BLASTX nr result

ID: Coptis24_contig00015227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015227
         (786 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634566.1| PREDICTED: protein phosphatase 1 regulatory ...    80   5e-13
ref|XP_002516330.1| expressed protein, putative [Ricinus communi...    74   5e-11
gb|AFK37358.1| unknown [Lotus japonicus]                               72   1e-10
gb|ABK26998.1| unknown [Picea sitchensis]                              70   4e-10
ref|NP_001236996.1| uncharacterized protein LOC100527761 [Glycin...    69   1e-09

>ref|XP_003634566.1| PREDICTED: protein phosphatase 1 regulatory subunit 11-like [Vitis
           vinifera]
          Length = 124

 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 49/79 (62%), Positives = 51/79 (64%), Gaps = 6/79 (7%)
 Frame = +1

Query: 172 RKMVRPMSSRPVGSSATTTLTLENPSPXXXXXXX------TLVLHLSHPPSTKKKVTWKE 333
           R   RP SS    S+ TTTLTLENPSP             TLVL L+     KKKVTWKE
Sbjct: 8   RTRPRPPSS---SSTITTTLTLENPSPSQPQQPQQQQQQTTLVLRLN----PKKKVTWKE 60

Query: 334 GTVDNEFLQRKSSKKCCIF 390
           GTVDNEFLQRKSSKKCCIF
Sbjct: 61  GTVDNEFLQRKSSKKCCIF 79


>ref|XP_002516330.1| expressed protein, putative [Ricinus communis]
           gi|223544560|gb|EEF46077.1| expressed protein, putative
           [Ricinus communis]
          Length = 124

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 38/70 (54%), Positives = 48/70 (68%)
 Frame = +1

Query: 181 VRPMSSRPVGSSATTTLTLENPSPXXXXXXXTLVLHLSHPPSTKKKVTWKEGTVDNEFLQ 360
           +RP+S+ P   + T T+T+EN +        TLVL L      +KKVTWKEGTVDNEF+Q
Sbjct: 15  IRPLST-PSAGTVTATVTVENNNRQQQQPPQTLVLRLKRK---EKKVTWKEGTVDNEFMQ 70

Query: 361 RKSSKKCCIF 390
           +KSSKKCCIF
Sbjct: 71  KKSSKKCCIF 80


>gb|AFK37358.1| unknown [Lotus japonicus]
          Length = 124

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 47/123 (38%), Positives = 57/123 (46%), Gaps = 7/123 (5%)
 Frame = +1

Query: 172 RKMVRPMSSRPVGSSATTTLTLENP------SPXXXXXXXTLVLHLSHPPSTKKKVTWKE 333
           R   RP++  P   +ATTT+T++N       S         L L L      KKKV+WKE
Sbjct: 5   RNSTRPVALSPPSITATTTITIQNSDASSSSSQHEQQQPEVLYLPLDRK---KKKVSWKE 61

Query: 334 GTVDNEFLQRKSSKKCCIFXXXXXXXXXXXXXXXXXXXXGQSKSHANGSGG-CCSKDSEV 510
           GTVDNEF+Q+KSSKKCCIF                         H +G GG CC    E 
Sbjct: 62  GTVDNEFMQKKSSKKCCIF-HKEKPFDEDDSDEDDIPHHSDHHPHDHGDGGFCCKNHDEA 120

Query: 511 GTS 519
           G S
Sbjct: 121 GPS 123


>gb|ABK26998.1| unknown [Picea sitchensis]
          Length = 116

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 36/67 (53%), Positives = 45/67 (67%)
 Frame = +1

Query: 190 MSSRPVGSSATTTLTLENPSPXXXXXXXTLVLHLSHPPSTKKKVTWKEGTVDNEFLQRKS 369
           M++   GSS+TTT+T+E   P         VL L   P  KKKVTWKEGTV+NEF+ +KS
Sbjct: 4   MAAVGTGSSSTTTITVEEGPPQQ-------VLKLRLVPRRKKKVTWKEGTVNNEFMNKKS 56

Query: 370 SKKCCIF 390
           SKKCC+F
Sbjct: 57  SKKCCVF 63


>ref|NP_001236996.1| uncharacterized protein LOC100527761 [Glycine max]
           gi|255633132|gb|ACU16921.1| unknown [Glycine max]
          Length = 121

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 44/116 (37%), Positives = 55/116 (47%), Gaps = 6/116 (5%)
 Frame = +1

Query: 190 MSSRPVGSSATTTLTLENPSPXXXXXXX------TLVLHLSHPPSTKKKVTWKEGTVDNE 351
           +SS  + ++ TTT+T+ N  P              L L L+     KKKV+WKEGTVDNE
Sbjct: 13  LSSPSITATTTTTITILNSEPSSSSSQQEQQQPEVLFLPLNRK---KKKVSWKEGTVDNE 69

Query: 352 FLQRKSSKKCCIFXXXXXXXXXXXXXXXXXXXXGQSKSHANGSGGCCSKDSEVGTS 519
           F+Q+KSSKKCCIF                      S  H + SG CC    E G S
Sbjct: 70  FMQKKSSKKCCIFHKQKPFDEDDSDEDEH-----HSDEHPHDSGFCCKNYDEAGPS 120


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