGAIDAKYDVAIS 819


>emb|CBI22212.3| unnamed protein product [Vitis vinifera]
          Length = 1253

 Score =  126 bits (316), Expect = 2e-27
 Identities = 64/76 (84%), Positives = 72/76 (94%)
 Frame = -1

Query: 230 RKVEQECIRERESLIPLEQAARQKVTELVSVMESEKSQGSVLKAILHAKESNEIEGIYGR 51
           RKVEQEC +E+E+ + LEQAARQKVTEL+S+MESEKSQGSVLKAIL AKESN+IEGIYGR
Sbjct: 505 RKVEQECNKEQEATVLLEQAARQKVTELMSLMESEKSQGSVLKAILQAKESNQIEGIYGR 564

Query: 50  LGDLGAIDAKYDVAIS 3
           +GDLGAIDAKYDVAIS
Sbjct: 565 MGDLGAIDAKYDVAIS 580


>ref|XP_002323859.1| condensin complex components subunit [Populus trichocarpa]
           gi|222866861|gb|EEF03992.1| condensin complex components
           subunit [Populus trichocarpa]
          Length = 1256

 Score =  124 bits (310), Expect = 1e-26
 Identities = 63/76 (82%), Positives = 70/76 (92%)
 Frame = -1

Query: 230 RKVEQECIRERESLIPLEQAARQKVTELVSVMESEKSQGSVLKAILHAKESNEIEGIYGR 51
           RKVEQE I+E+E LIPLEQAARQKV EL S+++ EKSQGSVLKAILHAKESNEI GI+GR
Sbjct: 508 RKVEQESIKEQEELIPLEQAARQKVAELKSIIDLEKSQGSVLKAILHAKESNEIRGIHGR 567

Query: 50  LGDLGAIDAKYDVAIS 3
           +GDLGAIDAKYDVAIS
Sbjct: 568 MGDLGAIDAKYDVAIS 583


>ref|XP_003568186.1| PREDICTED: structural maintenance of chromosomes protein 4-like
           [Brachypodium distachyon]
          Length = 1243

 Score =  122 bits (306), Expect = 3e-26
 Identities = 61/76 (80%), Positives = 69/76 (90%)
 Frame = -1

Query: 230 RKVEQECIRERESLIPLEQAARQKVTELVSVMESEKSQGSVLKAILHAKESNEIEGIYGR 51
           RKVEQEC+++ ESLIPLEQAARQKV E+ S  +SEK+QG+VLKAIL AKES EI+GIYGR
Sbjct: 502 RKVEQECLKQEESLIPLEQAARQKVAEIKSTRDSEKNQGTVLKAILQAKESKEIDGIYGR 561

Query: 50  LGDLGAIDAKYDVAIS 3
           LGDLGAIDAKYDVAIS
Sbjct: 562 LGDLGAIDAKYDVAIS 577


>gb|AAT07581.1| putative SMC protein [Oryza sativa Japonica Group]
           gi|218197032|gb|EEC79459.1| hypothetical protein
           OsI_20467 [Oryza sativa Indica Group]
           gi|222632094|gb|EEE64226.1| hypothetical protein
           OsJ_19059 [Oryza sativa Japonica Group]
          Length = 1241

 Score =  122 bits (306), Expect = 3e-26
 Identities = 61/76 (80%), Positives = 69/76 (90%)
 Frame = -1

Query: 230 RKVEQECIRERESLIPLEQAARQKVTELVSVMESEKSQGSVLKAILHAKESNEIEGIYGR 51
           RKVEQEC+++ ESLIPLEQAARQKV E+ +  +SEK+QG+VLKAIL AKES EIEGIYGR
Sbjct: 500 RKVEQECLKQEESLIPLEQAARQKVAEIKTTRDSEKNQGTVLKAILQAKESKEIEGIYGR 559

Query: 50  LGDLGAIDAKYDVAIS 3
           LGDLGAIDAKYDVAIS
Sbjct: 560 LGDLGAIDAKYDVAIS 575