BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015341
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chlor...   153   3e-35
emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera]   153   3e-35
ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   151   7e-35
ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chlor...   151   7e-35
ref|XP_003523282.1| PREDICTED: RNA pseudourine synthase 2, chlor...   150   2e-34

>ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Vitis
           vinifera] gi|302141717|emb|CBI18920.3| unnamed protein
           product [Vitis vinifera]
          Length = 433

 Score =  153 bits (386), Expect = 3e-35
 Identities = 72/99 (72%), Positives = 82/99 (82%)
 Frame = +3

Query: 3   TGRTHQIRAHAKYLGIPLLGDEVYGGTKSMALSLLQPRISSSHRADLTKLVSMLERPCLH 182
           TGRTHQIRAHAKYLGIPLLGDEVYGGTK+MALSLL+PRI SSH   L +LVS L+RPCLH
Sbjct: 329 TGRTHQIRAHAKYLGIPLLGDEVYGGTKNMALSLLRPRIPSSHHGQLAQLVSRLDRPCLH 388

Query: 183 ALALGFKHPHTGERIKFSCAPPADFVETLSLLRNMGSKK 299
           A+ALGF HP TG+ + FSC PP DF E LS LR + ++K
Sbjct: 389 AVALGFNHPKTGKNVHFSCQPPEDFAEILSWLRKISTEK 427


>emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera]
          Length = 611

 Score =  153 bits (386), Expect = 3e-35
 Identities = 72/99 (72%), Positives = 82/99 (82%)
 Frame = +3

Query: 3   TGRTHQIRAHAKYLGIPLLGDEVYGGTKSMALSLLQPRISSSHRADLTKLVSMLERPCLH 182
           TGRTHQIRAHAKYLGIPLLGDEVYGGTK+MALSLL+PRI SSH   L +LVS L+RPCLH
Sbjct: 475 TGRTHQIRAHAKYLGIPLLGDEVYGGTKNMALSLLRPRIPSSHHGQLAQLVSRLDRPCLH 534

Query: 183 ALALGFKHPHTGERIKFSCAPPADFVETLSLLRNMGSKK 299
           A+ALGF HP TG+ + FSC PP DF E LS LR + ++K
Sbjct: 535 AVALGFNHPKTGKNVHFSCQPPEDFAEILSWLRKISTEK 573


>ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 2,
           chloroplastic-like [Cucumis sativus]
          Length = 452

 Score =  151 bits (382), Expect = 7e-35
 Identities = 72/99 (72%), Positives = 82/99 (82%)
 Frame = +3

Query: 3   TGRTHQIRAHAKYLGIPLLGDEVYGGTKSMALSLLQPRISSSHRADLTKLVSMLERPCLH 182
           TGRTHQIRAHAKY+GIPLLGDEVYGGTKSMA+SLL+ R SS+    L +LVS LERPCLH
Sbjct: 327 TGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLH 386

Query: 183 ALALGFKHPHTGERIKFSCAPPADFVETLSLLRNMGSKK 299
           AL LGF HPHTG+ I+FSC PP DF E LS LR +G++K
Sbjct: 387 ALTLGFVHPHTGKNIRFSCPPPTDFTEILSQLREIGTQK 425


>ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Cucumis
           sativus]
          Length = 453

 Score =  151 bits (382), Expect = 7e-35
 Identities = 72/99 (72%), Positives = 82/99 (82%)
 Frame = +3

Query: 3   TGRTHQIRAHAKYLGIPLLGDEVYGGTKSMALSLLQPRISSSHRADLTKLVSMLERPCLH 182
           TGRTHQIRAHAKY+GIPLLGDEVYGGTKSMA+SLL+ R SS+    L +LVS LERPCLH
Sbjct: 328 TGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLH 387

Query: 183 ALALGFKHPHTGERIKFSCAPPADFVETLSLLRNMGSKK 299
           AL LGF HPHTG+ I+FSC PP DF E LS LR +G++K
Sbjct: 388 ALTLGFVHPHTGKNIRFSCPPPTDFTEILSQLREIGTQK 426


>ref|XP_003523282.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Glycine
           max]
          Length = 450

 Score =  150 bits (379), Expect = 2e-34
 Identities = 70/101 (69%), Positives = 82/101 (81%)
 Frame = +3

Query: 3   TGRTHQIRAHAKYLGIPLLGDEVYGGTKSMALSLLQPRISSSHRADLTKLVSMLERPCLH 182
           TGRTHQIRAHAKYLG+PLLGDE+YGGTKSM LSLL+PR   S  + + K+VS L+RPCLH
Sbjct: 343 TGRTHQIRAHAKYLGVPLLGDELYGGTKSMVLSLLRPRTPISLHSKIVKMVSRLDRPCLH 402

Query: 183 ALALGFKHPHTGERIKFSCAPPADFVETLSLLRNMGSKKTS 305
           A  LGF+HPHTGE++ FSC PPADF E LS LR +GS+  S
Sbjct: 403 AWTLGFQHPHTGEQVHFSCEPPADFAEILSQLRRIGSETVS 443