BLASTX nr result

ID: Coptis24_contig00015178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015178
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73202.1| hypothetical protein VITISV_023204 [Vitis vinifera]   124   8e-27
ref|XP_002333822.1| predicted protein [Populus trichocarpa] gi|2...   123   1e-26
emb|CBI20425.3| unnamed protein product [Vitis vinifera]              122   3e-26
ref|XP_003635171.1| PREDICTED: G-type lectin S-receptor-like ser...   122   4e-26
ref|XP_002530266.1| S-locus-specific glycoprotein S13 precursor,...   122   4e-26

>emb|CAN73202.1| hypothetical protein VITISV_023204 [Vitis vinifera]
          Length = 663

 Score =  124 bits (311), Expect = 8e-27
 Identities = 64/107 (59%), Positives = 76/107 (71%)
 Frame = -1

Query: 345 FGVLLLEIVSSKKNNSFCLPEESYNNLIGFVWQLWNENKALELMDPTLVESYNSQELMRC 166
           FGVLLLEIVSS++N SF   E S + LI + W LW E K LELMD TL ES + +E+MRC
Sbjct: 536 FGVLLLEIVSSRRNTSFYQNEHSLS-LITYAWNLWKEGKGLELMDSTLSESCSPEEVMRC 594

Query: 165 IHMGLLCVQDHALDRPTMSTIVSMLCSDATLPIPKQPAFTLERSCEQ 25
           IH+GLLCVQ+H  D P+MS  V ML  +   P+PKQPAFTLE S  Q
Sbjct: 595 IHVGLLCVQEHVNDXPSMSNAVFMLGGETXRPVPKQPAFTLEGSPRQ 641


>ref|XP_002333822.1| predicted protein [Populus trichocarpa] gi|222838641|gb|EEE77006.1|
           predicted protein [Populus trichocarpa]
          Length = 371

 Score =  123 bits (309), Expect = 1e-26
 Identities = 56/104 (53%), Positives = 81/104 (77%)
 Frame = -1

Query: 345 FGVLLLEIVSSKKNNSFCLPEESYNNLIGFVWQLWNENKALELMDPTLVESYNSQELMRC 166
           FGVLLLE+++ +KN +F   E + +NL+G+VW LW+E +ALEL+D  + +SY   +++RC
Sbjct: 243 FGVLLLEVITGRKNINF-YDESNSSNLVGYVWDLWSEGRALELVDTLMGDSYPEDQVLRC 301

Query: 165 IHMGLLCVQDHALDRPTMSTIVSMLCSDATLPIPKQPAFTLERS 34
           I +GLLCVQ+ A+DRP+MS +V ML +D TLP PKQPAF L++S
Sbjct: 302 IQIGLLCVQESAMDRPSMSNVVFMLSNDTTLPSPKQPAFILKKS 345


>emb|CBI20425.3| unnamed protein product [Vitis vinifera]
          Length = 862

 Score =  122 bits (306), Expect = 3e-26
 Identities = 63/107 (58%), Positives = 78/107 (72%), Gaps = 1/107 (0%)
 Frame = -1

Query: 345  FGVLLLEIVSSKKNNSFCLPEESYNNLIGFVWQLWNENKALELMDPTLVESYNSQELMRC 166
            FGVLLLEIVSSKKN  FC P+  ++NL+G  W LWNE K +ELMD  L +S    +++RC
Sbjct: 737  FGVLLLEIVSSKKNRGFCHPDH-HHNLLGHAWLLWNERKTMELMDAGLKDSCIESQVLRC 795

Query: 165  IHMGLLCVQDHALDRPTMSTIVSMLCS-DATLPIPKQPAFTLERSCE 28
            I +GLLCVQ   +DRPTMS+I+ ML + +ATLP PKQP F  ERS E
Sbjct: 796  IQVGLLCVQKLPVDRPTMSSIIFMLGNEEATLPQPKQPGFFFERSSE 842



 Score =  102 bits (255), Expect = 3e-20
 Identities = 56/110 (50%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
 Frame = -1

Query: 345 FGVLLLEIVSSKKNNSFCLPEESYNNLIGFVWQLWNENKALELMDPTLVESYNSQELMRC 166
           FGVLLLEIVS KKN  F  P   ++NL+G  W LWNE+KALELMD  L +S    ++ RC
Sbjct: 20  FGVLLLEIVSGKKNRGFSHPHH-HHNLLGHAWMLWNEDKALELMDACLRDSCVESQVPRC 78

Query: 165 IHMGLLCVQDHALDRPTMSTIVSML-CSDATLPIPKQPAFTLERSCEQPE 19
           I + L CVQ    +RPT+S+++  L   +A LP PKQP F  ERS    E
Sbjct: 79  IQVDLFCVQKLPANRPTISSVIFTLGHEEAVLPQPKQPGFFRERSSVDDE 128


>ref|XP_003635171.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein
           kinase RKS1-like [Vitis vinifera]
          Length = 392

 Score =  122 bits (305), Expect = 4e-26
 Identities = 55/118 (46%), Positives = 87/118 (73%), Gaps = 3/118 (2%)
 Frame = -1

Query: 345 FGVLLLEIVSSKKNNSFCLPEESYNNLIGFVWQLWNENKALELMDPTLVESYNSQELMRC 166
           FGVLLLEI++ +KN ++     S+N L+G+VW LW E+KAL+++D +L +  ++ E++RC
Sbjct: 267 FGVLLLEIITGRKNTTYYYGSPSFN-LVGYVWSLWTESKALDIVDLSLEKPNHTNEVLRC 325

Query: 165 IHMGLLCVQDHALDRPTMSTIVSMLCSDATLPIPKQPAFTLE---RSCEQPEIPSNIN 1
           +H+GLLCVQ+  +DRPTM TI+SML +++TLP+P QPAF ++        P + ++IN
Sbjct: 326 VHIGLLCVQEFVIDRPTMLTIISMLGNNSTLPLPNQPAFVVKPCHNDANSPSVEASIN 383


>ref|XP_002530266.1| S-locus-specific glycoprotein S13 precursor, putative [Ricinus
            communis] gi|223530198|gb|EEF32106.1| S-locus-specific
            glycoprotein S13 precursor, putative [Ricinus communis]
          Length = 793

 Score =  122 bits (305), Expect = 4e-26
 Identities = 57/119 (47%), Positives = 88/119 (73%), Gaps = 4/119 (3%)
 Frame = -1

Query: 345  FGVLLLEIVSSKKNNSFCLPEESYNNLIGFVWQLWNENKALELMDPTLVESYNSQELMRC 166
            +GV+LLE+++ KKNN+FCL E+S ++LI + W++W E++ALE++D +L ESY+S E +RC
Sbjct: 666  YGVILLEVIAGKKNNNFCL-EDSSSSLIEYAWEMWIEDRALEIIDSSLKESYDSHEALRC 724

Query: 165  IHMGLLCVQDHALDRPTMSTIVSMLCSDATLPIPKQPAFTLER----SCEQPEIPSNIN 1
            I +GLLCVQ + +DRPTMS ++ ML S+ +LP PKQ AF + +     C + E   ++N
Sbjct: 725  IQIGLLCVQANEMDRPTMSNVLLMLSSEISLPSPKQSAFIVSKRFYNDCVREERSCSVN 783


Top