BLASTX nr result

ID: Coptis24_contig00015261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015261
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276482.1| PREDICTED: GTPase obg-like [Vitis vinifera]        57   2e-06
emb|CAN76164.1| hypothetical protein VITISV_022942 [Vitis vinifera]    57   2e-06

>ref|XP_002276482.1| PREDICTED: GTPase obg-like [Vitis vinifera]
          Length = 636

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 41/81 (50%), Positives = 50/81 (61%), Gaps = 14/81 (17%)
 Frame = +3

Query: 90  SRPGTRK--PKKLSKKPNP-------ILK---TKTISPNYGSG-GGEATTYTSLPPKDDF 230
           +RP TRK  PKKL + PNP       I K   T+T SPN     G +ATTYTSLPP++DF
Sbjct: 15  ARPTTRKANPKKLPRNPNPNPNPNPKIRKRTGTRTTSPNEVLPYGDQATTYTSLPPREDF 74

Query: 231 F-EPLELLNVSSSEVKLSDLA 290
           F   L     SS+E+KLSDL+
Sbjct: 75  FTTSLNSSFQSSTEIKLSDLS 95


>emb|CAN76164.1| hypothetical protein VITISV_022942 [Vitis vinifera]
          Length = 657

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 41/81 (50%), Positives = 50/81 (61%), Gaps = 14/81 (17%)
 Frame = +3

Query: 90  SRPGTRK--PKKLSKKPNP-------ILK---TKTISPNYGSG-GGEATTYTSLPPKDDF 230
           +RP TRK  PKKL + PNP       I K   T+T SPN     G +ATTYTSLPP++DF
Sbjct: 15  ARPTTRKANPKKLPRNPNPNPNPNPKIRKRTGTRTTSPNEVLPYGDQATTYTSLPPREDF 74

Query: 231 F-EPLELLNVSSSEVKLSDLA 290
           F   L     SS+E+KLSDL+
Sbjct: 75  FTTSLNSSFQSSTEIKLSDLS 95


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