BLASTX nr result

ID: Coptis24_contig00015217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015217
         (1104 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532361.1| Ethylene-responsive transcription factor 1A,...   196   7e-48
ref|XP_002304302.1| AP2/ERF domain-containing transcription fact...   194   3e-47
gb|AEQ64867.1| ethylene response factor 11 [Medicago sativa]          194   4e-47
ref|XP_003608658.1| Ethylene-responsive transcription factor 1A ...   194   4e-47
gb|ACM49849.1| ethylene responsive transcription factor 1a [Prun...   192   1e-46

>ref|XP_002532361.1| Ethylene-responsive transcription factor 1A, putative [Ricinus
            communis] gi|223527948|gb|EEF30034.1| Ethylene-responsive
            transcription factor 1A, putative [Ricinus communis]
          Length = 284

 Score =  196 bits (499), Expect = 7e-48
 Identities = 115/233 (49%), Positives = 140/233 (60%), Gaps = 11/233 (4%)
 Frame = -3

Query: 1003 NSDFGFLDSVRRHLLEESEA---STTMNFYSNAP--------PVYCRSSSFSSLFPCLTE 857
            +S++  ++SVRRHLLE  E+   S + N  +  P        PVYCRSSSFSSL+PCL+E
Sbjct: 9    DSNYAAIESVRRHLLEGGESIMSSFSSNISNTTPAVATTGPKPVYCRSSSFSSLYPCLSE 68

Query: 856  KWGDLPMKVDDSEDMLLYGVLRDAVNDGWIPSLAPHQQPYSPNSPLDSNLTVTNIVNVKS 677
             WGDLP+K DD EDMLLYGVLRDA+  GW+P       P   + PLD N  ++++     
Sbjct: 69   NWGDLPLKADDYEDMLLYGVLRDALTVGWVPQ---DNFPLVKSEPLD-NFPLSSLPLPPP 124

Query: 676  EPIERFQEPAILSTSTGTMSIAGSNLARLXXXXXXXXXXXXXXXKGKHYRGVRQRPWGKF 497
             P E F  P ++ T+  +  +A   +A+                 GKHYRGVRQRPWGKF
Sbjct: 125  MPEEIFTPPPVV-TAQPSPPVASPAVAK-----------------GKHYRGVRQRPWGKF 166

Query: 496  AAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFPLRAGMDE 338
            AAEIRDPAKNGARVWLGTFET             RMRGSRALLNFPLR    E
Sbjct: 167  AAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNNGE 219


>ref|XP_002304302.1| AP2/ERF domain-containing transcription factor [Populus trichocarpa]
            gi|222841734|gb|EEE79281.1| AP2/ERF domain-containing
            transcription factor [Populus trichocarpa]
          Length = 280

 Score =  194 bits (494), Expect = 3e-47
 Identities = 123/243 (50%), Positives = 136/243 (55%), Gaps = 16/243 (6%)
 Frame = -3

Query: 1018 QNMNCNSDFGFLDSVRRHLLEE--SEASTTMNFYSNA--------------PPVYCRSSS 887
            Q++    D+ FLD VR HL  E  S A TT   Y+ A              P VYCRS+S
Sbjct: 4    QSLLDQPDYAFLDPVRLHLQGETVSTAPTTTCSYTPAITTTTAAPAANYTPPLVYCRSTS 63

Query: 886  FSSLFPCLTEKWGDLPMKVDDSEDMLLYGVLRDAVNDGWIPSLAPHQQPYSPNSPLDSNL 707
            FSSL+PCLTE WGDLP+KVDDSEDM LY VLRDAV  GW+PSL   Q    PN PL    
Sbjct: 64   FSSLYPCLTENWGDLPLKVDDSEDMFLYAVLRDAVTVGWVPSLKTDQL-VQPNFPL---- 118

Query: 706  TVTNIVNVKSEPIERFQEPAILSTSTGTMSIAGSNLARLXXXXXXXXXXXXXXXKGKHYR 527
                   VK EP E       L+ S  + ++  +  A L                GKHYR
Sbjct: 119  -------VKLEPTEN------LAVSPPSTAVPVAEPAVLPSK-------------GKHYR 152

Query: 526  GVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFPLRAG 347
            GVRQRPWGKFAAEIRDPAKNGARVWLGTFET             RMRGSRALLNFPLR  
Sbjct: 153  GVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVN 212

Query: 346  MDE 338
              E
Sbjct: 213  SGE 215


>gb|AEQ64867.1| ethylene response factor 11 [Medicago sativa]
          Length = 268

 Score =  194 bits (492), Expect = 4e-47
 Identities = 120/230 (52%), Positives = 135/230 (58%), Gaps = 4/230 (1%)
 Frame = -3

Query: 1015 NMNCNSDFGFLDSVRRHLLEESE----ASTTMNFYSNAPPVYCRSSSFSSLFPCLTEKWG 848
            N N +SD   LDS+RRHLL ESE    A T +   S    V+ RSSSFSSL+PCL++ WG
Sbjct: 4    NSNFDSDLALLDSIRRHLLGESEFIFGAPTNV---SGNTRVFSRSSSFSSLYPCLSDNWG 60

Query: 847  DLPMKVDDSEDMLLYGVLRDAVNDGWIPSLAPHQQPYSPNSPLDSNLTVTNIVNVKSEPI 668
            +LP+K DDSEDM+LYGVLRDAVN GW+PSL     P S +S     +TV      K EP 
Sbjct: 61   ELPLKEDDSEDMVLYGVLRDAVNVGWVPSLEVGS-PESVSSVFPLEMTV------KPEPD 113

Query: 667  ERFQEPAILSTSTGTMSIAGSNLARLXXXXXXXXXXXXXXXKGKHYRGVRQRPWGKFAAE 488
                E  +   ST    +     A                 KGKHYRGVRQRPWGKFAAE
Sbjct: 114  VMPVENVLPVASTAEQVVPEGPKAA--------------PVKGKHYRGVRQRPWGKFAAE 159

Query: 487  IRDPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFPLRAGMDE 338
            IRDPAKNGARVWLGTFET             RMRGSRALLNFPLR    E
Sbjct: 160  IRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGE 209


>ref|XP_003608658.1| Ethylene-responsive transcription factor 1A [Medicago truncatula]
            gi|133872332|gb|ABO40237.1| ethylene-responsive
            transcription factor 1A [Medicago truncatula]
            gi|355509713|gb|AES90855.1| Ethylene-responsive
            transcription factor 1A [Medicago truncatula]
          Length = 268

 Score =  194 bits (492), Expect = 4e-47
 Identities = 120/230 (52%), Positives = 135/230 (58%), Gaps = 4/230 (1%)
 Frame = -3

Query: 1015 NMNCNSDFGFLDSVRRHLLEESE----ASTTMNFYSNAPPVYCRSSSFSSLFPCLTEKWG 848
            N N +SD   LDS+RRHLL ESE    A T +   S    V+ RSSSFSSL+PCL++ WG
Sbjct: 4    NSNFDSDLALLDSIRRHLLGESEFIFGAPTNV---SGNTRVFSRSSSFSSLYPCLSDNWG 60

Query: 847  DLPMKVDDSEDMLLYGVLRDAVNDGWIPSLAPHQQPYSPNSPLDSNLTVTNIVNVKSEPI 668
            +LP+K DDSEDM+LYGVLRDAVN GW+PSL     P S +S     +TV      K EP 
Sbjct: 61   ELPLKEDDSEDMVLYGVLRDAVNVGWVPSLEVGS-PESVSSVFPLEMTV------KPEPD 113

Query: 667  ERFQEPAILSTSTGTMSIAGSNLARLXXXXXXXXXXXXXXXKGKHYRGVRQRPWGKFAAE 488
                E  +   ST    +     A                 KGKHYRGVRQRPWGKFAAE
Sbjct: 114  VMPVENVLPVASTAEQVVPEGPKAA--------------PVKGKHYRGVRQRPWGKFAAE 159

Query: 487  IRDPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFPLRAGMDE 338
            IRDPAKNGARVWLGTFET             RMRGSRALLNFPLR    E
Sbjct: 160  IRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGE 209


>gb|ACM49849.1| ethylene responsive transcription factor 1a [Prunus salicina]
          Length = 282

 Score =  192 bits (488), Expect = 1e-46
 Identities = 110/228 (48%), Positives = 132/228 (57%), Gaps = 6/228 (2%)
 Frame = -3

Query: 1003 NSDFGFLDSVRRHLLEESEASTTMNFYSNAP-PVYCRSSSFSSLFPCLTEKWGDLPMKVD 827
            ++D   LDS+RRHLL E++     +  ++   P++ RSSSFSSL+PCLTE WGDLP+K D
Sbjct: 8    DADITLLDSIRRHLLGETDLRIGNSMANSVTGPIFSRSSSFSSLYPCLTENWGDLPLKED 67

Query: 826  DSEDMLLYGVLRDAVNDGWIPSLAPHQQP-----YSPNSPLDSNLTVTNIVNVKSEPIER 662
            DSEDM+LYGVLRDAVN GW+PSL           +S  S  +    V+ +   K  P++ 
Sbjct: 68   DSEDMVLYGVLRDAVNVGWVPSLGSGSADTCSLNFSVKSEPEVLTPVSEVPEKKPSPVQP 127

Query: 661  FQEPAILSTSTGTMSIAGSNLARLXXXXXXXXXXXXXXXKGKHYRGVRQRPWGKFAAEIR 482
             + PA      G   +                        GKHYRGVRQRPWGKFAAEIR
Sbjct: 128  VR-PAKQPAQAGPAVVPAK---------------------GKHYRGVRQRPWGKFAAEIR 165

Query: 481  DPAKNGARVWLGTFETXXXXXXXXXXXXXRMRGSRALLNFPLRAGMDE 338
            DPAKNGARVWLGTFET             RMRGSRALLNFPLR    E
Sbjct: 166  DPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGE 213


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