BLASTX nr result

ID: Coptis24_contig00015244 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015244
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314877.1| predicted protein [Populus trichocarpa] gi|1...    52   1e-08
ref|XP_002332045.1| predicted protein [Populus trichocarpa] gi|2...    50   1e-07
ref|XP_003577085.1| PREDICTED: serine/threonine-protein phosphat...    50   2e-07
ref|XP_003577041.1| PREDICTED: serine/threonine-protein phosphat...    50   2e-07
gb|AEB40165.1| protein phosphatase 2A structural subunit [Tritic...    50   3e-07

>ref|XP_002314877.1| predicted protein [Populus trichocarpa] gi|118484366|gb|ABK94060.1|
           unknown [Populus trichocarpa]
           gi|222863917|gb|EEF01048.1| predicted protein [Populus
           trichocarpa]
          Length = 587

 Score = 52.0 bits (123), Expect(2) = 1e-08
 Identities = 26/33 (78%), Positives = 29/33 (87%)
 Frame = -3

Query: 449 NIKFKVAKVLQSLIRMVDQSVAKQMIHPCLVEL 351
           NIKF VAKVLQSLI +VDQSVA++ I PCLVEL
Sbjct: 529 NIKFNVAKVLQSLIPIVDQSVAEKTIRPCLVEL 561



 Score = 32.0 bits (71), Expect(2) = 1e-08
 Identities = 15/24 (62%), Positives = 20/24 (83%)
 Frame = -1

Query: 502 TCSKLLPIVINVSKYRV*ISNLRW 431
           TCSKLLP+V+N SK RV  SN+++
Sbjct: 511 TCSKLLPVVVNASKDRV--SNIKF 532


>ref|XP_002332045.1| predicted protein [Populus trichocarpa] gi|222875342|gb|EEF12473.1|
           predicted protein [Populus trichocarpa]
          Length = 587

 Score = 50.4 bits (119), Expect(2) = 1e-07
 Identities = 25/33 (75%), Positives = 28/33 (84%)
 Frame = -3

Query: 449 NIKFKVAKVLQSLIRMVDQSVAKQMIHPCLVEL 351
           NIKF VAKVLQSLI +VDQSV ++ I PCLVEL
Sbjct: 529 NIKFNVAKVLQSLIPIVDQSVVEKTIRPCLVEL 561



 Score = 30.4 bits (67), Expect(2) = 1e-07
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -1

Query: 502 TCSKLLPIVINVSKYRV 452
           TCS+LLPIVIN SK RV
Sbjct: 511 TCSQLLPIVINASKDRV 527


>ref|XP_003577085.1| PREDICTED: serine/threonine-protein phosphatase 2A 65 kDa
           regulatory subunit A beta isoform-like [Brachypodium
           distachyon]
          Length = 587

 Score = 50.4 bits (119), Expect(2) = 2e-07
 Identities = 23/33 (69%), Positives = 29/33 (87%)
 Frame = -3

Query: 449 NIKFKVAKVLQSLIRMVDQSVAKQMIHPCLVEL 351
           NIKF VAKVLQSL+ ++DQSVA++ + PCLVEL
Sbjct: 529 NIKFNVAKVLQSLVPIIDQSVAEKTVKPCLVEL 561



 Score = 29.6 bits (65), Expect(2) = 2e-07
 Identities = 14/17 (82%), Positives = 14/17 (82%)
 Frame = -1

Query: 502 TCSKLLPIVINVSKYRV 452
           TC KLLPIVIN SK RV
Sbjct: 511 TCQKLLPIVINSSKDRV 527


>ref|XP_003577041.1| PREDICTED: serine/threonine-protein phosphatase 2A 65 kDa
           regulatory subunit A beta isoform-like [Brachypodium
           distachyon]
          Length = 587

 Score = 50.4 bits (119), Expect(2) = 2e-07
 Identities = 23/33 (69%), Positives = 29/33 (87%)
 Frame = -3

Query: 449 NIKFKVAKVLQSLIRMVDQSVAKQMIHPCLVEL 351
           NIKF VAKVLQSL+ ++DQSVA++ + PCLVEL
Sbjct: 529 NIKFNVAKVLQSLVPIIDQSVAEKTVKPCLVEL 561



 Score = 29.3 bits (64), Expect(2) = 2e-07
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -1

Query: 502 TCSKLLPIVINVSKYRV 452
           TC KLLP+VIN SK RV
Sbjct: 511 TCQKLLPVVINSSKDRV 527


>gb|AEB40165.1| protein phosphatase 2A structural subunit [Triticum aestivum]
           gi|328775743|gb|AEB40166.1| protein phosphatase 2A
           structural subunit [Triticum aestivum]
           gi|328775745|gb|AEB40167.1| protein phosphatase 2A
           structural subunit [Triticum aestivum]
          Length = 587

 Score = 49.7 bits (117), Expect(2) = 3e-07
 Identities = 23/33 (69%), Positives = 29/33 (87%)
 Frame = -3

Query: 449 NIKFKVAKVLQSLIRMVDQSVAKQMIHPCLVEL 351
           NIKF VAKVLQSL+ ++DQSVA++ + PCLVEL
Sbjct: 529 NIKFNVAKVLQSLVPILDQSVAEKTVKPCLVEL 561



 Score = 29.3 bits (64), Expect(2) = 3e-07
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -1

Query: 502 TCSKLLPIVINVSKYRV 452
           TC KLLP+VIN SK RV
Sbjct: 511 TCQKLLPVVINSSKDRV 527


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