BLASTX nr result

ID: Coptis24_contig00015179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015179
         (1746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27739.3| unnamed protein product [Vitis vinifera]              407   e-111
ref|XP_002277240.1| PREDICTED: uncharacterized protein LOC100261...   405   e-110
gb|AEJ07951.1| Tac7077 [Sorghum propinquum]                           368   2e-99
ref|XP_002516184.1| conserved hypothetical protein [Ricinus comm...   367   4e-99
ref|NP_001151136.1| tac7077 [Zea mays] gi|195644522|gb|ACG41729....   367   4e-99

>emb|CBI27739.3| unnamed protein product [Vitis vinifera]
          Length = 364

 Score =  407 bits (1045), Expect = e-111
 Identities = 224/366 (61%), Positives = 260/366 (71%), Gaps = 9/366 (2%)
 Frame = -1

Query: 1299 VVVMILKRQTLR-LFFSQQFAHLDKKTSLSNLGVMALLFKDPLI---ASFNTFSRINGS- 1135
            V ++++KRQ++R LF ++ F           L VMA L +   +   A+FN      G  
Sbjct: 12   VRIVMIKRQSVRFLFLARIFGKHPHHHHRHRLVVMASLLQHHGLLHTATFNDRLPFMGKI 71

Query: 1134 ----NQSRFPQNVKVDAGNDFRINASGEFNLRGCSEHFDEFQRRGDNNKFQKSHAMAMYP 967
                N     +N+     N FRI  S    +RGCS   D  +RR D N    + A +   
Sbjct: 72   SLDYNNHNNNKNLAASTSNGFRIGLS----MRGCS---DSNKRRVDRNG-HGAFAHSYQQ 123

Query: 966  QLFRDLNGPRVEDERKDNVFTGNGAVEHGNSLGFSGHTTVPEKLVVAVDVDEVLGNFVSA 787
            Q+ RD      +      + TG+GA  HG  LGF     +PEK+VVAVDVDEVLGNFVSA
Sbjct: 124  QVLRDFEIGLPDA----GIPTGHGASHHGKLLGFPLRP-LPEKIVVAVDVDEVLGNFVSA 178

Query: 786  LNKFIADRYSMNHSVSEYHVYEFFKIWNCSRDEADIRVHEFFKTSYFKKGILPIPGSQSA 607
            LN+FIADRYS+ HSVSEYHVYEFFKIWNCSRDEADIRVHEFFKTSYFK GI PIPG+Q A
Sbjct: 179  LNRFIADRYSLKHSVSEYHVYEFFKIWNCSRDEADIRVHEFFKTSYFKTGIHPIPGAQQA 238

Query: 606  LLKLSKFCNLSIVTSRQNVIKDHTIEWIEDHYPGLFQEIHFGNHFALDGKSRPKSDICRS 427
            L KLS+FCNLSIVTSRQN IKDHTIEWIE HYPGLFQEIHFGNHFALDG+SRPKS+ICRS
Sbjct: 239  LHKLSRFCNLSIVTSRQNAIKDHTIEWIEKHYPGLFQEIHFGNHFALDGESRPKSEICRS 298

Query: 426  LGARVLIDDNPRYAIECANAGMRVLLFDYENSYPWSKTGSATVHPSVTKVHNWEEVEQQL 247
            LGA+VLIDDNPRYAIECA  G+RVLLFDYENSYPW KT S + HP VTKVH+WEEVEQQL
Sbjct: 299  LGAKVLIDDNPRYAIECAEIGIRVLLFDYENSYPWCKTESVSQHPLVTKVHDWEEVEQQL 358

Query: 246  LSWVMS 229
            +SW++S
Sbjct: 359  VSWIVS 364


>ref|XP_002277240.1| PREDICTED: uncharacterized protein LOC100261032 [Vitis vinifera]
          Length = 349

 Score =  405 bits (1040), Expect = e-110
 Identities = 223/362 (61%), Positives = 257/362 (70%), Gaps = 9/362 (2%)
 Frame = -1

Query: 1287 ILKRQTLR-LFFSQQFAHLDKKTSLSNLGVMALLFKDPLI---ASFNTFSRINGS----- 1135
            ++KRQ++R LF ++ F           L VMA L +   +   A+FN      G      
Sbjct: 1    MIKRQSVRFLFLARIFGKHPHHHHRHRLVVMASLLQHHGLLHTATFNDRLPFMGKISLDY 60

Query: 1134 NQSRFPQNVKVDAGNDFRINASGEFNLRGCSEHFDEFQRRGDNNKFQKSHAMAMYPQLFR 955
            N     +N+     N FRI  S    +RGCS   D  +RR D N    + A +   Q+ R
Sbjct: 61   NNHNNNKNLAASTSNGFRIGLS----MRGCS---DSNKRRVDRNG-HGAFAHSYQQQVLR 112

Query: 954  DLNGPRVEDERKDNVFTGNGAVEHGNSLGFSGHTTVPEKLVVAVDVDEVLGNFVSALNKF 775
            D      +      + TG+GA  HG  LGF     +PEK+VVAVDVDEVLGNFVSALN+F
Sbjct: 113  DFEIGLPDA----GIPTGHGASHHGKLLGFPLRP-LPEKIVVAVDVDEVLGNFVSALNRF 167

Query: 774  IADRYSMNHSVSEYHVYEFFKIWNCSRDEADIRVHEFFKTSYFKKGILPIPGSQSALLKL 595
            IADRYS+ HSVSEYHVYEFFKIWNCSRDEADIRVHEFFKTSYFK GI PIPG+Q AL KL
Sbjct: 168  IADRYSLKHSVSEYHVYEFFKIWNCSRDEADIRVHEFFKTSYFKTGIHPIPGAQQALHKL 227

Query: 594  SKFCNLSIVTSRQNVIKDHTIEWIEDHYPGLFQEIHFGNHFALDGKSRPKSDICRSLGAR 415
            S+FCNLSIVTSRQN IKDHTIEWIE HYPGLFQEIHFGNHFALDG+SRPKS+ICRSLGA+
Sbjct: 228  SRFCNLSIVTSRQNAIKDHTIEWIEKHYPGLFQEIHFGNHFALDGESRPKSEICRSLGAK 287

Query: 414  VLIDDNPRYAIECANAGMRVLLFDYENSYPWSKTGSATVHPSVTKVHNWEEVEQQLLSWV 235
            VLIDDNPRYAIECA  G+RVLLFDYENSYPW KT S + HP VTKVH+WEEVEQQL+SW+
Sbjct: 288  VLIDDNPRYAIECAEIGIRVLLFDYENSYPWCKTESVSQHPLVTKVHDWEEVEQQLVSWI 347

Query: 234  MS 229
            +S
Sbjct: 348  VS 349


>gb|AEJ07951.1| Tac7077 [Sorghum propinquum]
          Length = 374

 Score =  368 bits (945), Expect = 2e-99
 Identities = 191/318 (60%), Positives = 225/318 (70%), Gaps = 11/318 (3%)
 Frame = -1

Query: 1152 SRINGSNQSRFPQNVKV----DAGNDFRINASGEFNLRGCSEHFD----EFQRRGDNNKF 997
            +R  G +    P N  V     AG   R   SG  +L+GC    D    EF+RR D    
Sbjct: 55   ARCGGESGRTLPGNKAVFLDLGAGTGRRFAPSGALSLKGCLGWQDGGGGEFRRRVDGEAA 114

Query: 996  -QKSHAMAMYPQLFRDLNG--PRVEDERKDNVFTGNGAVEHGNSLGFSGHTTVPEKLVVA 826
              K+  +    QL RD     P  E         GNGA   G  LGF     V  K+VVA
Sbjct: 115  GMKAQVLTTQRQLMRDPEVLLPLEESAASVKSINGNGACRRGKPLGFP-EQPVAAKMVVA 173

Query: 825  VDVDEVLGNFVSALNKFIADRYSMNHSVSEYHVYEFFKIWNCSRDEADIRVHEFFKTSYF 646
            VDVDEVLG+F++ALNKFIADRYS NHSVSEYHVYEFFKIWNCSR+ A+  VHEFF T YF
Sbjct: 174  VDVDEVLGSFLAALNKFIADRYSWNHSVSEYHVYEFFKIWNCSRERANFLVHEFFTTQYF 233

Query: 645  KKGILPIPGSQSALLKLSKFCNLSIVTSRQNVIKDHTIEWIEDHYPGLFQEIHFGNHFAL 466
            + GI PIPG++ AL  LS FC+LS+VTSRQ+VIK+HT+EWIE +YPGLF++IHFGNHFAL
Sbjct: 234  QDGIHPIPGARDALQTLSSFCSLSVVTSRQDVIKNHTLEWIEKYYPGLFEQIHFGNHFAL 293

Query: 465  DGKSRPKSDICRSLGARVLIDDNPRYAIECANAGMRVLLFDYENSYPWSKTGSATVHPSV 286
            +G+SRPKS+ICRS GA+VLIDDNPRYA+ECAN GMRVLLFDY+NSYPW KTG   +HP V
Sbjct: 294  EGQSRPKSEICRSFGAQVLIDDNPRYALECANDGMRVLLFDYDNSYPWCKTGVDELHPLV 353

Query: 285  TKVHNWEEVEQQLLSWVM 232
            TKVHNWEEVE++LLSWV+
Sbjct: 354  TKVHNWEEVEEKLLSWVV 371


>ref|XP_002516184.1| conserved hypothetical protein [Ricinus communis]
           gi|223544670|gb|EEF46186.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 231

 Score =  367 bits (943), Expect = 4e-99
 Identities = 173/223 (77%), Positives = 191/223 (85%)
 Frame = -1

Query: 903 GNGAVEHGNSLGFSGHTTVPEKLVVAVDVDEVLGNFVSALNKFIADRYSMNHSVSEYHVY 724
           G+G  + G  LGF  +  +   +VVAVDVDEVLGNFVSALN+FIADRYS NHSVSEYHVY
Sbjct: 9   GHGTCQGGKPLGFPDYP-ITGNIVVAVDVDEVLGNFVSALNRFIADRYSSNHSVSEYHVY 67

Query: 723 EFFKIWNCSRDEADIRVHEFFKTSYFKKGILPIPGSQSALLKLSKFCNLSIVTSRQNVIK 544
           EFFKIWNCSRDEADIRVHEFFKTSYFK GI PIPG+Q  L KLS+ C LS+VTSRQNVIK
Sbjct: 68  EFFKIWNCSRDEADIRVHEFFKTSYFKSGIYPIPGAQKVLQKLSRLCKLSVVTSRQNVIK 127

Query: 543 DHTIEWIEDHYPGLFQEIHFGNHFALDGKSRPKSDICRSLGARVLIDDNPRYAIECANAG 364
           DHT+EWIE HYPG+FQEIHFGNHFALDG+SRPKS+ICRSLGA VLIDDNPRYAIECA  G
Sbjct: 128 DHTVEWIEKHYPGVFQEIHFGNHFALDGESRPKSEICRSLGATVLIDDNPRYAIECAEVG 187

Query: 363 MRVLLFDYENSYPWSKTGSATVHPSVTKVHNWEEVEQQLLSWV 235
           ++VLLFDYENSYPW K  S   HP VTKV NWE+VEQQL+SW+
Sbjct: 188 IKVLLFDYENSYPWCKADSVDQHPLVTKVCNWEQVEQQLISWI 230


>ref|NP_001151136.1| tac7077 [Zea mays] gi|195644522|gb|ACG41729.1| tac7077 [Zea mays]
            gi|223975829|gb|ACN32102.1| unknown [Zea mays]
            gi|413952843|gb|AFW85492.1| Tac7077 isoform 1 [Zea mays]
            gi|413952844|gb|AFW85493.1| Tac7077 isoform 2 [Zea mays]
            gi|413952845|gb|AFW85494.1| Tac7077 isoform 3 [Zea mays]
          Length = 359

 Score =  367 bits (943), Expect = 4e-99
 Identities = 185/299 (61%), Positives = 220/299 (73%), Gaps = 6/299 (2%)
 Frame = -1

Query: 1110 VKVDAGNDFRINASGEFNLRGCSEHFD-----EFQRRGDNNKF-QKSHAMAMYPQLFRDL 949
            V +D G   R   SG  +LRGC    D     EF+RR D      K+  +    QL RD 
Sbjct: 60   VFLDLGAGRRFTPSGALSLRGCLGWRDGGGDGEFRRRVDGEAAGMKAQVLTTQRQLMRDP 119

Query: 948  NGPRVEDERKDNVFTGNGAVEHGNSLGFSGHTTVPEKLVVAVDVDEVLGNFVSALNKFIA 769
                +E+         NGA   G  LGF        K+VVAVDVDEVLG+F++ALNKFIA
Sbjct: 120  EVLPLEEAATGKSMNVNGACRRGKRLGFPEQAAA--KMVVAVDVDEVLGSFLAALNKFIA 177

Query: 768  DRYSMNHSVSEYHVYEFFKIWNCSRDEADIRVHEFFKTSYFKKGILPIPGSQSALLKLSK 589
            DRYS NHSVSEYHVYEFFKIWNCSR+ A+  VHEFF T YF+ GI PIPG++ AL  LS 
Sbjct: 178  DRYSWNHSVSEYHVYEFFKIWNCSRERANFLVHEFFTTHYFQDGIHPIPGARDALQTLSS 237

Query: 588  FCNLSIVTSRQNVIKDHTIEWIEDHYPGLFQEIHFGNHFALDGKSRPKSDICRSLGARVL 409
            FC+LS+VTSRQ+VIK+HT+EWIE +YPGLF++IHFGNHFAL+G+SRPKS+ICRS GA+VL
Sbjct: 238  FCSLSVVTSRQDVIKNHTLEWIEKYYPGLFEQIHFGNHFALEGQSRPKSEICRSFGAQVL 297

Query: 408  IDDNPRYAIECANAGMRVLLFDYENSYPWSKTGSATVHPSVTKVHNWEEVEQQLLSWVM 232
            IDDNPRYA+ECAN GMRVLLFDYE+SYPW KTG+  +HP VTKVHNWEEVE++LLSWV+
Sbjct: 298  IDDNPRYALECANDGMRVLLFDYESSYPWCKTGADELHPLVTKVHNWEEVEEKLLSWVV 356


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