BLASTX nr result
ID: Coptis24_contig00015369
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00015369
(1626 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285580.1| PREDICTED: zinc finger CCCH domain-containin... 501 e-139
ref|XP_002515393.1| zinc finger protein, putative [Ricinus commu... 476 e-131
ref|XP_002324344.1| predicted protein [Populus trichocarpa] gi|2... 464 e-128
ref|XP_004138693.1| PREDICTED: zinc finger CCCH domain-containin... 458 e-126
ref|XP_004159245.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 457 e-126
>ref|XP_002285580.1| PREDICTED: zinc finger CCCH domain-containing protein 18 [Vitis
vinifera]
Length = 496
Score = 501 bits (1290), Expect = e-139
Identities = 264/476 (55%), Positives = 314/476 (65%), Gaps = 1/476 (0%)
Frame = +3
Query: 102 SLTAINEALVLDPTNXXXXXXXXXXXXAIRDAEEGLLHLKRARLLKEADSIFSAQTSKST 281
SL + EALV DPTN AI+DAEEGL HLKRARLL+EADS + K T
Sbjct: 23 SLAVLKEALVSDPTNSELLSVHEELIWAIKDAEEGLFHLKRARLLREADS--ALHDHKYT 80
Query: 282 VEDAXXXXXXXXXXXXXXXXXXGFSVGSKCRFRYTDGSWYNGQIIGLDGSRSARVTFLTP 461
ED + VGSKCRFRYTDG WYNG I+GL+G SA+++FL+P
Sbjct: 81 AEDVKVEPLDPSDAEAEPLEEQSYHVGSKCRFRYTDGRWYNGVILGLEGLDSAKISFLSP 140
Query: 462 TSENMLICKFFLQQRCRFSTNCRLSHGIDVPLSSLKNYIPTLWKQISVGSNIWAISDPNA 641
TSENMLICKFFLQQRCRF TNCRLSHG+DV LSSLK Y PT+W+Q VGS+IWA+SD
Sbjct: 141 TSENMLICKFFLQQRCRFGTNCRLSHGVDVHLSSLKQYNPTIWEQSLVGSSIWAVSDAKY 200
Query: 642 GIWRKAELESWDDTLGLAQVVFQDDGSSREVDGEGLSLSEYAQMXXXXXXXXXXXXXXXX 821
GIW++AELESWD+ L + +VVF+DDGSS ++ E +SLSEYA+M
Sbjct: 201 GIWKEAELESWDNELRVGKVVFRDDGSSEKLGTESISLSEYAEMSDGETDSSSEQSDSCD 260
Query: 822 XXXXXXPEGLGFMEAAALQRGIQTDTAVFAKWENHTRGIASKMMANMGYREGMGLGASGQ 1001
+GLGF+E+ ALQRGIQT+TA+FAKWENHTRGIASKMMANMGYREGMGLGASGQ
Sbjct: 261 DEEEEGSQGLGFLESTALQRGIQTETAIFAKWENHTRGIASKMMANMGYREGMGLGASGQ 320
Query: 1002 GMVDPITVKVLKPKQSLDHAFDSHKSDGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1181
G+VDP++VKVL PKQSLDHA +SH+++ N
Sbjct: 321 GIVDPLSVKVLPPKQSLDHALESHENEENKESRGKKRSRGGKRKRDKKFAAAARAKKDKE 380
Query: 1182 XFNPDVFSFINNQLATQIVHQN-GSLSKRQSKDFGESKNEDRKSLIAYDNEVRDLRVQVE 1358
PDVFS IN QLA N GS K+Q+K GE K EDR++L+AYD+EVR+LR++VE
Sbjct: 381 ESRPDVFSLINTQLAMHGEALNGGSAKKQQNKSLGEGKKEDRRALVAYDDEVRELRIRVE 440
Query: 1359 KLEEMVNRNRKEKVVYEAFSRKLSETRKXXXXXXXXXXXXXXXXXXKEKEKRWLKF 1526
KLEEMVNRN+KEKVVYEA RKL+ETRK +EKEKRWLKF
Sbjct: 441 KLEEMVNRNKKEKVVYEAAMRKLNETRKALAEAEAAHASASKAVVGREKEKRWLKF 496
>ref|XP_002515393.1| zinc finger protein, putative [Ricinus communis]
gi|223545337|gb|EEF46842.1| zinc finger protein, putative
[Ricinus communis]
Length = 495
Score = 476 bits (1224), Expect = e-131
Identities = 254/475 (53%), Positives = 304/475 (64%)
Frame = +3
Query: 102 SLTAINEALVLDPTNXXXXXXXXXXXXAIRDAEEGLLHLKRARLLKEADSIFSAQTSKST 281
SL A+N+AL DP+N AI+DAE+GLLHLKRARLL+E DS + SK T
Sbjct: 24 SLAALNDALASDPSNHELLSVQEELVQAIKDAEDGLLHLKRARLLREVDS--ALHDSKDT 81
Query: 282 VEDAXXXXXXXXXXXXXXXXXXGFSVGSKCRFRYTDGSWYNGQIIGLDGSRSARVTFLTP 461
D SVGSKCRFR+ DG WYNG+II L+GS +A++ FLTP
Sbjct: 82 GNDVKIEPLDSDEVGAEPLEEHSHSVGSKCRFRHNDGRWYNGKIIELEGSTNAKIAFLTP 141
Query: 462 TSENMLICKFFLQQRCRFSTNCRLSHGIDVPLSSLKNYIPTLWKQISVGSNIWAISDPNA 641
TSENML CKFFLQQRCRF TNCRLSHG+DVPLSSL+ YIPT+W Q VGS+IWA+SD NA
Sbjct: 142 TSENMLTCKFFLQQRCRFGTNCRLSHGVDVPLSSLRTYIPTMWDQSMVGSSIWAVSDSNA 201
Query: 642 GIWRKAELESWDDTLGLAQVVFQDDGSSREVDGEGLSLSEYAQMXXXXXXXXXXXXXXXX 821
GIWR+AELESWDD L + +VVF+DDGSS E++ + ++LSE+A
Sbjct: 202 GIWREAELESWDDKLRVGKVVFRDDGSSAELESDSMNLSEHALKSDEEESHSSSEQSDSS 261
Query: 822 XXXXXXPEGLGFMEAAALQRGIQTDTAVFAKWENHTRGIASKMMANMGYREGMGLGASGQ 1001
+GLGF+E++ LQRGIQT+TA+FA+WENHTRGIASKMMANMGYR+GMGLGASGQ
Sbjct: 262 DYEEESAQGLGFLESSTLQRGIQTETAIFARWENHTRGIASKMMANMGYRDGMGLGASGQ 321
Query: 1002 GMVDPITVKVLKPKQSLDHAFDSHKSDGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1181
GMVDPI+VKVL PKQSLDHA S K +
Sbjct: 322 GMVDPISVKVLPPKQSLDHALQSQKEEEIRENHGKKRSRGGKRKREKKLAALAKEAKEEE 381
Query: 1182 XFNPDVFSFINNQLATQIVHQNGSLSKRQSKDFGESKNEDRKSLIAYDNEVRDLRVQVEK 1361
NPDVFS IN QLA NG SK + SK DR+ LIAYD+E+++LR++ EK
Sbjct: 382 EMNPDVFSLINIQLAKHNEALNGG-SKTKQHHNKVSKKVDRRVLIAYDDEMKELRLRAEK 440
Query: 1362 LEEMVNRNRKEKVVYEAFSRKLSETRKXXXXXXXXXXXXXXXXXXKEKEKRWLKF 1526
LEEM +RN+KEKVVYEA RKL+ETRK KEKEK+WLKF
Sbjct: 441 LEEMASRNKKEKVVYEAAMRKLNETRKALAEAEAAHASASNAVVSKEKEKKWLKF 495
>ref|XP_002324344.1| predicted protein [Populus trichocarpa] gi|222865778|gb|EEF02909.1|
predicted protein [Populus trichocarpa]
Length = 495
Score = 464 bits (1193), Expect = e-128
Identities = 249/475 (52%), Positives = 298/475 (62%)
Frame = +3
Query: 102 SLTAINEALVLDPTNXXXXXXXXXXXXAIRDAEEGLLHLKRARLLKEADSIFSAQTSKST 281
SL A+N+AL DP+N I+D EEGLLHLKRARLL+EADS+ A S T
Sbjct: 24 SLAALNDALASDPSNPELLSVQEELLQVIKDVEEGLLHLKRARLLREADSVLHA--SYHT 81
Query: 282 VEDAXXXXXXXXXXXXXXXXXXGFSVGSKCRFRYTDGSWYNGQIIGLDGSRSARVTFLTP 461
VED +SVGSKCRFR+ DG WYNGQII L S +A++ FLTP
Sbjct: 82 VEDVKAEPLDPVHVEPEPLEDQCYSVGSKCRFRHVDGRWYNGQIIELVCSDTAKIAFLTP 141
Query: 462 TSENMLICKFFLQQRCRFSTNCRLSHGIDVPLSSLKNYIPTLWKQISVGSNIWAISDPNA 641
SENMLICKFFLQ+RCRF T+CRLSHG+DV LSSLKNY+PT+W Q VGS+IWA+SD N
Sbjct: 142 ISENMLICKFFLQERCRFGTSCRLSHGVDVSLSSLKNYVPTMWDQSLVGSSIWALSDSNV 201
Query: 642 GIWRKAELESWDDTLGLAQVVFQDDGSSREVDGEGLSLSEYAQMXXXXXXXXXXXXXXXX 821
GIWRKAELESWD+ + QVVF D GSS ++ E +++SEYA M
Sbjct: 202 GIWRKAELESWDNEHRVGQVVFHDGGSSAKLGSEAMTISEYALMSDEEETDSSSEGSDSS 261
Query: 822 XXXXXXPEGLGFMEAAALQRGIQTDTAVFAKWENHTRGIASKMMANMGYREGMGLGASGQ 1001
EGLGF+E+ LQRGIQT TA+FA WENHTRGIASKMMANMGYREGMGLGASGQ
Sbjct: 262 DYDEESAEGLGFLESTNLQRGIQTGTAIFATWENHTRGIASKMMANMGYREGMGLGASGQ 321
Query: 1002 GMVDPITVKVLKPKQSLDHAFDSHKSDGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1181
GM+DPI VKVL PKQSLDHA +S K +G
Sbjct: 322 GMLDPIPVKVLPPKQSLDHALESQK-EGIKDNHGKKRSRGGKRKREKKFAAAARAAKAEE 380
Query: 1182 XFNPDVFSFINNQLATQIVHQNGSLSKRQSKDFGESKNEDRKSLIAYDNEVRDLRVQVEK 1361
PDVF+ INNQLA N +K+Q E K +R+ L+AYD+E+++LR++VEK
Sbjct: 381 ETRPDVFTLINNQLAGHNEALNSESAKKQKSKGSEEKKVNRQDLLAYDDEIKELRIRVEK 440
Query: 1362 LEEMVNRNRKEKVVYEAFSRKLSETRKXXXXXXXXXXXXXXXXXXKEKEKRWLKF 1526
LE+M NRN+KEKVVYE+ RKL+ETR +EKEK+WLKF
Sbjct: 441 LEDMANRNKKEKVVYESAMRKLNETRIALAKAEASKASASNAITGREKEKKWLKF 495
>ref|XP_004138693.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Cucumis sativus]
Length = 497
Score = 458 bits (1178), Expect = e-126
Identities = 244/477 (51%), Positives = 306/477 (64%), Gaps = 2/477 (0%)
Frame = +3
Query: 102 SLTAINEALVLDPTNXXXXXXXXXXXXAIRDAEEGLLHLKRARLLKEADSIFSAQTSKST 281
SL A+ +AL DP+N AI+DAEEGLLHLKR+RLL+EAD++ S +
Sbjct: 23 SLAALQDALASDPSNSELLEVHEELVQAIKDAEEGLLHLKRSRLLREADTVLRGHDSNAA 82
Query: 282 VEDAXXXXXXXXXXXXXXXXXXGFSVGSKCRFRYTDGSWYNGQIIGLDGSRSARVTFLTP 461
ED F VGSKCRFRYTDG WY+G+I+GLDGS SA+++FLTP
Sbjct: 83 -EDVKVEPLDATDIKPEPLEDHSFFVGSKCRFRYTDGRWYDGEIVGLDGSNSAKISFLTP 141
Query: 462 TSENMLICKFFLQQRCRFSTNCRLSHGIDVPLSSLKNYIPTLWKQISVGSNIWAISDPNA 641
T+ENML+CKFFLQQRCRF TNCRLSHG+D+PL+SL++Y+PT+W Q GS+I A+S N
Sbjct: 142 TTENMLMCKFFLQQRCRFGTNCRLSHGVDIPLTSLRSYVPTIWNQSMAGSSILALSSRN- 200
Query: 642 GIWRKAELESWDDTLGLAQVVFQDDGSSREVDGEGLSLSEYAQMXXXXXXXXXXXXXXXX 821
IWR AELESWDD L +AQVVF+ DG S+++ E ++LSEYA +
Sbjct: 201 DIWRHAELESWDDALQVAQVVFKGDGYSQKLGPEDIALSEYALINDEEESDSSLEQSDSS 260
Query: 822 XXXXXXPEGLGFMEAAALQRGIQTDTAVFAKWENHTRGIASKMMANMGYREGMGLGASGQ 1001
+GLGF+E++ Q+GIQT+T +FAKWENHTRGIASKMMANMGYREGMGLGASGQ
Sbjct: 261 DYEEDDLQGLGFLESSTQQKGIQTETTIFAKWENHTRGIASKMMANMGYREGMGLGASGQ 320
Query: 1002 GMVDPITVKVLKPKQSLDHAFDSHKSDG-NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1178
GM++PI VKVL KQSLDHA +S K + N
Sbjct: 321 GMLNPIPVKVLPAKQSLDHALESQKENNTNDENNGKKRSRGGKRKREKKFAAASRAAKEE 380
Query: 1179 XXFNPDVFSFINNQLATQIVHQN-GSLSKRQSKDFGESKNEDRKSLIAYDNEVRDLRVQV 1355
PDVF+ IN+ LA N GS+ K++ K + K DR+++IAYD+EV+DLR+++
Sbjct: 381 EESRPDVFNLINHHLAMHNRALNDGSVKKQKDKGSADWKKVDRRTIIAYDDEVKDLRIRI 440
Query: 1356 EKLEEMVNRNRKEKVVYEAFSRKLSETRKXXXXXXXXXXXXXXXXXXKEKEKRWLKF 1526
EKLEEMVNRN+KEKVVYEA RKL+ETRK +EKEKRWLKF
Sbjct: 441 EKLEEMVNRNKKEKVVYEAALRKLNETRKALAEAEAAHASASNAVNSREKEKRWLKF 497
>ref|XP_004159245.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 18-like [Cucumis sativus]
Length = 497
Score = 457 bits (1175), Expect = e-126
Identities = 243/477 (50%), Positives = 305/477 (63%), Gaps = 2/477 (0%)
Frame = +3
Query: 102 SLTAINEALVLDPTNXXXXXXXXXXXXAIRDAEEGLLHLKRARLLKEADSIFSAQTSKST 281
SL A+ +AL DP+N AI+DAEEGLLHLKR+RLL+EAD++ S +
Sbjct: 23 SLAALQDALASDPSNSELLEVHEELVQAIKDAEEGLLHLKRSRLLREADTVLRGHDSNAA 82
Query: 282 VEDAXXXXXXXXXXXXXXXXXXGFSVGSKCRFRYTDGSWYNGQIIGLDGSRSARVTFLTP 461
ED F VGSKCRFRYTDG WY+G+I+GLDGS SA+++FLTP
Sbjct: 83 -EDVKVEPLDATDIKPEPLEDHSFFVGSKCRFRYTDGRWYDGEIVGLDGSNSAKISFLTP 141
Query: 462 TSENMLICKFFLQQRCRFSTNCRLSHGIDVPLSSLKNYIPTLWKQISVGSNIWAISDPNA 641
T+ENML+CKFFLQQRCRF TNCRLSHG+D+PL+SL++Y+PT+W Q GS+I A+S N
Sbjct: 142 TTENMLMCKFFLQQRCRFGTNCRLSHGVDIPLTSLRSYVPTIWNQSMAGSSILALSSRN- 200
Query: 642 GIWRKAELESWDDTLGLAQVVFQDDGSSREVDGEGLSLSEYAQMXXXXXXXXXXXXXXXX 821
IWR AELESWDD L +AQVVF+ DG S+++ E ++LSEYA +
Sbjct: 201 DIWRHAELESWDDALQVAQVVFKGDGYSQKLGPEDIALSEYALINDEEESDSSLEQSDSS 260
Query: 822 XXXXXXPEGLGFMEAAALQRGIQTDTAVFAKWENHTRGIASKMMANMGYREGMGLGASGQ 1001
+GLGF+E++ Q+GIQT+T +FAKWENHTRGIASKMMANMGYREGMGLGASGQ
Sbjct: 261 DYEEDDLQGLGFLESSTQQKGIQTETTIFAKWENHTRGIASKMMANMGYREGMGLGASGQ 320
Query: 1002 GMVDPITVKVLKPKQSLDHAFDSHKSDG-NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1178
GM++PI VKVL KQSLDHA +S K + N
Sbjct: 321 GMLNPIPVKVLPAKQSLDHALESQKENNTNDENNGKKRSRGGKRKREKKFAAASRAAKEE 380
Query: 1179 XXFNPDVFSFINNQLATQIVHQN-GSLSKRQSKDFGESKNEDRKSLIAYDNEVRDLRVQV 1355
PDVF+ IN+ LA N GS+ K++ K + K DR+++IAYD+EV+DLR+++
Sbjct: 381 EESRPDVFNLINHHLAMHNRALNDGSVKKQKDKGSADGKKVDRRTIIAYDDEVKDLRIRI 440
Query: 1356 EKLEEMVNRNRKEKVVYEAFSRKLSETRKXXXXXXXXXXXXXXXXXXKEKEKRWLKF 1526
EKLEEMVNRN+KEKVVYEA RKL+ETRK +E EKRWLKF
Sbjct: 441 EKLEEMVNRNKKEKVVYEAALRKLNETRKALAEAEAAHASASNAVNSREXEKRWLKF 497