BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015370
         (1120 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280180.1| PREDICTED: transcription factor RF2b [Vitis ...   310   4e-82
ref|XP_003544931.1| PREDICTED: transcription factor RF2b [Glycin...   304   3e-80
ref|XP_003552912.1| PREDICTED: transcription factor RF2b-like [G...   303   7e-80
emb|CAN65087.1| hypothetical protein VITISV_035032 [Vitis vinifera]   302   1e-79
ref|XP_002266792.1| PREDICTED: transcription factor RF2b-like [V...   301   1e-79

>ref|XP_002280180.1| PREDICTED: transcription factor RF2b [Vitis vinifera]
          Length = 359

 Score =  310 bits (794), Expect = 4e-82
 Identities = 166/214 (77%), Positives = 181/214 (84%), Gaps = 3/214 (1%)
 Frame = +1

Query: 58  DVMDAKKAMAPDKLAELWALDPKRAKRILANRQSAARSKERKARYILELERKVQTLQTEA 237
           D ++AKKAMAPDKLAELW LDPKRAKRILANRQSAARSKERKARYILELERKVQTLQTEA
Sbjct: 136 DTIEAKKAMAPDKLAELWTLDPKRAKRILANRQSAARSKERKARYILELERKVQTLQTEA 195

Query: 238 TTLSAQLTLFQRDTTGLTSENTELKLRLQAMEQQAQLRDALNEALKQEVERLKVATGEAG 417
           TTLSAQLTLFQRDTTGLT+ENTELKLRLQAMEQQAQLRDALNEALK+EVERLK+ATGE  
Sbjct: 196 TTLSAQLTLFQRDTTGLTTENTELKLRLQAMEQQAQLRDALNEALKKEVERLKIATGEIM 255

Query: 418 GHSEAFNMGMHYMPYNSSSIFSLPQQPGPGGHQNMQFPQFHPSQSNMMNHSQ--LG-ANS 588
             S+A+N+GMH++PY  SS FS   QPGP   QN+Q PQFHP  SNM+ H Q  LG A+S
Sbjct: 256 TSSDAYNLGMHHVPYTQSSFFSHQSQPGPSESQNIQMPQFHPFPSNMLTHHQPLLGAAHS 315

Query: 589 RVFSEMLQQDQLGRFQGLDISTNRESHSVKSEGP 690
              S+MLQQD LGR QGLDIS +R    VKSEGP
Sbjct: 316 NALSDMLQQDPLGRLQGLDIS-SRGPSLVKSEGP 348


>ref|XP_003544931.1| PREDICTED: transcription factor RF2b [Glycine max]
          Length = 362

 Score =  304 bits (778), Expect = 3e-80
 Identities = 157/212 (74%), Positives = 179/212 (84%)
 Frame = +1

Query: 55  GDVMDAKKAMAPDKLAELWALDPKRAKRILANRQSAARSKERKARYILELERKVQTLQTE 234
           G++MDAKKAM PDKLAELW +DPKRAKRILANRQSAARSKERKARYI ELERKVQTLQTE
Sbjct: 141 GEIMDAKKAMPPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTE 200

Query: 235 ATTLSAQLTLFQRDTTGLTSENTELKLRLQAMEQQAQLRDALNEALKQEVERLKVATGEA 414
           ATTLSAQLTL+QRDTTGL++ENTELKLRLQAMEQQAQLRDALNEALK+EVERLKVATGE 
Sbjct: 201 ATTLSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAQLRDALNEALKKEVERLKVATGEM 260

Query: 415 GGHSEAFNMGMHYMPYNSSSIFSLPQQPGPGGHQNMQFPQFHPSQSNMMNHSQLGANSRV 594
             H+++FN+GMH MP++ S+   +P Q GP GHQNMQ P F  + S M +H     +S  
Sbjct: 261 MSHTDSFNLGMHLMPFSGSNFVPIPPQSGPSGHQNMQMPPFGLTPSTMPSHLLHQTSSHP 320

Query: 595 FSEMLQQDQLGRFQGLDISTNRESHSVKSEGP 690
           +SE+LQ DQLGRFQGLDIS ++ S  VKSEGP
Sbjct: 321 YSEILQNDQLGRFQGLDIS-SKGSTLVKSEGP 351


>ref|XP_003552912.1| PREDICTED: transcription factor RF2b-like [Glycine max]
          Length = 380

 Score =  303 bits (775), Expect = 7e-80
 Identities = 162/230 (70%), Positives = 181/230 (78%)
 Frame = +1

Query: 1   VDGSSSQSXXXXXXXXXXGDVMDAKKAMAPDKLAELWALDPKRAKRILANRQSAARSKER 180
           VDGS+S S          G++MDAKKAM PDKLAELW +DPKRAKRILANRQSAARSKER
Sbjct: 149 VDGSTSTSMF--------GEIMDAKKAMPPDKLAELWNIDPKRAKRILANRQSAARSKER 200

Query: 181 KARYILELERKVQTLQTEATTLSAQLTLFQRDTTGLTSENTELKLRLQAMEQQAQLRDAL 360
           KARYI ELERKVQTLQTEATTLSAQLTL+QRDTTGL+SENTELKLRLQAMEQQAQLRD L
Sbjct: 201 KARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSSENTELKLRLQAMEQQAQLRDVL 260

Query: 361 NEALKQEVERLKVATGEAGGHSEAFNMGMHYMPYNSSSIFSLPQQPGPGGHQNMQFPQFH 540
           N+AL +EVERLK+ATGEA   SE+FN+GMH MPY  S+ FS+P   GP GHQNMQ P F 
Sbjct: 261 NDALMKEVERLKIATGEALNQSESFNLGMHQMPYAGSNFFSIPPHSGPSGHQNMQLPPFG 320

Query: 541 PSQSNMMNHSQLGANSRVFSEMLQQDQLGRFQGLDISTNRESHSVKSEGP 690
            S S +  H     NS   S++LQ DQLGR QGLDIS ++ +  VKSEGP
Sbjct: 321 HSHSTVPTHQLQQTNSHQMSDILQNDQLGRLQGLDIS-SKGTPVVKSEGP 369


>emb|CAN65087.1| hypothetical protein VITISV_035032 [Vitis vinifera]
          Length = 342

 Score =  302 bits (773), Expect = 1e-79
 Identities = 166/230 (72%), Positives = 180/230 (78%)
 Frame = +1

Query: 1   VDGSSSQSXXXXXXXXXXGDVMDAKKAMAPDKLAELWALDPKRAKRILANRQSAARSKER 180
           VD SSS+           G++MDAKKAM PDKLAELW +DPKRAKRILANRQSAARSKER
Sbjct: 108 VDXSSSKGEEGVF-----GEIMDAKKAMPPDKLAELWNIDPKRAKRILANRQSAARSKER 162

Query: 181 KARYILELERKVQTLQTEATTLSAQLTLFQRDTTGLTSENTELKLRLQAMEQQAQLRDAL 360
           KARYILELERKVQTLQTEATTLSAQLTL+QRDTTGL++ENTELKLRLQAMEQQAQLRDAL
Sbjct: 163 KARYILELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAQLRDAL 222

Query: 361 NEALKQEVERLKVATGEAGGHSEAFNMGMHYMPYNSSSIFSLPQQPGPGGHQNMQFPQFH 540
           N ALKQEVERLK+ATGE    SE+F++GM  M Y  SS  SLPQQ GP G  NMQ P FH
Sbjct: 223 NTALKQEVERLKIATGEIMSPSESFDLGMQXMLYTPSSFLSLPQQIGPAGQPNMQLPPFH 282

Query: 541 PSQSNMMNHSQLGANSRVFSEMLQQDQLGRFQGLDISTNRESHSVKSEGP 690
            S SNM        NS+  SE+LQ D LGR QGLDIS +R SH VKSEGP
Sbjct: 283 HSHSNMSTQYLQPINSQPISEILQNDPLGRLQGLDIS-SRGSHLVKSEGP 331


>ref|XP_002266792.1| PREDICTED: transcription factor RF2b-like [Vitis vinifera]
          Length = 344

 Score =  301 bits (772), Expect = 1e-79
 Identities = 161/212 (75%), Positives = 174/212 (82%)
 Frame = +1

Query: 55  GDVMDAKKAMAPDKLAELWALDPKRAKRILANRQSAARSKERKARYILELERKVQTLQTE 234
           G++MDAKKAM PDKLAELW +DPKRAKRILANRQSAARSKERKARYILELERKVQTLQTE
Sbjct: 123 GEIMDAKKAMPPDKLAELWNIDPKRAKRILANRQSAARSKERKARYILELERKVQTLQTE 182

Query: 235 ATTLSAQLTLFQRDTTGLTSENTELKLRLQAMEQQAQLRDALNEALKQEVERLKVATGEA 414
           ATTLSAQLTL+QRDTTGL++ENTELKLRLQAMEQQAQLRDALN ALKQEVERLK+ATGE 
Sbjct: 183 ATTLSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAQLRDALNTALKQEVERLKIATGEI 242

Query: 415 GGHSEAFNMGMHYMPYNSSSIFSLPQQPGPGGHQNMQFPQFHPSQSNMMNHSQLGANSRV 594
              SE+F++GM  M Y  SS  SLPQQ GP G  NMQ P FH S SNM        NS+ 
Sbjct: 243 MSPSESFDLGMQQMLYTPSSFLSLPQQIGPAGQPNMQLPPFHHSHSNMSTQYLQPINSQP 302

Query: 595 FSEMLQQDQLGRFQGLDISTNRESHSVKSEGP 690
            SE+LQ D LGR QGLDIS +R SH VKSEGP
Sbjct: 303 ISEILQNDPLGRLQGLDIS-SRGSHLVKSEGP 333