BLASTX nr result

ID: Coptis24_contig00015360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015360
         (825 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616184.1| Armadillo repeat-containing protein [Medicag...    95   2e-17
ref|NP_001242327.1| uncharacterized protein LOC100790639 [Glycin...    92   1e-16
ref|XP_002270403.1| PREDICTED: armadillo repeat-containing prote...    91   2e-16
ref|XP_002298151.1| predicted protein [Populus trichocarpa] gi|2...    89   2e-15
ref|NP_198545.1| armadillo/beta-catenin-like repeat-containing p...    83   9e-14

>ref|XP_003616184.1| Armadillo repeat-containing protein [Medicago truncatula]
           gi|355517519|gb|AES99142.1| Armadillo repeat-containing
           protein [Medicago truncatula]
           gi|388504388|gb|AFK40260.1| unknown [Medicago
           truncatula]
          Length = 178

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 44/54 (81%), Positives = 51/54 (94%)
 Frame = -1

Query: 825 VNYALGALYYLCNNSNKEEILKPEVVEVIKRYAAAGAVSVSFSNLAQAFMEKHL 664
           VNYALGALYY+CN SNKEE+LKPEV++VIKRYAAA  VSVSFSNLA+AF++KHL
Sbjct: 121 VNYALGALYYICNESNKEEVLKPEVIDVIKRYAAAEEVSVSFSNLAKAFLDKHL 174


>ref|NP_001242327.1| uncharacterized protein LOC100790639 [Glycine max]
           gi|255647064|gb|ACU24000.1| unknown [Glycine max]
          Length = 178

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 44/54 (81%), Positives = 50/54 (92%)
 Frame = -1

Query: 825 VNYALGALYYLCNNSNKEEILKPEVVEVIKRYAAAGAVSVSFSNLAQAFMEKHL 664
           VNYALGALYY+CN SNKEEIL+PEVV+VI+RYAAA  VSVSFSNLA+AF+ KHL
Sbjct: 121 VNYALGALYYICNESNKEEILRPEVVDVIRRYAAAEEVSVSFSNLAKAFLSKHL 174


>ref|XP_002270403.1| PREDICTED: armadillo repeat-containing protein 7 [Vitis vinifera]
           gi|297738150|emb|CBI27351.3| unnamed protein product
           [Vitis vinifera]
          Length = 177

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 40/54 (74%), Positives = 52/54 (96%)
 Frame = -1

Query: 825 VNYALGALYYLCNNSNKEEILKPEVVEVIKRYAAAGAVSVSFSNLAQAFMEKHL 664
           VNY +GALYY+CN SNKEEI++PEVV+VIK+YAAAG+VSV+FSNLA+AF++KH+
Sbjct: 121 VNYGIGALYYICNESNKEEIVRPEVVDVIKKYAAAGSVSVNFSNLAKAFLDKHV 174


>ref|XP_002298151.1| predicted protein [Populus trichocarpa] gi|222845409|gb|EEE82956.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 41/54 (75%), Positives = 50/54 (92%)
 Frame = -1

Query: 825 VNYALGALYYLCNNSNKEEILKPEVVEVIKRYAAAGAVSVSFSNLAQAFMEKHL 664
           VNYALG+LYYLCN+S KEEILKPEV++VIKRYAA   V+VSFSNLA+AF++KH+
Sbjct: 121 VNYALGSLYYLCNSSTKEEILKPEVLDVIKRYAACETVNVSFSNLAKAFLDKHV 174


>ref|NP_198545.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis
           thaliana] gi|9758715|dbj|BAB09101.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|98960935|gb|ABF58951.1| At5g37290 [Arabidopsis
           thaliana] gi|332006778|gb|AED94161.1|
           armadillo/beta-catenin-like repeat-containing protein
           [Arabidopsis thaliana]
          Length = 180

 Score = 82.8 bits (203), Expect = 9e-14
 Identities = 40/60 (66%), Positives = 52/60 (86%), Gaps = 2/60 (3%)
 Frame = -1

Query: 825 VNYALGALYYLC--NNSNKEEILKPEVVEVIKRYAAAGAVSVSFSNLAQAFMEKHLPGQT 652
           VNYALGALYY+C  N + +EEIL+PEVV++I+RYAAA +VSVSFSNLA+AF++KH+   T
Sbjct: 121 VNYALGALYYMCDYNRATREEILRPEVVDLIERYAAAESVSVSFSNLAKAFLDKHVHANT 180


Top