BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015271
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA39253.1| TPA: hypothetical protein ZEAMMB73_547579 [Zea m...    59   3e-07
gb|AEJ07903.1| putative PIFa transposase [Zea mays subsp. mexicana]    57   1e-06
ref|NP_001170215.1| uncharacterized protein LOC100384166 [Zea ma...    57   1e-06
tpg|DAA40725.1| TPA: hypothetical protein ZEAMMB73_966448 [Zea m...    56   3e-06
tpg|DAA47253.1| TPA: hypothetical protein ZEAMMB73_449035 [Zea m...    55   8e-06

>tpg|DAA39253.1| TPA: hypothetical protein ZEAMMB73_547579 [Zea mays]
          Length = 261

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
 Frame = +1

Query: 85  IRWNDRMDKVLVGTLFDIITVLGKGFQNSNVSKKETLVQVASVVTNYCSQKVEWDNVRSR 264
           + WND MDKVL+ T  D      KG +  N  K      V   V   C+  +  +N+ SR
Sbjct: 12  VPWNDEMDKVLLDTFVDYYN---KGDRCQNGWKSHVYTAVVKNVCEKCNVTITKENISSR 68

Query: 265 LRSLRGAYTVAAGLLGQSGFSFNHQTKYIQADAD-VWERYIQ 387
            ++    Y +  GLL  SGF ++ +   ++ D+D VW+ YI+
Sbjct: 69  SKTFDKHYNIINGLLSTSGFGWDWEKNKLKVDSDTVWDEYIE 110


>gb|AEJ07903.1| putative PIFa transposase [Zea mays subsp. mexicana]
          Length = 558

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
 Frame = +1

Query: 85  IRWNDRMDKVLVGTLFDIITVLGKGFQNSNVSKKETLVQVASVVTNYCSQKVEWDNVRSR 264
           + WND MDKVL+ T  D      KG +  N  K          V   C+  +  +N+ SR
Sbjct: 309 VPWNDEMDKVLLDTFVDYYN---KGDRCQNGWKSHVYTAAVKNVCEKCNVTITKENISSR 365

Query: 265 LRSLRGAYTVAAGLLGQSGFSFNHQTKYIQADAD-VWERYIQ 387
            ++    Y +  GLL  SGF ++ +   ++ D+D VW+ Y++
Sbjct: 366 SKTFDKHYNIINGLLSTSGFGWDWEKNKLKVDSDTVWDEYVE 407


>ref|NP_001170215.1| uncharacterized protein LOC100384166 [Zea mays]
           gi|224034399|gb|ACN36275.1| unknown [Zea mays]
          Length = 261

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
 Frame = +1

Query: 85  IRWNDRMDKVLVGTLFDIITVLGKGFQNSNVSKKETLVQVASVVTNYCSQKVEWDNVRSR 264
           + WND MDKVL+ T  D      KG +  N  K          V   C+  +  +N+ SR
Sbjct: 12  VPWNDEMDKVLLDTFVDYYN---KGDRCQNGWKSHVYTAAVKNVCEKCNVTITKENISSR 68

Query: 265 LRSLRGAYTVAAGLLGQSGFSFNHQTKYIQADAD-VWERYIQ 387
            ++    Y +  GLL  SGF ++ +   ++ D+D VW+ Y++
Sbjct: 69  SKTFDKHYNIINGLLSTSGFGWDWEKNKLKVDSDTVWDEYVE 110


>tpg|DAA40725.1| TPA: hypothetical protein ZEAMMB73_966448 [Zea mays]
          Length = 206

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
 Frame = +1

Query: 73  GKRQIRWNDRMDKVLVGTLFDIITVLGKGFQNSNVSKKETLVQVASVVTNYCSQKVEWDN 252
           G+  I WND MDK L+ T    +    KG +  N  K          V   C+ ++  DN
Sbjct: 10  GRGYISWNDDMDKALLDTF---VEYYNKGDRCQNGWKSHVYTAAIKNVREKCNVEITKDN 66

Query: 253 VRSRLRSLRGAYTVAAGLLGQSGFSFNHQTKYIQADAD-VWERYI 384
           + SR ++    +T+  G+L  SGF ++     I  D+D VWE Y+
Sbjct: 67  IMSRNKTFDKHHTIINGMLETSGFGWDWNKNKISVDSDSVWEAYV 111


>tpg|DAA47253.1| TPA: hypothetical protein ZEAMMB73_449035 [Zea mays]
          Length = 213

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
 Frame = +1

Query: 73  GKRQIRWNDRMDKVLVGTLFDIITVLGKGFQNSNVSKKETLVQVASVVTNYCSQKVEWDN 252
           G+  I WND MDK L+ T    +    KG +  N  K          V   C+ ++  DN
Sbjct: 34  GRGYISWNDDMDKALLDTF---VEYYNKGDRCQNGWKSHVYTAANKNVREKCNVEITKDN 90

Query: 253 VRSRLRSLRGAYTVAAGLLGQSGFSFNHQTKYIQADAD-VWERYI 384
           + SR ++    +T+  G+L  SGF ++     I  D+D VWE Y+
Sbjct: 91  IMSRNKTFDKHHTIINGMLETSGFVWDWNKNKISIDSDSVWEAYV 135