BLASTX nr result

ID: Coptis24_contig00015230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015230
         (918 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315829.1| predicted protein [Populus trichocarpa] gi|2...   329   6e-88
ref|XP_002311563.1| predicted protein [Populus trichocarpa] gi|2...   319   6e-85
ref|XP_003530317.1| PREDICTED: uncharacterized protein At4g15970...   318   8e-85
ref|XP_002521882.1| pentatricopeptide repeat-containing protein,...   317   3e-84
ref|XP_003589671.1| hypothetical protein MTR_1g034810 [Medicago ...   315   9e-84

>ref|XP_002315829.1| predicted protein [Populus trichocarpa] gi|222864869|gb|EEF02000.1|
           predicted protein [Populus trichocarpa]
          Length = 404

 Score =  329 bits (843), Expect = 6e-88
 Identities = 142/176 (80%), Positives = 163/176 (92%)
 Frame = -2

Query: 917 DFLRSVLEMGYNFVFTDADVMWFRDPFPRFYLDADFQIACDHFMGNSFDLNNKPNGGFNY 738
           DFLR+VL+MGYNFVFTDAD+MWFRDPFPRFYLDADFQIACDHF+GNS D+ N+PNGGFNY
Sbjct: 208 DFLRAVLQMGYNFVFTDADIMWFRDPFPRFYLDADFQIACDHFLGNSSDIQNRPNGGFNY 267

Query: 737 VKSNNRTIAFYKYWYSSRETHPGYHDQDVLNMIKFDPFITEIGLTMRFLNTAYFGGLCEP 558
           VKSNNRTI FYK+WYSSRET+PGYHDQDVLN IKFDPFI ++GL MRFL+TA+FGGLCEP
Sbjct: 268 VKSNNRTIEFYKFWYSSRETYPGYHDQDVLNFIKFDPFIEDLGLKMRFLDTAFFGGLCEP 327

Query: 557 SKSLNQVCTMHANCCYGMDSKLHDLRIMLEDWRKFMTLPPSVKRASLSSWRIPQNC 390
           SK LN VCTMHANCCYG+DSKLHDLRIML+DW+ F++LPP++KR+S   W +PQNC
Sbjct: 328 SKDLNLVCTMHANCCYGLDSKLHDLRIMLQDWKTFLSLPPALKRSSSMLWTVPQNC 383


>ref|XP_002311563.1| predicted protein [Populus trichocarpa] gi|222851383|gb|EEE88930.1|
           predicted protein [Populus trichocarpa]
          Length = 277

 Score =  319 bits (817), Expect = 6e-85
 Identities = 138/176 (78%), Positives = 160/176 (90%)
 Frame = -2

Query: 917 DFLRSVLEMGYNFVFTDADVMWFRDPFPRFYLDADFQIACDHFMGNSFDLNNKPNGGFNY 738
           DFLRS+LEMGYNFVFTDAD+MWFRDPFPRF+LDADFQIACDHF GNS D+ N+PNGGFNY
Sbjct: 102 DFLRSLLEMGYNFVFTDADIMWFRDPFPRFFLDADFQIACDHFSGNSSDIQNRPNGGFNY 161

Query: 737 VKSNNRTIAFYKYWYSSRETHPGYHDQDVLNMIKFDPFITEIGLTMRFLNTAYFGGLCEP 558
           VKSN R+I FYK+WYSSRET+PG+HDQDVLN IKFDPFI  +GL MRFL+TA+FGGLCEP
Sbjct: 162 VKSNKRSIEFYKFWYSSRETYPGFHDQDVLNFIKFDPFIESLGLKMRFLDTAFFGGLCEP 221

Query: 557 SKSLNQVCTMHANCCYGMDSKLHDLRIMLEDWRKFMTLPPSVKRASLSSWRIPQNC 390
           SK LN VCTMHANCC+G+DSKLHDL IML+DW+ F++LPP++KR+   SWR+PQNC
Sbjct: 222 SKDLNLVCTMHANCCFGLDSKLHDLGIMLQDWKTFLSLPPTLKRSLSVSWRVPQNC 277


>ref|XP_003530317.1| PREDICTED: uncharacterized protein At4g15970-like [Glycine max]
          Length = 436

 Score =  318 bits (816), Expect = 8e-85
 Identities = 139/176 (78%), Positives = 161/176 (91%)
 Frame = -2

Query: 917 DFLRSVLEMGYNFVFTDADVMWFRDPFPRFYLDADFQIACDHFMGNSFDLNNKPNGGFNY 738
           DFLRSVLEMGYNFVFTDAD+MWFRDPFPRF+ DADFQIACDHF G+  D+ N+PNGGFN+
Sbjct: 214 DFLRSVLEMGYNFVFTDADIMWFRDPFPRFHRDADFQIACDHFTGSFDDVQNRPNGGFNF 273

Query: 737 VKSNNRTIAFYKYWYSSRETHPGYHDQDVLNMIKFDPFITEIGLTMRFLNTAYFGGLCEP 558
           VKSNNR+I FYK+WYSSRET+PGYHDQDVLN IK DPFIT++GL M+FL+TA FGGLCEP
Sbjct: 274 VKSNNRSIEFYKFWYSSRETYPGYHDQDVLNFIKVDPFITDLGLRMKFLDTANFGGLCEP 333

Query: 557 SKSLNQVCTMHANCCYGMDSKLHDLRIMLEDWRKFMTLPPSVKRASLSSWRIPQNC 390
           S+ LN+VCTMHANCCYGMDSKLHDLRIML+DW+ ++TL PS+KR S+ SWR+PQNC
Sbjct: 334 SRDLNKVCTMHANCCYGMDSKLHDLRIMLQDWKYYLTLSPSLKRLSIISWRVPQNC 389


>ref|XP_002521882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538920|gb|EEF40518.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 394

 Score =  317 bits (811), Expect = 3e-84
 Identities = 138/176 (78%), Positives = 162/176 (92%)
 Frame = -2

Query: 917 DFLRSVLEMGYNFVFTDADVMWFRDPFPRFYLDADFQIACDHFMGNSFDLNNKPNGGFNY 738
           DFLRSVLEMGYNFVFTDAD+MWFRDPFPRFY DADFQIACDHF G+S +++NKPNGGFNY
Sbjct: 200 DFLRSVLEMGYNFVFTDADIMWFRDPFPRFYSDADFQIACDHFTGSSINIHNKPNGGFNY 259

Query: 737 VKSNNRTIAFYKYWYSSRETHPGYHDQDVLNMIKFDPFITEIGLTMRFLNTAYFGGLCEP 558
           V+SNNR+I FYK+WYSSRET+PG HDQDVLN IK   FI ++GL MRFL+TA+FGGLCEP
Sbjct: 260 VRSNNRSIEFYKFWYSSRETYPGIHDQDVLNKIKNASFIEDLGLKMRFLDTAFFGGLCEP 319

Query: 557 SKSLNQVCTMHANCCYGMDSKLHDLRIMLEDWRKFMTLPPSVKRASLSSWRIPQNC 390
           SK LN VCTMHANCCYG++SKLHDLRIML+DW++F++LPPS+KR+S+ SWR+PQNC
Sbjct: 320 SKDLNLVCTMHANCCYGLESKLHDLRIMLQDWKRFLSLPPSLKRSSVVSWRVPQNC 375


>ref|XP_003589671.1| hypothetical protein MTR_1g034810 [Medicago truncatula]
           gi|355478719|gb|AES59922.1| hypothetical protein
           MTR_1g034810 [Medicago truncatula]
          Length = 306

 Score =  315 bits (807), Expect = 9e-84
 Identities = 136/176 (77%), Positives = 161/176 (91%)
 Frame = -2

Query: 917 DFLRSVLEMGYNFVFTDADVMWFRDPFPRFYLDADFQIACDHFMGNSFDLNNKPNGGFNY 738
           DFLRSVLE+GYNFVFTDAD+MWFRDPFPRFY DADFQIACDHF G   D++N+PNGGFN+
Sbjct: 110 DFLRSVLELGYNFVFTDADIMWFRDPFPRFYDDADFQIACDHFTGFFDDVHNRPNGGFNF 169

Query: 737 VKSNNRTIAFYKYWYSSRETHPGYHDQDVLNMIKFDPFITEIGLTMRFLNTAYFGGLCEP 558
           V+SNNR+I FYK+WYSS++T+PGYHDQDVLN IK DP+I +IGL M+FL+TAYFGGLCEP
Sbjct: 170 VRSNNRSIEFYKFWYSSQDTYPGYHDQDVLNFIKVDPYIFDIGLKMKFLDTAYFGGLCEP 229

Query: 557 SKSLNQVCTMHANCCYGMDSKLHDLRIMLEDWRKFMTLPPSVKRASLSSWRIPQNC 390
           S+ LNQVCTMHANCCYGMD+KLHDL+IML+DWR ++TLPPS+KR S+ SWR+PQ C
Sbjct: 230 SRDLNQVCTMHANCCYGMDNKLHDLKIMLQDWRYYLTLPPSLKRLSIISWRVPQKC 285


Top