BLASTX nr result

ID: Coptis24_contig00015259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015259
         (862 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281050.1| PREDICTED: UPF0496 protein At4g34320-like [V...   256   5e-66
ref|XP_003541076.1| PREDICTED: UPF0496 protein At4g34320-like [G...   249   7e-64
ref|XP_002313064.1| predicted protein [Populus trichocarpa] gi|2...   246   6e-63
ref|XP_003537895.1| PREDICTED: UPF0496 protein At4g34320-like [G...   244   2e-62
ref|XP_004148297.1| PREDICTED: UPF0496 protein At4g34320-like [C...   239   6e-61

>ref|XP_002281050.1| PREDICTED: UPF0496 protein At4g34320-like [Vitis vinifera]
          Length = 373

 Score =  256 bits (654), Expect = 5e-66
 Identities = 138/236 (58%), Positives = 160/236 (67%)
 Frame = -3

Query: 860 IIHVALQQFEDEDGVEGKKYLKTLEELKNFKDAGDPFTDEFFQILKAVYTQQVLMLEXXX 681
           +I VALQQFE+ED VEG +YL+TLEELK FK AGDPFT+EFFQI ++VY QQ+LMLE   
Sbjct: 138 LIVVALQQFEEEDEVEGSRYLRTLEELKKFKAAGDPFTEEFFQIFQSVYRQQMLMLEKLQ 197

Query: 680 XXXXXXXXXXXXXKTWRKVSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGS 501
                          WRKVS                                     +G+
Sbjct: 198 LRKSKLDKKLKYIHAWRKVSSMIFAATFAAVLICSVVAAAMAAPPVAAALAAAASLPLGT 257

Query: 500 MGKWFDSLWKNYEVALKGQKDIISSMQAGTYIAIKDLDTIRVLVDRLEIEIESLFNAADF 321
           MGKW DSL KNYE ALKGQK++ISSMQ GTY+AIKDLDTIRVL+DRLEIEIESL    D+
Sbjct: 258 MGKWIDSLLKNYENALKGQKEVISSMQVGTYVAIKDLDTIRVLIDRLEIEIESLLQTTDY 317

Query: 320 ALRGEEAVKFGIEEIKKKLGMFMQSIEDLGEHADKCSRDIRRARTVVLQRIIKPPN 153
            ++ EEAVKFGIEEIKKKLG+FM++++DLG  AD CSRDIRRARTVVLQRIIK PN
Sbjct: 318 VIK-EEAVKFGIEEIKKKLGVFMKNVDDLGVQADMCSRDIRRARTVVLQRIIKQPN 372


>ref|XP_003541076.1| PREDICTED: UPF0496 protein At4g34320-like [Glycine max]
          Length = 373

 Score =  249 bits (635), Expect = 7e-64
 Identities = 132/237 (55%), Positives = 157/237 (66%)
 Frame = -3

Query: 860 IIHVALQQFEDEDGVEGKKYLKTLEELKNFKDAGDPFTDEFFQILKAVYTQQVLMLEXXX 681
           +IHVA+QQFE+E G    +Y +TL+E KNFK AGDPFT+EFFQI ++VY  Q+LMLE   
Sbjct: 138 LIHVAVQQFEEESGSGDNRYARTLQEFKNFKAAGDPFTEEFFQIFQSVYKHQILMLEKLQ 197

Query: 680 XXXXXXXXXXXXXKTWRKVSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGS 501
                         +WRKVS                                     +GS
Sbjct: 198 LRKNKLDKKLKYIHSWRKVSSMIFVATFAAVLICSVVAAAIAAPPVAAAIAAATSIPIGS 257

Query: 500 MGKWFDSLWKNYEVALKGQKDIISSMQAGTYIAIKDLDTIRVLVDRLEIEIESLFNAADF 321
           MGKW DSLW+NYE ALKGQK++ISSMQAGTY+AIKDLD IR+L+DRLEIEIESL +  DF
Sbjct: 258 MGKWIDSLWRNYENALKGQKEVISSMQAGTYVAIKDLDNIRILIDRLEIEIESLLHNVDF 317

Query: 320 ALRGEEAVKFGIEEIKKKLGMFMQSIEDLGEHADKCSRDIRRARTVVLQRIIKPPNN 150
           A+  EEAVK  IEEIKKKLG+FM+++EDL   AD CSRDIRRARTVVLQRIIK P+N
Sbjct: 318 AIE-EEAVKVAIEEIKKKLGVFMKNVEDLAVQADMCSRDIRRARTVVLQRIIKHPHN 373


>ref|XP_002313064.1| predicted protein [Populus trichocarpa] gi|222849472|gb|EEE87019.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score =  246 bits (627), Expect = 6e-63
 Identities = 132/237 (55%), Positives = 155/237 (65%)
 Frame = -3

Query: 860 IIHVALQQFEDEDGVEGKKYLKTLEELKNFKDAGDPFTDEFFQILKAVYTQQVLMLEXXX 681
           +I VALQQFE+E    G KY+KTLEELK+FK AGDPFT+EFFQI ++VY QQ+ MLE   
Sbjct: 139 LILVALQQFEEESEAGGSKYVKTLEELKSFKAAGDPFTEEFFQIFQSVYRQQITMLEKLQ 198

Query: 680 XXXXXXXXXXXXXKTWRKVSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGS 501
                          WRKVS                                     +GS
Sbjct: 199 LRKNKLDKKLKCIHAWRKVSSIIFVATFATVLICSVVAAAMAAPPVAAALAAASSIPLGS 258

Query: 500 MGKWFDSLWKNYEVALKGQKDIISSMQAGTYIAIKDLDTIRVLVDRLEIEIESLFNAADF 321
           MGKW DS+WKNYE ALKGQK++IS+MQ GTY+AIKDLDTIRVL++RLEIEIE+L    DF
Sbjct: 259 MGKWIDSMWKNYENALKGQKEVISTMQVGTYVAIKDLDTIRVLINRLEIEIEALMQTTDF 318

Query: 320 ALRGEEAVKFGIEEIKKKLGMFMQSIEDLGEHADKCSRDIRRARTVVLQRIIKPPNN 150
           A+   +AVK  IEEIKKKLG+FM+++EDLG  AD CSRDIRRARTVVLQRIIK P N
Sbjct: 319 AIE-HDAVKLAIEEIKKKLGVFMKNVEDLGLQADTCSRDIRRARTVVLQRIIKNPQN 374


>ref|XP_003537895.1| PREDICTED: UPF0496 protein At4g34320-like [Glycine max]
          Length = 374

 Score =  244 bits (622), Expect = 2e-62
 Identities = 133/239 (55%), Positives = 156/239 (65%), Gaps = 2/239 (0%)
 Frame = -3

Query: 860 IIHVALQQFEDEDGVEG--KKYLKTLEELKNFKDAGDPFTDEFFQILKAVYTQQVLMLEX 687
           +IHVALQQFE+E    G   +Y +TL+E KNFK AGDPFT+EFFQI ++VY  Q+ MLE 
Sbjct: 137 LIHVALQQFEEESSGSGGDNRYPRTLQEFKNFKAAGDPFTEEFFQIFQSVYKHQIFMLEK 196

Query: 686 XXXXXXXXXXXXXXXKTWRKVSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV 507
                           +WRKVS                                     +
Sbjct: 197 LQLRKNKLDKKLKYIHSWRKVSSMIFVATFAAVLICSVVAAAIAAPPVAAAIAAATSIPI 256

Query: 506 GSMGKWFDSLWKNYEVALKGQKDIISSMQAGTYIAIKDLDTIRVLVDRLEIEIESLFNAA 327
           GSMGKW DSLW+NYE ALKGQK++ISSMQAGTY+AIKDLD IRVL+DRLEIEIESL +  
Sbjct: 257 GSMGKWIDSLWRNYENALKGQKEVISSMQAGTYVAIKDLDNIRVLIDRLEIEIESLLHNV 316

Query: 326 DFALRGEEAVKFGIEEIKKKLGMFMQSIEDLGEHADKCSRDIRRARTVVLQRIIKPPNN 150
           DFA+  EEAVK  IEEIKKKLG+FM+++EDL   AD CSRDIRRARTVVLQRIIK P+N
Sbjct: 317 DFAIE-EEAVKVAIEEIKKKLGVFMKNVEDLAVQADMCSRDIRRARTVVLQRIIKHPHN 374


>ref|XP_004148297.1| PREDICTED: UPF0496 protein At4g34320-like [Cucumis sativus]
           gi|449510317|ref|XP_004163630.1| PREDICTED: UPF0496
           protein At4g34320-like [Cucumis sativus]
          Length = 372

 Score =  239 bits (610), Expect = 6e-61
 Identities = 129/238 (54%), Positives = 156/238 (65%), Gaps = 1/238 (0%)
 Frame = -3

Query: 860 IIHVALQQFEDE-DGVEGKKYLKTLEELKNFKDAGDPFTDEFFQILKAVYTQQVLMLEXX 684
           +I +A+++FE+E   V+G  Y++TL+ELKNFK AGDPFT+EFFQI  AVY  Q+ MLE  
Sbjct: 136 LIVMAIERFEEEVKMVDGNGYVRTLQELKNFKAAGDPFTNEFFQIFNAVYRHQIGMLEKL 195

Query: 683 XXXXXXXXXXXXXXKTWRKVSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVG 504
                          TWRKVS                                     VG
Sbjct: 196 VIRKNKLDKKLKSMSTWRKVSSMIFIATFATVLICSIVAAAMAAPPVAAAMAAAASIPVG 255

Query: 503 SMGKWFDSLWKNYEVALKGQKDIISSMQAGTYIAIKDLDTIRVLVDRLEIEIESLFNAAD 324
           S+GKW DSLWKNYE ALKGQK+++SSMQ GTY+AIKD+D IRVL+D+L +EIESL   AD
Sbjct: 256 SVGKWIDSLWKNYEAALKGQKEVVSSMQVGTYLAIKDMDNIRVLIDKLTMEIESLLKKAD 315

Query: 323 FALRGEEAVKFGIEEIKKKLGMFMQSIEDLGEHADKCSRDIRRARTVVLQRIIKPPNN 150
           FA+  EEAVK G+EE+KKKLG FM+++EDLG  AD CSRDIRRARTVVLQRIIK PNN
Sbjct: 316 FAIE-EEAVKLGVEEMKKKLGQFMKNVEDLGVQADSCSRDIRRARTVVLQRIIKHPNN 372


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