BLASTX nr result

ID: Coptis24_contig00015214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015214
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518847.1| n-rich protein, putative [Ricinus communis] ...    75   1e-11
ref|XP_002304564.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
gb|ABK95892.1| unknown [Populus trichocarpa]                           72   6e-11
ref|XP_004148988.1| PREDICTED: uncharacterized protein LOC101208...    68   1e-09
ref|XP_002266388.1| PREDICTED: uncharacterized protein LOC100252...    61   2e-07

>ref|XP_002518847.1| n-rich protein, putative [Ricinus communis]
           gi|223541834|gb|EEF43380.1| n-rich protein, putative
           [Ricinus communis]
          Length = 396

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 35/65 (53%), Positives = 44/65 (67%)
 Frame = +1

Query: 109 LRVQNTNFGNLSINDGIWGSSLTSKKNEERRNFDVRVGGERVSGGTQNLQPSKGTNFNGF 288
           LRVQ +N  NLS+ND IW +S  SK+ +ERRNFD+RVGGE V+         KG++ NG 
Sbjct: 15  LRVQTSNLANLSLNDSIWSNSYGSKRPDERRNFDIRVGGE-VNNSAPTATKLKGSDLNGL 73

Query: 289 NDGWK 303
           ND WK
Sbjct: 74  NDDWK 78


>ref|XP_002304564.1| predicted protein [Populus trichocarpa] gi|222841996|gb|EEE79543.1|
           predicted protein [Populus trichocarpa]
          Length = 364

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 35/64 (54%), Positives = 44/64 (68%)
 Frame = +1

Query: 109 LRVQNTNFGNLSINDGIWGSSLTSKKNEERRNFDVRVGGERVSGGTQNLQPSKGTNFNGF 288
           LRVQ  N GNLS+ND IW +S  SK+ ++RRNFD+RVG E       NL+  KG++ N F
Sbjct: 15  LRVQTPNLGNLSLNDSIWSNSFGSKRPDQRRNFDIRVGAE-----VNNLK-QKGSDLNSF 68

Query: 289 NDGW 300
           NDGW
Sbjct: 69  NDGW 72


>gb|ABK95892.1| unknown [Populus trichocarpa]
          Length = 390

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 35/64 (54%), Positives = 44/64 (68%)
 Frame = +1

Query: 109 LRVQNTNFGNLSINDGIWGSSLTSKKNEERRNFDVRVGGERVSGGTQNLQPSKGTNFNGF 288
           LRVQ  N GNLS+ND IW +S  SK+ ++RRNFD+RVG E       NL+  KG++ N F
Sbjct: 15  LRVQTPNLGNLSLNDSIWSNSFGSKRPDQRRNFDIRVGAE-----VNNLK-QKGSDLNSF 68

Query: 289 NDGW 300
           NDGW
Sbjct: 69  NDGW 72


>ref|XP_004148988.1| PREDICTED: uncharacterized protein LOC101208173 [Cucumis sativus]
           gi|449506207|ref|XP_004162682.1| PREDICTED:
           uncharacterized LOC101208173 [Cucumis sativus]
          Length = 371

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 35/67 (52%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
 Frame = +1

Query: 109 LRVQNTNFGNLSINDGIWGSSLTSKKNEERRNFDVRVGGERVSGGTQNLQPS-KGTNFNG 285
           LRVQ  N  NLS+ND IW +S  SK+ EERRNFDVR GGE       N +P    ++ N 
Sbjct: 15  LRVQTGNLANLSLNDSIWSNSYVSKRPEERRNFDVRNGGE--VNSLNNFKPKVSDSDVNR 72

Query: 286 FNDGWKN 306
           FNDGW +
Sbjct: 73  FNDGWNS 79


>ref|XP_002266388.1| PREDICTED: uncharacterized protein LOC100252953 [Vitis vinifera]
          Length = 389

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 32/62 (51%), Positives = 41/62 (66%)
 Frame = +1

Query: 109 LRVQNTNFGNLSINDGIWGSSLTSKKNEERRNFDVRVGGERVSGGTQNLQPSKGTNFNGF 288
           LRVQ +N  NLS+N+ IW S  T K+ +ERRNFD+RVGGE  +G +      KG +FNG 
Sbjct: 15  LRVQTSNLANLSLNESIWSSPYT-KRQDERRNFDIRVGGEINTGSSLK---QKGLDFNGG 70

Query: 289 ND 294
            D
Sbjct: 71  YD 72


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