BLASTX nr result

ID: Coptis24_contig00015336 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015336
         (1131 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277845.1| PREDICTED: uncharacterized protein C9orf114 ...   419   e-115
emb|CAN75987.1| hypothetical protein VITISV_012192 [Vitis vinifera]   417   e-114
ref|XP_002311607.1| predicted protein [Populus trichocarpa] gi|2...   401   e-109
ref|XP_003631986.1| PREDICTED: uncharacterized protein C9orf114 ...   400   e-109
ref|XP_002517202.1| Protein C9orf114, putative [Ricinus communis...   399   e-109

>ref|XP_002277845.1| PREDICTED: uncharacterized protein C9orf114 isoform 1 [Vitis
           vinifera] gi|297737011|emb|CBI26212.3| unnamed protein
           product [Vitis vinifera]
          Length = 363

 Score =  419 bits (1076), Expect = e-115
 Identities = 201/284 (70%), Positives = 238/284 (83%)
 Frame = +2

Query: 128 PTVSIAIAGSIIDNAQSLELATRLAGQIARAAAIFRVDEIVVFDNKNTAMHDSSVXXXXX 307
           PT++IA+ GSII NAQSLELATRLAGQIARAA IFR+DE+VVFD K+T+  DS+V     
Sbjct: 51  PTLTIAVPGSIIHNAQSLELATRLAGQIARAATIFRIDEVVVFDCKSTSGDDSTVATPDA 110

Query: 308 XXXXXXXAPFLIRILKYLETPQYLRRSLFPMHSSLRCVGTLPPLDAPHHLRKHEWGPYRE 487
                    FLIRIL+YLETPQYLR++LFP H+SL+ VG LPP+DAPHHLRKHEWGPYRE
Sbjct: 111 SDENETGPAFLIRILRYLETPQYLRKTLFPKHNSLKFVGMLPPVDAPHHLRKHEWGPYRE 170

Query: 488 GITLKEKTSDLTGTLVDVGLSRNVVVDETLEPGIRVTVAMGTNRHFGTEHLHKVVPSSMP 667
           G+TLKE+     GTLVDVGL++NVV+D+ LEPGIRVTVAMGTNR+   + +H+VV SS P
Sbjct: 171 GVTLKERAPSSVGTLVDVGLNKNVVIDQVLEPGIRVTVAMGTNRNLDADFVHQVVSSSKP 230

Query: 668 REDAGLYWGYKVRYASTINSVFKDCPYTGGYNHTIGTSEHGLIIKSSDLTIPTFSHLLIA 847
           RE+ G YWGYKVRYAS I+SVFK+CP+ GGY+H IGTSEHGLI+KSS+L IP+F HLLIA
Sbjct: 231 REEVGTYWGYKVRYASNISSVFKECPFKGGYDHLIGTSEHGLIVKSSELDIPSFRHLLIA 290

Query: 848 FGGLAGLEESIEEDGSLKGKDANKVFDSYLNTCPHQGSRTIRIE 979
           FGGLAGLEES+EED SLKGK+  ++FDSYLNTCP+QGSRTIR E
Sbjct: 291 FGGLAGLEESVEEDNSLKGKNVREIFDSYLNTCPNQGSRTIRTE 334


>emb|CAN75987.1| hypothetical protein VITISV_012192 [Vitis vinifera]
          Length = 363

 Score =  417 bits (1073), Expect = e-114
 Identities = 201/284 (70%), Positives = 238/284 (83%)
 Frame = +2

Query: 128 PTVSIAIAGSIIDNAQSLELATRLAGQIARAAAIFRVDEIVVFDNKNTAMHDSSVXXXXX 307
           PT++IA+ GSII NAQSLELATRLAGQ+ARAA IFR+DE+VVFD K+T+  +S+V     
Sbjct: 51  PTLTIAVPGSIIHNAQSLELATRLAGQVARAATIFRIDEVVVFDCKSTSGDNSTVATPDA 110

Query: 308 XXXXXXXAPFLIRILKYLETPQYLRRSLFPMHSSLRCVGTLPPLDAPHHLRKHEWGPYRE 487
                  A FLIRIL+YLETPQYLR+ LFP H+SL+ VG LPPLDAPHHLRKHEWGPYRE
Sbjct: 111 SDENETGAAFLIRILRYLETPQYLRKILFPKHNSLKFVGMLPPLDAPHHLRKHEWGPYRE 170

Query: 488 GITLKEKTSDLTGTLVDVGLSRNVVVDETLEPGIRVTVAMGTNRHFGTEHLHKVVPSSMP 667
           G+TLKE+     GTLVDVGL++NVV+D+ LEPGIRVTVAMGTNR+   + +H+VV SS P
Sbjct: 171 GVTLKERAPSSVGTLVDVGLNKNVVIDQVLEPGIRVTVAMGTNRNLDADFVHQVVSSSKP 230

Query: 668 REDAGLYWGYKVRYASTINSVFKDCPYTGGYNHTIGTSEHGLIIKSSDLTIPTFSHLLIA 847
           RE+ G YWGYKVRYAS I+SVFK+CP+ GGY+H IGTSEHGLI+KSS+L IP+F HLLIA
Sbjct: 231 REEVGTYWGYKVRYASNISSVFKECPFKGGYDHLIGTSEHGLIVKSSELDIPSFRHLLIA 290

Query: 848 FGGLAGLEESIEEDGSLKGKDANKVFDSYLNTCPHQGSRTIRIE 979
           FGGLAGLEES+EED SLKGK+  ++FDSYLNTCP+QGSRTIR E
Sbjct: 291 FGGLAGLEESVEEDHSLKGKNVREIFDSYLNTCPNQGSRTIRTE 334


>ref|XP_002311607.1| predicted protein [Populus trichocarpa] gi|222851427|gb|EEE88974.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score =  401 bits (1031), Expect = e-109
 Identities = 197/285 (69%), Positives = 231/285 (81%), Gaps = 1/285 (0%)
 Frame = +2

Query: 128 PTVSIAIAGSIIDNAQSLELATRLAGQIARAAAIFRVDEIVVFDNK-NTAMHDSSVXXXX 304
           PTVS+AI+GSII+NAQSLELATRLAGQIARAA IFR+DE+VVFDNK N    D ++    
Sbjct: 59  PTVSVAISGSIINNAQSLELATRLAGQIARAATIFRIDEVVVFDNKSNYEKEDRTLTTDN 118

Query: 305 XXXXXXXXAPFLIRILKYLETPQYLRRSLFPMHSSLRCVGTLPPLDAPHHLRKHEWGPYR 484
                   A F +RIL+YLETPQYLR++LFP H +LR VG LPPLDAPHHLRKHEW P+R
Sbjct: 119 YSDENESGAAFFVRILRYLETPQYLRKALFPKHCNLRFVGMLPPLDAPHHLRKHEWAPFR 178

Query: 485 EGITLKEKTSDLTGTLVDVGLSRNVVVDETLEPGIRVTVAMGTNRHFGTEHLHKVVPSSM 664
           EG+TL EK  +   TLVDVGLS+NV +++ LEPGIRVTVAMGTNR+  ++   +VV    
Sbjct: 179 EGVTLNEKVPNSGETLVDVGLSKNVSINQVLEPGIRVTVAMGTNRNLDSDSPRQVVSLLK 238

Query: 665 PREDAGLYWGYKVRYASTINSVFKDCPYTGGYNHTIGTSEHGLIIKSSDLTIPTFSHLLI 844
           PRE+AG+YWGY+VRYAS I+SVFKDCPY GGY+H IGTSEHGLII SS+L++P F HLLI
Sbjct: 239 PREEAGMYWGYRVRYASNISSVFKDCPYKGGYDHLIGTSEHGLIINSSELSLPAFRHLLI 298

Query: 845 AFGGLAGLEESIEEDGSLKGKDANKVFDSYLNTCPHQGSRTIRIE 979
           AFGGLAGLEE IEED +LKGK+  +VFDSYLNTCPHQGSRTIR E
Sbjct: 299 AFGGLAGLEECIEEDSNLKGKNVREVFDSYLNTCPHQGSRTIRTE 343


>ref|XP_003631986.1| PREDICTED: uncharacterized protein C9orf114 isoform 2 [Vitis
           vinifera]
          Length = 359

 Score =  400 bits (1029), Expect = e-109
 Identities = 196/285 (68%), Positives = 232/285 (81%), Gaps = 1/285 (0%)
 Frame = +2

Query: 128 PTVSIAIAGSIIDNAQSLELATRLAGQIARAAAIFRVDEIVVFDNKNTAMHDSSVXXXXX 307
           PT++IA+ GSII NAQSLELATRLAGQIARAA IFR+DE+ +  N +      SV     
Sbjct: 51  PTLTIAVPGSIIHNAQSLELATRLAGQIARAATIFRIDEVCIVMNSSR-----SVELLIN 105

Query: 308 XXXXXXXAP-FLIRILKYLETPQYLRRSLFPMHSSLRCVGTLPPLDAPHHLRKHEWGPYR 484
                   P FLIRIL+YLETPQYLR++LFP H+SL+ VG LPP+DAPHHLRKHEWGPYR
Sbjct: 106 ASDENETGPAFLIRILRYLETPQYLRKTLFPKHNSLKFVGMLPPVDAPHHLRKHEWGPYR 165

Query: 485 EGITLKEKTSDLTGTLVDVGLSRNVVVDETLEPGIRVTVAMGTNRHFGTEHLHKVVPSSM 664
           EG+TLKE+     GTLVDVGL++NVV+D+ LEPGIRVTVAMGTNR+   + +H+VV SS 
Sbjct: 166 EGVTLKERAPSSVGTLVDVGLNKNVVIDQVLEPGIRVTVAMGTNRNLDADFVHQVVSSSK 225

Query: 665 PREDAGLYWGYKVRYASTINSVFKDCPYTGGYNHTIGTSEHGLIIKSSDLTIPTFSHLLI 844
           PRE+ G YWGYKVRYAS I+SVFK+CP+ GGY+H IGTSEHGLI+KSS+L IP+F HLLI
Sbjct: 226 PREEVGTYWGYKVRYASNISSVFKECPFKGGYDHLIGTSEHGLIVKSSELDIPSFRHLLI 285

Query: 845 AFGGLAGLEESIEEDGSLKGKDANKVFDSYLNTCPHQGSRTIRIE 979
           AFGGLAGLEES+EED SLKGK+  ++FDSYLNTCP+QGSRTIR E
Sbjct: 286 AFGGLAGLEESVEEDNSLKGKNVREIFDSYLNTCPNQGSRTIRTE 330


>ref|XP_002517202.1| Protein C9orf114, putative [Ricinus communis]
           gi|223543837|gb|EEF45365.1| Protein C9orf114, putative
           [Ricinus communis]
          Length = 369

 Score =  399 bits (1025), Expect = e-109
 Identities = 195/285 (68%), Positives = 236/285 (82%), Gaps = 2/285 (0%)
 Frame = +2

Query: 131 TVSIAIAGSIIDNAQSLELATRLAGQIARAAAIFRVDEIVVFDNKNTAMHD--SSVXXXX 304
           T+SIA+ GSIIDNAQSLELATRLAGQIARAA IFR+DE+VVFDN+++++ +  +++    
Sbjct: 62  TISIAVPGSIIDNAQSLELATRLAGQIARAATIFRIDEVVVFDNESSSVKEDRTTMITGN 121

Query: 305 XXXXXXXXAPFLIRILKYLETPQYLRRSLFPMHSSLRCVGTLPPLDAPHHLRKHEWGPYR 484
                   A FLIRIL+YLETPQYLR++LFP  +SLR VG LPPLDAPHHLRKHEW P+R
Sbjct: 122 NSDENESGAAFLIRILRYLETPQYLRKALFPRLNSLRFVGLLPPLDAPHHLRKHEWAPFR 181

Query: 485 EGITLKEKTSDLTGTLVDVGLSRNVVVDETLEPGIRVTVAMGTNRHFGTEHLHKVVPSSM 664
           EG+TLKEK  +  GTLVDVGLS+NVV+D+ +EPGIRVTV MGT+R+  +E   +VV  S 
Sbjct: 182 EGVTLKEKAPNSIGTLVDVGLSKNVVIDQVVEPGIRVTVEMGTDRNLDSELPRQVVSLSK 241

Query: 665 PREDAGLYWGYKVRYASTINSVFKDCPYTGGYNHTIGTSEHGLIIKSSDLTIPTFSHLLI 844
           PRE+AG+YWGY+VRYAS I++VF DCPY GGY+H +GTSEHG II +S L++PTF HLLI
Sbjct: 242 PREEAGMYWGYRVRYASNISTVFNDCPYKGGYDHLVGTSEHGQIINASKLSLPTFRHLLI 301

Query: 845 AFGGLAGLEESIEEDGSLKGKDANKVFDSYLNTCPHQGSRTIRIE 979
           AFGGLAGLEESIEED SLKGK+  +VF+SYLNTCPHQGSRTIR E
Sbjct: 302 AFGGLAGLEESIEEDNSLKGKNVREVFNSYLNTCPHQGSRTIRTE 346


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