BLASTX nr result

ID: Coptis24_contig00015356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015356
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161600.1| PREDICTED: putative prolyl 4-hydroxylase-lik...    80   2e-13
ref|XP_004152082.1| PREDICTED: putative prolyl 4-hydroxylase-lik...    80   2e-13
ref|NP_181836.1| P4H isoform 1 [Arabidopsis thaliana] gi|3763917...    79   4e-13
ref|XP_002880022.1| AT-P4H-1 [Arabidopsis lyrata subsp. lyrata] ...    77   2e-12
ref|XP_002302889.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12

>ref|XP_004161600.1| PREDICTED: putative prolyl 4-hydroxylase-like [Cucumis sativus]
          Length = 137

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 44/86 (51%), Positives = 54/86 (62%), Gaps = 23/86 (26%)
 Frame = +3

Query: 108 IIMFSMKIVFGLLTFVTVGMIIGSLFQLAFITRWEESSGGS------------------- 230
           ++   M+IVFGLLTFVTVGMIIG+L QLAF+ R E+S G                     
Sbjct: 1   MVSSQMRIVFGLLTFVTVGMIIGALLQLAFLRRLEDSIGTEFLPAGRLHKAQYDSQHQLP 60

Query: 231 ----HWINDKEAEVLRLGFVKPEIVS 296
               +WINDKEAE+LRLG+VKPE+VS
Sbjct: 61  RGFPNWINDKEAEILRLGYVKPEVVS 86


>ref|XP_004152082.1| PREDICTED: putative prolyl 4-hydroxylase-like [Cucumis sativus]
          Length = 290

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 44/86 (51%), Positives = 54/86 (62%), Gaps = 23/86 (26%)
 Frame = +3

Query: 108 IIMFSMKIVFGLLTFVTVGMIIGSLFQLAFITRWEESSGGS------------------- 230
           ++   M+IVFGLLTFVTVGMIIG+L QLAF+ R E+S G                     
Sbjct: 1   MVSSQMRIVFGLLTFVTVGMIIGALLQLAFLRRLEDSIGTEFLPAGRLHKAQYDSQHQLP 60

Query: 231 ----HWINDKEAEVLRLGFVKPEIVS 296
               +WINDKEAE+LRLG+VKPE+VS
Sbjct: 61  RGFPNWINDKEAEILRLGYVKPEVVS 86


>ref|NP_181836.1| P4H isoform 1 [Arabidopsis thaliana] gi|3763917|gb|AAC64297.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|20197628|gb|AAM15158.1| hypothetical protein
           [Arabidopsis thaliana] gi|26450452|dbj|BAC42340.1|
           unknown protein [Arabidopsis thaliana]
           gi|29824245|gb|AAP04083.1| unknown protein [Arabidopsis
           thaliana] gi|330255112|gb|AEC10206.1| P4H isoform 1
           [Arabidopsis thaliana]
          Length = 283

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 44/78 (56%), Positives = 51/78 (65%), Gaps = 19/78 (24%)
 Frame = +3

Query: 120 SMKIVFGLLTFVTVGMIIGSLFQLAFITRWEESSGG-------------------SHWIN 242
           +MKIVFGLLTFVTVGM+IGSL QLAFI R E+S G                    S W N
Sbjct: 4   AMKIVFGLLTFVTVGMVIGSLLQLAFINRLEDSYGTGFPSLRGLRGQNTRYLRDVSRWAN 63

Query: 243 DKEAEVLRLGFVKPEIVS 296
           DK+AE+LR+G VKPE+VS
Sbjct: 64  DKDAELLRIGNVKPEVVS 81


>ref|XP_002880022.1| AT-P4H-1 [Arabidopsis lyrata subsp. lyrata]
           gi|297325861|gb|EFH56281.1| AT-P4H-1 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 283

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 43/78 (55%), Positives = 50/78 (64%), Gaps = 19/78 (24%)
 Frame = +3

Query: 120 SMKIVFGLLTFVTVGMIIGSLFQLAFITRWEESSGG-------------------SHWIN 242
           +MKIVFGLLTFVTVGM+I SL QLAFI R E+S G                    S W N
Sbjct: 4   AMKIVFGLLTFVTVGMVIASLLQLAFINRLEDSYGPGFPSLRGLRGQNTRYLRDVSRWAN 63

Query: 243 DKEAEVLRLGFVKPEIVS 296
           DK+AE+LR+G VKPE+VS
Sbjct: 64  DKDAELLRIGNVKPEVVS 81


>ref|XP_002302889.1| predicted protein [Populus trichocarpa] gi|222844615|gb|EEE82162.1|
           predicted protein [Populus trichocarpa]
          Length = 287

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 42/82 (51%), Positives = 49/82 (59%), Gaps = 23/82 (28%)
 Frame = +3

Query: 120 SMKIVFGLLTFVTVGMIIGSLFQLAFITRWEESSGG-----------------------S 230
           SMKIVFGLL FVT GMI+G+ FQLAFI + E+S G                        S
Sbjct: 4   SMKIVFGLLAFVTAGMIVGAFFQLAFILKLEDSYGTKFPSFKRVRKLQSDAYLQLPRGIS 63

Query: 231 HWINDKEAEVLRLGFVKPEIVS 296
           HW ND EA VLR+G+VKPEI+S
Sbjct: 64  HWDNDTEAAVLRIGYVKPEIIS 85


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