BLASTX nr result

ID: Coptis24_contig00015236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015236
         (886 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264307.2| PREDICTED: uncharacterized protein LOC100261...   171   3e-40
ref|XP_002309816.1| predicted protein [Populus trichocarpa] gi|2...   169   8e-40
ref|XP_004152108.1| PREDICTED: uncharacterized protein LOC101213...   166   7e-39
ref|XP_002327959.1| predicted protein [Populus trichocarpa] gi|2...   166   7e-39
ref|XP_002892311.1| hypothetical protein ARALYDRAFT_470598 [Arab...   166   9e-39

>ref|XP_002264307.2| PREDICTED: uncharacterized protein LOC100261066 isoform 1 [Vitis
           vinifera] gi|359478114|ref|XP_003632071.1| PREDICTED:
           uncharacterized protein LOC100261066 isoform 2 [Vitis
           vinifera]
          Length = 185

 Score =  171 bits (432), Expect = 3e-40
 Identities = 92/153 (60%), Positives = 102/153 (66%)
 Frame = +1

Query: 91  KKKKGQVFLEGYVVESVTEEEDQDXXXXXXXXXXXXXXRTVSLTDEDLDDLKGCVDLGFG 270
           +KKK QV LEGYV     E  D+D              RT SLTDEDLD+LKGC+DLGFG
Sbjct: 61  QKKKKQVLLEGYV-----ETADEDDLM-----------RTKSLTDEDLDELKGCLDLGFG 104

Query: 271 FSYDEIPELCNTLPALELCYSLSQRFLEDQNHLKXXXXXXXXXXXXXXXXXXXXXXVPIA 450
           FSY+EIPELCNTLPALELCYS+SQ+F++DQ                           PIA
Sbjct: 105 FSYEEIPELCNTLPALELCYSMSQKFMDDQQKAPESSPAASESPG------------PIA 152

Query: 451 NWKISSPGDHPEEVKARLKFWAQAVACTVKLCS 549
           NWKISSPGDHPEEVKARLKFWAQAVACTV+LCS
Sbjct: 153 NWKISSPGDHPEEVKARLKFWAQAVACTVRLCS 185


>ref|XP_002309816.1| predicted protein [Populus trichocarpa] gi|222852719|gb|EEE90266.1|
           predicted protein [Populus trichocarpa]
          Length = 198

 Score =  169 bits (428), Expect = 8e-40
 Identities = 90/153 (58%), Positives = 104/153 (67%)
 Frame = +1

Query: 91  KKKKGQVFLEGYVVESVTEEEDQDXXXXXXXXXXXXXXRTVSLTDEDLDDLKGCVDLGFG 270
           ++KK QV LEGYV  S +  ED+               RT SLTD+DLD+LKGC+DLGFG
Sbjct: 68  QRKKSQVLLEGYVEGSSSGSEDE-------------LKRTKSLTDDDLDELKGCLDLGFG 114

Query: 271 FSYDEIPELCNTLPALELCYSLSQRFLEDQNHLKXXXXXXXXXXXXXXXXXXXXXXVPIA 450
           FSYDEIPELCNTLPALELCYS+SQ+FL++  H K                       PIA
Sbjct: 115 FSYDEIPELCNTLPALELCYSMSQKFLDE--HQKSPEGSSPAVAEAANSS-------PIA 165

Query: 451 NWKISSPGDHPEEVKARLKFWAQAVACTVKLCS 549
           NWKISSPGDHPE+VKARLK+WAQAVACTV+LCS
Sbjct: 166 NWKISSPGDHPEDVKARLKYWAQAVACTVRLCS 198


>ref|XP_004152108.1| PREDICTED: uncharacterized protein LOC101213317 [Cucumis sativus]
           gi|449484637|ref|XP_004156937.1| PREDICTED:
           uncharacterized LOC101213317 [Cucumis sativus]
          Length = 183

 Score =  166 bits (420), Expect = 7e-39
 Identities = 90/152 (59%), Positives = 102/152 (67%)
 Frame = +1

Query: 94  KKKGQVFLEGYVVESVTEEEDQDXXXXXXXXXXXXXXRTVSLTDEDLDDLKGCVDLGFGF 273
           KK+ QV LEG+V       ED+D              RT SLTDEDLD+LKGCVDLGFGF
Sbjct: 55  KKRSQVLLEGFV-------EDEDDLM-----------RTKSLTDEDLDELKGCVDLGFGF 96

Query: 274 SYDEIPELCNTLPALELCYSLSQRFLEDQNHLKXXXXXXXXXXXXXXXXXXXXXXVPIAN 453
           SYDEIPELCNTLPALELCYS+SQ++++D  H K                       PIAN
Sbjct: 97  SYDEIPELCNTLPALELCYSMSQKYMDD--HQKSPESSPASAVPADSCSSVSS---PIAN 151

Query: 454 WKISSPGDHPEEVKARLKFWAQAVACTVKLCS 549
           WKISSPGDHPE+VKARLKFWAQAVACTV+LC+
Sbjct: 152 WKISSPGDHPEDVKARLKFWAQAVACTVRLCN 183


>ref|XP_002327959.1| predicted protein [Populus trichocarpa] gi|222837368|gb|EEE75747.1|
           predicted protein [Populus trichocarpa]
          Length = 151

 Score =  166 bits (420), Expect = 7e-39
 Identities = 90/152 (59%), Positives = 102/152 (67%)
 Frame = +1

Query: 94  KKKGQVFLEGYVVESVTEEEDQDXXXXXXXXXXXXXXRTVSLTDEDLDDLKGCVDLGFGF 273
           +KK QV LEGYV E  +  ED+               RT SLTD+DLD+LKGC+DLGFGF
Sbjct: 21  RKKSQVLLEGYV-EGRSNSEDE-------------LKRTKSLTDDDLDELKGCLDLGFGF 66

Query: 274 SYDEIPELCNTLPALELCYSLSQRFLEDQNHLKXXXXXXXXXXXXXXXXXXXXXXVPIAN 453
           SYDEIPELCNTLPALELCYS+SQ+FL++  H K                       PIAN
Sbjct: 67  SYDEIPELCNTLPALELCYSMSQKFLDE--HQKPPESSSPAEAEAEAASSS-----PIAN 119

Query: 454 WKISSPGDHPEEVKARLKFWAQAVACTVKLCS 549
           WKISSPGDHPE+VKARLKFWAQ VACTV+LCS
Sbjct: 120 WKISSPGDHPEDVKARLKFWAQTVACTVRLCS 151


>ref|XP_002892311.1| hypothetical protein ARALYDRAFT_470598 [Arabidopsis lyrata subsp.
           lyrata] gi|297338153|gb|EFH68570.1| hypothetical protein
           ARALYDRAFT_470598 [Arabidopsis lyrata subsp. lyrata]
          Length = 187

 Score =  166 bits (419), Expect = 9e-39
 Identities = 84/153 (54%), Positives = 104/153 (67%)
 Frame = +1

Query: 91  KKKKGQVFLEGYVVESVTEEEDQDXXXXXXXXXXXXXXRTVSLTDEDLDDLKGCVDLGFG 270
           ++KK QV LEGYV  +  +++  D              R+ SLTD+DL+DLKGC+DLGFG
Sbjct: 53  ERKKSQVLLEGYVETAAVDDQKDDLT------------RSKSLTDDDLEDLKGCLDLGFG 100

Query: 271 FSYDEIPELCNTLPALELCYSLSQRFLEDQNHLKXXXXXXXXXXXXXXXXXXXXXXVPIA 450
           FSYDEIPELCNTLPALELCYS+SQ+FL+D++                          PIA
Sbjct: 101 FSYDEIPELCNTLPALELCYSMSQKFLDDKH------KSPESSSVEDSPSPSPVTSTPIA 154

Query: 451 NWKISSPGDHPEEVKARLKFWAQAVACTVKLCS 549
           NWKISSPGD+P++VKARLK+WAQAVACTV+LCS
Sbjct: 155 NWKISSPGDNPDDVKARLKYWAQAVACTVQLCS 187


Top