BLASTX nr result
ID: Coptis24_contig00015214
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00015214 (604 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002518847.1| n-rich protein, putative [Ricinus communis] ... 75 1e-11 ref|XP_002304564.1| predicted protein [Populus trichocarpa] gi|2... 72 6e-11 gb|ABK95892.1| unknown [Populus trichocarpa] 72 6e-11 ref|XP_004148988.1| PREDICTED: uncharacterized protein LOC101208... 68 1e-09 ref|XP_002266388.1| PREDICTED: uncharacterized protein LOC100252... 61 2e-07 >ref|XP_002518847.1| n-rich protein, putative [Ricinus communis] gi|223541834|gb|EEF43380.1| n-rich protein, putative [Ricinus communis] Length = 396 Score = 74.7 bits (182), Expect = 1e-11 Identities = 35/65 (53%), Positives = 44/65 (67%) Frame = +1 Query: 109 LRVQNTNFGNLSINDGIWGSSLTSKKNEERRNFDVRVGGERVSGGTQNLQPSKGTNFNGF 288 LRVQ +N NLS+ND IW +S SK+ +ERRNFD+RVGGE V+ KG++ NG Sbjct: 15 LRVQTSNLANLSLNDSIWSNSYGSKRPDERRNFDIRVGGE-VNNSAPTATKLKGSDLNGL 73 Query: 289 NDGWK 303 ND WK Sbjct: 74 NDDWK 78 >ref|XP_002304564.1| predicted protein [Populus trichocarpa] gi|222841996|gb|EEE79543.1| predicted protein [Populus trichocarpa] Length = 364 Score = 72.4 bits (176), Expect = 6e-11 Identities = 35/64 (54%), Positives = 44/64 (68%) Frame = +1 Query: 109 LRVQNTNFGNLSINDGIWGSSLTSKKNEERRNFDVRVGGERVSGGTQNLQPSKGTNFNGF 288 LRVQ N GNLS+ND IW +S SK+ ++RRNFD+RVG E NL+ KG++ N F Sbjct: 15 LRVQTPNLGNLSLNDSIWSNSFGSKRPDQRRNFDIRVGAE-----VNNLK-QKGSDLNSF 68 Query: 289 NDGW 300 NDGW Sbjct: 69 NDGW 72 >gb|ABK95892.1| unknown [Populus trichocarpa] Length = 390 Score = 72.4 bits (176), Expect = 6e-11 Identities = 35/64 (54%), Positives = 44/64 (68%) Frame = +1 Query: 109 LRVQNTNFGNLSINDGIWGSSLTSKKNEERRNFDVRVGGERVSGGTQNLQPSKGTNFNGF 288 LRVQ N GNLS+ND IW +S SK+ ++RRNFD+RVG E NL+ KG++ N F Sbjct: 15 LRVQTPNLGNLSLNDSIWSNSFGSKRPDQRRNFDIRVGAE-----VNNLK-QKGSDLNSF 68 Query: 289 NDGW 300 NDGW Sbjct: 69 NDGW 72 >ref|XP_004148988.1| PREDICTED: uncharacterized protein LOC101208173 [Cucumis sativus] gi|449506207|ref|XP_004162682.1| PREDICTED: uncharacterized LOC101208173 [Cucumis sativus] Length = 371 Score = 68.2 bits (165), Expect = 1e-09 Identities = 35/67 (52%), Positives = 42/67 (62%), Gaps = 1/67 (1%) Frame = +1 Query: 109 LRVQNTNFGNLSINDGIWGSSLTSKKNEERRNFDVRVGGERVSGGTQNLQPS-KGTNFNG 285 LRVQ N NLS+ND IW +S SK+ EERRNFDVR GGE N +P ++ N Sbjct: 15 LRVQTGNLANLSLNDSIWSNSYVSKRPEERRNFDVRNGGE--VNSLNNFKPKVSDSDVNR 72 Query: 286 FNDGWKN 306 FNDGW + Sbjct: 73 FNDGWNS 79 >ref|XP_002266388.1| PREDICTED: uncharacterized protein LOC100252953 [Vitis vinifera] Length = 389 Score = 60.8 bits (146), Expect = 2e-07 Identities = 32/62 (51%), Positives = 41/62 (66%) Frame = +1 Query: 109 LRVQNTNFGNLSINDGIWGSSLTSKKNEERRNFDVRVGGERVSGGTQNLQPSKGTNFNGF 288 LRVQ +N NLS+N+ IW S T K+ +ERRNFD+RVGGE +G + KG +FNG Sbjct: 15 LRVQTSNLANLSLNESIWSSPYT-KRQDERRNFDIRVGGEINTGSSLK---QKGLDFNGG 70 Query: 289 ND 294 D Sbjct: 71 YD 72