BLASTX nr result
ID: Coptis24_contig00015200
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00015200 (264 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containi... 118 6e-25 ref|XP_002465885.1| hypothetical protein SORBIDRAFT_01g047580 [S... 117 1e-24 gb|AFW59818.1| hypothetical protein ZEAMMB73_731783 [Zea mays] 116 2e-24 ref|NP_001147836.1| vegetative storage protein [Zea mays] gi|195... 108 6e-22 tpg|DAA43298.1| TPA: vegetative storage protein [Zea mays] 107 8e-22 >ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170 [Vitis vinifera] Length = 590 Score = 118 bits (295), Expect = 6e-25 Identities = 57/87 (65%), Positives = 66/87 (75%) Frame = +2 Query: 2 WNAIMAAYAQQGDVNSAIELFDGMKQRGFVADELSFLAILTACRNAGLVVEAEKWLNCMI 181 WNA+MA YAQQGD S +ELF+ M+ RG V DE SFLAILT+ NAGLV EAE WL M Sbjct: 282 WNAMMAGYAQQGDQRSVVELFNSMEARGLVPDEYSFLAILTSLYNAGLVGEAEGWLTRMK 341 Query: 182 SDYEVEPGLEHYTCVVGALARAGRLRD 262 DY +EPGLEHYTC+VG + RAG+L D Sbjct: 342 VDYGLEPGLEHYTCLVGTMGRAGQLED 368 >ref|XP_002465885.1| hypothetical protein SORBIDRAFT_01g047580 [Sorghum bicolor] gi|241919739|gb|EER92883.1| hypothetical protein SORBIDRAFT_01g047580 [Sorghum bicolor] Length = 620 Score = 117 bits (293), Expect = 1e-24 Identities = 55/87 (63%), Positives = 66/87 (75%) Frame = +2 Query: 2 WNAIMAAYAQQGDVNSAIELFDGMKQRGFVADELSFLAILTACRNAGLVVEAEKWLNCMI 181 WNA+++A+AQQGDV + I LF+ M + GF D L+FLA+LTAC NAG EAE WL M Sbjct: 271 WNAVLSAHAQQGDVQAVIGLFNQMMELGFAPDGLTFLAVLTACSNAGAATEAEFWLEAMQ 330 Query: 182 SDYEVEPGLEHYTCVVGALARAGRLRD 262 S Y V+PGLEHYTCVVGA+AR GRL D Sbjct: 331 SKYSVKPGLEHYTCVVGAMARVGRLVD 357 >gb|AFW59818.1| hypothetical protein ZEAMMB73_731783 [Zea mays] Length = 572 Score = 116 bits (290), Expect = 2e-24 Identities = 54/87 (62%), Positives = 65/87 (74%) Frame = +2 Query: 2 WNAIMAAYAQQGDVNSAIELFDGMKQRGFVADELSFLAILTACRNAGLVVEAEKWLNCMI 181 WN +++A+AQQGDV + I LF+ M + GF D L+FLA+LTAC NAG EAE WL M Sbjct: 280 WNTVLSAHAQQGDVQAVIGLFNQMMELGFAPDGLTFLAVLTACSNAGAATEAEFWLETMQ 339 Query: 182 SDYEVEPGLEHYTCVVGALARAGRLRD 262 S Y V+PGLEHYTCVVGA+AR GRL D Sbjct: 340 SKYSVKPGLEHYTCVVGAMARMGRLED 366 >ref|NP_001147836.1| vegetative storage protein [Zea mays] gi|195614038|gb|ACG28849.1| vegetative storage protein [Zea mays] Length = 563 Score = 108 bits (269), Expect = 6e-22 Identities = 50/87 (57%), Positives = 62/87 (71%) Frame = +2 Query: 2 WNAIMAAYAQQGDVNSAIELFDGMKQRGFVADELSFLAILTACRNAGLVVEAEKWLNCMI 181 WNA+++A+AQQGDV LF+ M + GF D L+FLA+LT+C NAG EA+ WL M Sbjct: 271 WNAVLSAHAQQGDVQEVTGLFNQMMELGFAPDGLTFLAVLTSCSNAGAATEAKFWLEAMQ 330 Query: 182 SDYEVEPGLEHYTCVVGALARAGRLRD 262 S Y V+P LEHYTCVVGA+AR G L D Sbjct: 331 SKYGVKPDLEHYTCVVGAMARVGHLED 357 >tpg|DAA43298.1| TPA: vegetative storage protein [Zea mays] Length = 563 Score = 107 bits (268), Expect = 8e-22 Identities = 50/87 (57%), Positives = 62/87 (71%) Frame = +2 Query: 2 WNAIMAAYAQQGDVNSAIELFDGMKQRGFVADELSFLAILTACRNAGLVVEAEKWLNCMI 181 WNA+++A+AQQGDV LF+ M + GF D L+FLA+LT+C NAG EA+ WL M Sbjct: 271 WNAVLSAHAQQGDVQEVTGLFNQMMKLGFAPDGLTFLAVLTSCSNAGAATEAKFWLEAMQ 330 Query: 182 SDYEVEPGLEHYTCVVGALARAGRLRD 262 S Y V+P LEHYTCVVGA+AR G L D Sbjct: 331 SKYGVKPDLEHYTCVVGAMARVGHLED 357