BLASTX nr result

ID: Coptis24_contig00015340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015340
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA87073.1| pathogenesis-related protein PR-6 type [Sambucus...    84   2e-14
ref|XP_003617314.1| protease inhibitor [Medicago truncatula] gi|...    74   9e-12
pdb|3RDY|A Chain A, Crystal Structure Of Buckwheat Trypsin Inhib...    73   3e-11
gb|AAB35320.1| BWI-1=protease inhibitor/trypsin inhibitor [Fagop...    73   3e-11
gb|AAB46906.1| BTI-2=trypsin inhibitor isoform [Fagopyrum escule...    73   3e-11

>emb|CAA87073.1| pathogenesis-related protein PR-6 type [Sambucus nigra]
          Length = 79

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 40/70 (57%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
 Frame = -1

Query: 402 SECGGVGKKAWPELLGVREQRAVQTIETENRNVRAVIIPQGSVITPDIRCDRVRVFVHQ- 226
           S C  VGK  WPEL G R + A  T+ETEN +V AVI+P+GS++T D RCDRVRV+V + 
Sbjct: 10  SHCRDVGKNTWPELCGARGEEAAATVETENPSVTAVIVPEGSIVTTDERCDRVRVWVDEN 69

Query: 225 GRVIEVPVVG 196
           G V  VPV+G
Sbjct: 70  GIVTRVPVIG 79


>ref|XP_003617314.1| protease inhibitor [Medicago truncatula]
           gi|355518649|gb|AET00273.1| protease inhibitor [Medicago
           truncatula]
          Length = 70

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 37/72 (51%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
 Frame = -1

Query: 408 MASECGGVGKKAWPELLGVREQRAVQTIETENRNVRAVIIPQGSVITPDIRCDRVRVFVH 229
           M+ EC G  K +WPEL+GV  + A  TI++EN  V A+I+P+GS +T D RCDRVRV+V 
Sbjct: 1   MSDECKG--KNSWPELVGVEGKVAEATIQSENPLVNAIIVPEGSFVTADFRCDRVRVWVD 58

Query: 228 Q-GRVIEVPVVG 196
           + G V +VP++G
Sbjct: 59  KDGIVYQVPIIG 70


>pdb|3RDY|A Chain A, Crystal Structure Of Buckwheat Trypsin Inhibitor Rbti At
           1.84 Angstrom Resolution gi|339717625|pdb|3RDZ|C Chain
           C, Crystal Structure Of Rbti-Trypsin Complex At 2.26
           Angstrom Resolution gi|339717627|pdb|3RDZ|D Chain D,
           Crystal Structure Of Rbti-Trypsin Complex At 2.26
           Angstrom Resolution
          Length = 79

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 33/63 (52%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
 Frame = -1

Query: 384 GKKAWPELLGVREQRAVQTIETENRNVRAVIIPQGSVITPDIRCDRVRVFV-HQGRVIEV 208
           GK+ WPEL+G R  +A + IE EN +VRA+++P+GS +  D+RCDRV VFV  +G V++ 
Sbjct: 16  GKQEWPELVGERGSKAAKIIENENEDVRAIVLPEGSAVPRDLRCDRVWVFVDERGVVVDT 75

Query: 207 PVV 199
           PVV
Sbjct: 76  PVV 78


>gb|AAB35320.1| BWI-1=protease inhibitor/trypsin inhibitor [Fagopyrum
           esculentum=buckwheat plants, cv. Shatilovskaya-5, seeds,
           Peptide, 69 aa] gi|109138554|gb|AAP84344.2| proteinase
           inhibitor [Fagopyrum esculentum]
          Length = 69

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 33/63 (52%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
 Frame = -1

Query: 384 GKKAWPELLGVREQRAVQTIETENRNVRAVIIPQGSVITPDIRCDRVRVFV-HQGRVIEV 208
           GK+ WPEL+G R  +A + IE EN +VRA+++P+GS +  D+RCDRV VFV  +G V++ 
Sbjct: 6   GKQEWPELVGERGSKAAKIIENENEDVRAIVLPEGSAVPRDLRCDRVWVFVDERGVVVDT 65

Query: 207 PVV 199
           PVV
Sbjct: 66  PVV 68


>gb|AAB46906.1| BTI-2=trypsin inhibitor isoform [Fagopyrum esculentum=buckwheat,
           Monch, seeds, Peptide, 69 aa]
          Length = 69

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 33/63 (52%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
 Frame = -1

Query: 384 GKKAWPELLGVREQRAVQTIETENRNVRAVIIPQGSVITPDIRCDRVRVFV-HQGRVIEV 208
           GK+ WPEL+G R  +A + IE EN +VRA+++P+GS +  D+RCDRV VFV  +G V++ 
Sbjct: 6   GKQEWPELVGERGSKAAKIIENENEDVRAIVLPEGSAVPRDLRCDRVWVFVDERGVVVDT 65

Query: 207 PVV 199
           PVV
Sbjct: 66  PVV 68


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