BLASTX nr result

ID: Coptis24_contig00015385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015385
         (1265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330418.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-12
ref|XP_002525789.1| conserved hypothetical protein [Ricinus comm...    69   3e-09
ref|XP_002319389.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-08
ref|XP_002326105.1| predicted protein [Populus trichocarpa] gi|2...    60   9e-07
ref|XP_003534675.1| PREDICTED: uncharacterized protein At5g23160...    60   1e-06

>ref|XP_002330418.1| predicted protein [Populus trichocarpa] gi|222871803|gb|EEF08934.1|
            predicted protein [Populus trichocarpa]
          Length = 291

 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 80/301 (26%), Positives = 131/301 (43%), Gaps = 22/301 (7%)
 Frame = +2

Query: 176  TPFKMTNN---KNRVRRTKSSWL-CFGPVSCTGSDKETDHDLGPVY------MKVVKEDN 325
            T  K TN+   +NR  + K+ +L CF PV   G +++   + G  Y      +K VK + 
Sbjct: 4    TKTKKTNSSTDQNRKNKNKNKFLLCFRPVVMDGLERQGLEEGGGHYGGGDPVLKCVKLEI 63

Query: 326  ----------PKKMKSTSEKMIVGRSQKRSPRRIFSRIAKAVFFEASMKKSRKVQQDPYH 475
                      P  + S+S++      +KR  ++  SR+ KA+ FE S+ K  K ++    
Sbjct: 64   KDGEVFPQIFPTNLPSSSKES-TAYPEKRGHKKNISRLLKAILFETSLAKKNKKRK---- 118

Query: 476  ILRNLSTKNEKISDVKSSRKLLKNPKIEEGNSKNXXXXXXXXXXXXXXXXXXXXXXXXXX 655
            +L+ L  ++EK+    +  K   + K +E   K+                          
Sbjct: 119  LLQKLK-QSEKVEKESNPEKNSVDSKNKELAKKDDGINISNSNMTGSSHSSLWSSSSSSL 177

Query: 656  XXXXXXEQKNSKSFRSIS--FEPKQNALEDLKPKTIKKIYSSTANGXXXXXXXXXXXIFW 829
                      S+SFRS S  F+PKQ+ ++        K ++ST  G           + W
Sbjct: 178  SLNSRSLSDTSRSFRSNSSEFKPKQDNMQGNG-----KGHTSTI-GLCLVLVSLMVLVLW 231

Query: 830  GRVCAIICTSTWIYFSPLRRKTXXXXXXXXXXXXXXXRMESREYKKRVVMEGFLERSHSR 1009
            G+VCAI+CTSTW++  P  R +                ++S+EYKK ++MEG LERS + 
Sbjct: 232  GKVCAILCTSTWLFLVP--RCSKARINNLSQKILDYEGIDSKEYKKMIIMEGLLERSRNH 289

Query: 1010 V 1012
            V
Sbjct: 290  V 290


>ref|XP_002525789.1| conserved hypothetical protein [Ricinus communis]
            gi|223534939|gb|EEF36625.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 280

 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 63/231 (27%), Positives = 93/231 (40%), Gaps = 3/231 (1%)
 Frame = +2

Query: 326  PKKMKSTSEKMIVGRSQKRSPRRIFSRIAKAVFFEASMKKSRKVQQDPYHILRNLSTKNE 505
            P    S      + R  K+S ++ F R  KAVFFE S+ K  K+++      +  ST  E
Sbjct: 61   PSVYPSPEGDAAIARQNKKSKKK-FLRAVKAVFFETSLAK--KIKKRTSTKKKKYST-GE 116

Query: 506  KISDVKSSRKLLKNPKIEEGNSKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQKN 685
             IS+V     L+K   + +  SK                                    N
Sbjct: 117  TISNVDKDLDLVKEKLLHQKLSKKFTGRNIVSYYAPSVNSSSVCSSAPSL--------NN 168

Query: 686  SKSF--RSISFEPKQNALED-LKPKTIKKIYSSTANGXXXXXXXXXXXIFWGRVCAIICT 856
            SK F  R IS  P    LE+ +K +   K +  +  G           + WG+V AI+CT
Sbjct: 169  SKRFLERVISLGPSNPILENNIKKQENGKGHYGSNTGLFLLLVTLTVLVLWGKVYAILCT 228

Query: 857  STWIYFSPLRRKTXXXXXXXXXXXXXXXRMESREYKKRVVMEGFLERSHSR 1009
            STW++F P                     M+  EYKK+++MEGFL+R+ +R
Sbjct: 229  STWLFFVP-NWSNVSGKKLLKNGRVHSQSMDLEEYKKKIIMEGFLDRNRNR 278


>ref|XP_002319389.1| predicted protein [Populus trichocarpa] gi|222857765|gb|EEE95312.1|
            predicted protein [Populus trichocarpa]
          Length = 278

 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 62/254 (24%), Positives = 98/254 (38%), Gaps = 6/254 (2%)
 Frame = +2

Query: 269  KETDHDLGPV-YMKVVKEDNP--KKMKSTSEKMIVGRSQKRSPRRIFSRIAKAVFFEASM 439
            KE DH    V    ++ EDN     + S+SE  ++  S K++     SR+ KAVFFE  +
Sbjct: 30   KERDHMKRLVPNSSLLSEDNDTCSAIISSSENSLILHSSKKN----LSRVIKAVFFETIL 85

Query: 440  KKSRKVQQDPYHILRNLSTKNEKISDVKSSRKLLKNPKIEEGNSKNXXXXXXXXXXXXXX 619
              S+++     ++ ++ +  ++  S   SS      P     +SK               
Sbjct: 86   --SKRIHDRKGNLCQDSNIGSKPSSSSSSSSSSSPPPPPPSMDSKKSLDDTSDHDNTNLV 143

Query: 620  XXXXXXXXXXXXXXXXXXEQKNSKSFRSISFEPKQNALEDLKPKTIKKIYSSTANGXXXX 799
                                  S+    I      N   + K KT+ K      +G    
Sbjct: 144  NKVLIDTHQANEVTSCPSSISESRKLSKIKNSRNPNQELEFKAKTMDK------SGIYLF 197

Query: 800  XXXXXXXIFWGRVCAIICTSTWIYFSPLRRKTXXXXXXXXXXXXXXXRMESRE---YKKR 970
                   + WG++CAI  T  W+YF P R+                 + ES++   YKK+
Sbjct: 198  LISLTVTVLWGKLCAIFFTIIWLYFLPRRQHNTSRPQNVTRSLWLPEKEESKDQYSYKKK 257

Query: 971  VVMEGFLERSHSRV 1012
            V+MEG LER+H RV
Sbjct: 258  VIMEGLLERNHQRV 271


>ref|XP_002326105.1| predicted protein [Populus trichocarpa] gi|222862980|gb|EEF00487.1|
            predicted protein [Populus trichocarpa]
          Length = 278

 Score = 60.5 bits (145), Expect = 9e-07
 Identities = 56/224 (25%), Positives = 85/224 (37%), Gaps = 6/224 (2%)
 Frame = +2

Query: 386  PRRIFSRIAKAVFFEASMKK---SRKVQQDPYHILRNLSTKNEKISDVKSSRKLLKNPKI 556
            P++ FSR+ KAVFFE  + K    RK  Q   H   +  +K+   S   +S++ L +   
Sbjct: 84   PKKNFSRVIKAVFFETILSKRVRDRKGSQCQDH---SNGSKHISSSSPMNSKRTLDDTSD 140

Query: 557  EEGNSKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQKNSKSFRSISFEPKQNALE 736
               N+ +                                E +     +  S  P Q    
Sbjct: 141  HHDNTDHQVSEANLVKSCSSSLS----------------ETRKMSKIKKNSTNPNQEL-- 182

Query: 737  DLKPKTIKKIYSSTANGXXXXXXXXXXXIFWGRVCAIICTSTWIYFSPLRRKTXXXXXXX 916
            + K + + K      +            I WG++CAI C   W+YF P RR         
Sbjct: 183  EFKARNMDK------SDIYLLLMSFTVTILWGKLCAIFCNLIWLYFLPRRRHNTSRPENV 236

Query: 917  XXXXXXXXRMESRE---YKKRVVMEGFLERSHSRV*INDDLWIT 1039
                    + ES++   YKK+V+M G LER H RV  ND  ++T
Sbjct: 237  RTSLWLPEKKESKDQYYYKKKVIMAGLLERKHQRV--NDIKFLT 278


>ref|XP_003534675.1| PREDICTED: uncharacterized protein At5g23160-like [Glycine max]
          Length = 253

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
 Frame = +2

Query: 821  IFWGRVCAIICTSTWIYFSPLRRKTXXXXXXXXXXXXXXXR---MESREYKKRVVMEGFL 991
            +FWGR+CAI+CTS W+Y +P  RK+               +   ++S EYKK+V+MEG L
Sbjct: 186  LFWGRLCAILCTSAWLYCTPRFRKSGGYVNDDEDLQTTKSKEVDLDSEEYKKKVIMEGLL 245

Query: 992  ERSH 1003
             R+H
Sbjct: 246  GRNH 249


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