BLASTX nr result

ID: Coptis24_contig00015381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015381
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262814.1| PREDICTED: uncharacterized protein LOC100263...   109   3e-22
emb|CBI35099.3| unnamed protein product [Vitis vinifera]              104   9e-21
ref|XP_003633521.1| PREDICTED: uncharacterized protein LOC100853...   104   9e-21
ref|XP_004146778.1| PREDICTED: 3'-5' exoribonuclease 1-like [Cuc...   103   1e-20
ref|XP_003542802.1| PREDICTED: uncharacterized protein LOC100811...   100   2e-19

>ref|XP_002262814.1| PREDICTED: uncharacterized protein LOC100263388 [Vitis vinifera]
          Length = 425

 Score =  109 bits (272), Expect = 3e-22
 Identities = 47/81 (58%), Positives = 59/81 (72%)
 Frame = +1

Query: 46  DRQFVPSPSPHKPKSLTFPFIQFYPAHMDPSKERRMYCQCGVKSSKCMVRKPGPNHGSFF 225
           D Q+ P   PHK K    PF++F+P  ++P K+   YC CGV+SS+ M+RKPGP HGSFF
Sbjct: 345 DCQYGPIQHPHKLKHPLGPFMRFHPIPVEPEKDLGTYCFCGVRSSRQMLRKPGPMHGSFF 404

Query: 226 FGCSNWSAARGAACHYFEWAS 288
           FGC NW+AARGA C YFEWA+
Sbjct: 405 FGCGNWTAARGALCSYFEWAT 425


>emb|CBI35099.3| unnamed protein product [Vitis vinifera]
          Length = 520

 Score =  104 bits (259), Expect = 9e-21
 Identities = 48/88 (54%), Positives = 54/88 (61%)
 Frame = +1

Query: 28  AWHQSLDRQFVPSPSPHKPKSLTFPFIQFYPAHMDPSKERRMYCQCGVKSSKCMVRKPGP 207
           +W QS +    P   P K +  T P   ++P           YC CGVKSSK MVRKPGP
Sbjct: 444 SWKQSPELSSFPEYHPQKLREPTIPLFHYHP-----------YCYCGVKSSKGMVRKPGP 492

Query: 208 NHGSFFFGCSNWSAARGAACHYFEWASP 291
             GSFFFGC NW+AARGA CHYFEWASP
Sbjct: 493 KQGSFFFGCGNWTAARGARCHYFEWASP 520


>ref|XP_003633521.1| PREDICTED: uncharacterized protein LOC100853630 [Vitis vinifera]
          Length = 415

 Score =  104 bits (259), Expect = 9e-21
 Identities = 48/88 (54%), Positives = 54/88 (61%)
 Frame = +1

Query: 28  AWHQSLDRQFVPSPSPHKPKSLTFPFIQFYPAHMDPSKERRMYCQCGVKSSKCMVRKPGP 207
           +W QS +    P   P K +  T P   ++P           YC CGVKSSK MVRKPGP
Sbjct: 339 SWKQSPELSSFPEYHPQKLREPTIPLFHYHP-----------YCYCGVKSSKGMVRKPGP 387

Query: 208 NHGSFFFGCSNWSAARGAACHYFEWASP 291
             GSFFFGC NW+AARGA CHYFEWASP
Sbjct: 388 KQGSFFFGCGNWTAARGARCHYFEWASP 415


>ref|XP_004146778.1| PREDICTED: 3'-5' exoribonuclease 1-like [Cucumis sativus]
           gi|449511572|ref|XP_004163993.1| PREDICTED: 3'-5'
           exoribonuclease 1-like [Cucumis sativus]
          Length = 414

 Score =  103 bits (257), Expect = 1e-20
 Identities = 45/87 (51%), Positives = 55/87 (63%)
 Frame = +1

Query: 31  WHQSLDRQFVPSPSPHKPKSLTFPFIQFYPAHMDPSKERRMYCQCGVKSSKCMVRKPGPN 210
           W QS +    P   P KPK +  P +Q++P           YC CGV+SS+ MVRKPGP 
Sbjct: 339 WKQSPETVTFPPQPPMKPKPMHIPIVQYFP-----------YCFCGVRSSRGMVRKPGPK 387

Query: 211 HGSFFFGCSNWSAARGAACHYFEWASP 291
            GSFFFGC NW+A +GA CHYFEWA+P
Sbjct: 388 QGSFFFGCGNWTATKGARCHYFEWATP 414


>ref|XP_003542802.1| PREDICTED: uncharacterized protein LOC100811151 [Glycine max]
          Length = 414

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 45/86 (52%), Positives = 55/86 (63%)
 Frame = +1

Query: 31  WHQSLDRQFVPSPSPHKPKSLTFPFIQFYPAHMDPSKERRMYCQCGVKSSKCMVRKPGPN 210
           W QS ++  V    P+K K +T P +Q++P           +C CGVKSS+ MVRKPGP 
Sbjct: 339 WKQSPEQPIVFPHCPYKAKDITTPVVQYHP-----------FCFCGVKSSRGMVRKPGPK 387

Query: 211 HGSFFFGCSNWSAARGAACHYFEWAS 288
            GS FFGC NW+A RGA CHYFEWAS
Sbjct: 388 QGSLFFGCGNWTATRGARCHYFEWAS 413


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