BLASTX nr result

ID: Coptis24_contig00015269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015269
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21231.3| unnamed protein product [Vitis vinifera]               71   8e-11
ref|XP_002278830.1| PREDICTED: monothiol glutaredoxin-S14, chlor...    71   8e-11
gb|AFK47108.1| unknown [Lotus japonicus]                               69   4e-10
ref|XP_003624127.1| Glutaredoxin-like protein [Medicago truncatu...    66   3e-09
ref|XP_004152834.1| PREDICTED: monothiol glutaredoxin-S14, chlor...    65   3e-09

>emb|CBI21231.3| unnamed protein product [Vitis vinifera]
          Length = 183

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/37 (86%), Positives = 36/37 (97%)
 Frame = -3

Query: 111 TFRCYSALNPELKTTLDKVVTSNKVILFMKGTKDFPQ 1
           +FRC+SAL PELKTTLDKVVTSNKV+LFMKGTK+FPQ
Sbjct: 70  SFRCFSALTPELKTTLDKVVTSNKVVLFMKGTKEFPQ 106


>ref|XP_002278830.1| PREDICTED: monothiol glutaredoxin-S14, chloroplastic-like [Vitis
           vinifera]
          Length = 175

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/37 (86%), Positives = 36/37 (97%)
 Frame = -3

Query: 111 TFRCYSALNPELKTTLDKVVTSNKVILFMKGTKDFPQ 1
           +FRC+SAL PELKTTLDKVVTSNKV+LFMKGTK+FPQ
Sbjct: 62  SFRCFSALTPELKTTLDKVVTSNKVVLFMKGTKEFPQ 98


>gb|AFK47108.1| unknown [Lotus japonicus]
          Length = 182

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/38 (84%), Positives = 35/38 (92%)
 Frame = -3

Query: 114 STFRCYSALNPELKTTLDKVVTSNKVILFMKGTKDFPQ 1
           +T RC SAL PELK+TLDKVVTSNKV+LFMKGTKDFPQ
Sbjct: 68  TTIRCSSALTPELKSTLDKVVTSNKVVLFMKGTKDFPQ 105


>ref|XP_003624127.1| Glutaredoxin-like protein [Medicago truncatula]
           gi|355499142|gb|AES80345.1| Glutaredoxin-like protein
           [Medicago truncatula] gi|388516461|gb|AFK46292.1|
           unknown [Medicago truncatula]
          Length = 181

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 32/38 (84%), Positives = 35/38 (92%)
 Frame = -3

Query: 114 STFRCYSALNPELKTTLDKVVTSNKVILFMKGTKDFPQ 1
           +T RC SAL PELKTTLDKVVTSNK++LFMKGTKDFPQ
Sbjct: 68  TTIRC-SALTPELKTTLDKVVTSNKIVLFMKGTKDFPQ 104


>ref|XP_004152834.1| PREDICTED: monothiol glutaredoxin-S14, chloroplastic-like [Cucumis
           sativus] gi|449477685|ref|XP_004155093.1| PREDICTED:
           monothiol glutaredoxin-S14, chloroplastic-like [Cucumis
           sativus]
          Length = 178

 Score = 65.1 bits (157), Expect(2) = 3e-09
 Identities = 28/37 (75%), Positives = 34/37 (91%)
 Frame = -3

Query: 111 TFRCYSALNPELKTTLDKVVTSNKVILFMKGTKDFPQ 1
           +FRC S L+PELKTT+DKV+TS KV+LFMKG+KDFPQ
Sbjct: 65  SFRCLSGLSPELKTTIDKVITSEKVVLFMKGSKDFPQ 101



 Score = 21.2 bits (43), Expect(2) = 3e-09
 Identities = 12/31 (38%), Positives = 12/31 (38%)
 Frame = -1

Query: 218 PTNPPHSSSLLTNSVFHLSPTTTTPVFLTRH 126
           P  P  SSS  TN    L P       L RH
Sbjct: 12  PAFPSSSSSSFTNKALSLRPLPFPTSPLQRH 42


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