BLASTX nr result

ID: Coptis24_contig00015177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015177
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE04647.2| OSJNBa0061G20.3 [Oryza sativa Japonica Group]          76   6e-12
ref|NP_001172748.1| Os01g0954600 [Oryza sativa Japonica Group] g...    76   6e-12
ref|XP_002466618.1| hypothetical protein SORBIDRAFT_01g011130 [S...    75   1e-11
emb|CAD41785.1| OSJNBa0035M09.1 [Oryza sativa Japonica Group] gi...    75   1e-11
ref|XP_002521812.1| conserved hypothetical protein [Ricinus comm...    75   1e-11

>emb|CAE04647.2| OSJNBa0061G20.3 [Oryza sativa Japonica Group]
          Length = 1463

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 8/177 (4%)
 Frame = -2

Query: 627  EQTLADKMKWNGDKYGQLTAKSAY--RFLKPEDEVGQSSSCNPHSLTQVWKSPLPAFIQM 454
            E+ + D + W     G+ TAKSAY  +F   ED           + T +WK+  P+  + 
Sbjct: 1267 EEGVEDTITWRWTNTGKYTAKSAYLAQFAGREDS---------RAATLIWKTWAPSKCKK 1317

Query: 453  FIWKLYMHMLPMGDILAERKIKGELSCPFCLRELETAEHLFFTCEWTRTVWYGSILGLRT 274
            F W +  + +   D L  R+      C  C R LE A+HLF  C +TR +W   +  +  
Sbjct: 1318 FAWLVLQNRIWTSDRLQLRQWPNNYFCQLCYRNLEMAQHLFKDCPFTREIWDKIMARMNH 1377

Query: 273  PQHLPIRQRLDRLILWSCSKDRDQA------MAGIHMAFILYHIWTSRNELKFENRK 121
             Q  P+    + L+ W  S+ + Q+      M  +H+  + + IW  RN   F++++
Sbjct: 1378 NQPFPVHNTDESLVDWWESRTKQQSKCQSKGMQSLHI-LLSWEIWCERNRRVFKDKE 1433


>ref|NP_001172748.1| Os01g0954600 [Oryza sativa Japonica Group]
           gi|255674083|dbj|BAH91478.1| Os01g0954600 [Oryza sativa
           Japonica Group]
          Length = 225

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 8/177 (4%)
 Frame = -2

Query: 627 EQTLADKMKWNGDKYGQLTAKSAY--RFLKPEDEVGQSSSCNPHSLTQVWKSPLPAFIQM 454
           E+ + D + W     G+ TAKSAY  +F   ED           + T +WK+  P+  + 
Sbjct: 22  EEVVEDTITWRWTNTGKYTAKSAYLAQFAGREDS---------RAATLIWKTWAPSKCKN 72

Query: 453 FIWKLYMHMLPMGDILAERKIKGELSCPFCLRELETAEHLFFTCEWTRTVWYGSILGLRT 274
           F W +  + +   D L  R+      C  C R LET +HLF  C +T+ +W   +  +  
Sbjct: 73  FAWLVLQNRIWTSDRLQLRQWPNNYFCQLCYRNLETVQHLFKDCPFTQEIWDKIMARMNH 132

Query: 273 PQHLPIRQRLDRLILWSCSKDRDQA------MAGIHMAFILYHIWTSRNELKFENRK 121
            Q  P+    + L+ W  S+ + Q+      M  +HM  + + IW  RN   F++++
Sbjct: 133 NQPFPMHNPDESLVDWWESRTKQQSKCQSKGMQSLHM-LLSWEIWCERNRRVFKDKE 188


>ref|XP_002466618.1| hypothetical protein SORBIDRAFT_01g011130 [Sorghum bicolor]
           gi|241920472|gb|EER93616.1| hypothetical protein
           SORBIDRAFT_01g011130 [Sorghum bicolor]
          Length = 463

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 14/190 (7%)
 Frame = -2

Query: 624 QTLADKMKWNGDKYGQLTAKSAYR-----FLKPEDEVGQSSSCNPHSLT---QVWKSPLP 469
           Q  ++ + W+ DK+G  + KSAY+     +++     GQ    NP  L+   +VWK   P
Sbjct: 92  QGRSNMVAWHYDKHGVFSVKSAYKVARDTYIRNHTSQGQQGGSNPGPLSLWKRVWKLSCP 151

Query: 468 AFIQMFIWKLYMHMLPMGDILAERKIKGELSCPFCLRELETAEHLFFTCEWTRTVWYGSI 289
             I+ F+W+   +  P+ D L  R ++    CP C +  E   HLFF C   R VW   +
Sbjct: 152 NKIKHFLWRFLHNSHPLRDNLIRRGMEIVPRCPVCNQVGEDGGHLFFKCGMARQVW--EL 209

Query: 288 LGLRTPQ------HLPIRQRLDRLILWSCSKDRDQAMAGIHMAFILYHIWTSRNELKFEN 127
           LGL T +      + PI   +   IL      R      + M   L++ W+ RN ++ E+
Sbjct: 210 LGLSTEREVLANFYTPI--DVVEFIL------RASESRKLMMIVALWYTWSERNAIREED 261

Query: 126 RKANRERILR 97
           R+ + + + R
Sbjct: 262 RRRSPQTLAR 271


>emb|CAD41785.1| OSJNBa0035M09.1 [Oryza sativa Japonica Group]
            gi|38346911|emb|CAE03883.2| OSJNBb0015N08.11 [Oryza
            sativa Japonica Group]
          Length = 1026

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 2/168 (1%)
 Frame = -2

Query: 612  DKMKWNGDKYGQLTAKSAYRFLKPEDEVGQSSSCNPHSLTQVWKSPLPAFIQMFIWKLYM 433
            DK+ W   K G+ T +S YR LK +    Q+S  N     ++WK  +P  I++FIW    
Sbjct: 811  DKLWWTLSKDGKFTVRSFYRALKLQ----QTSFPNK----KIWKFRVPLKIRIFIWFFTK 862

Query: 432  HMLPMGDILAERKI-KGELSCPFCLRELETAEHLFFTCEWTRTVWYGSILGLRTPQHLPI 256
            + +   D L +R   KG+  C FC  ++ET +HLFF C   R +W      L      P+
Sbjct: 863  NKILTKDNLLKRGWRKGDNKCQFC-DKVETVQHLFFDCPLARLIWNIIACALNVK---PV 918

Query: 255  RQRLDRLILWSCSKDR-DQAMAGIHMAFILYHIWTSRNELKFENRKAN 115
              R D    W  S D+  + +  + +A +L+ IW  RN+  FE +  N
Sbjct: 919  LSRQDLFGSWIQSMDKFTKNLVIVGIAAVLWSIWKCRNKACFERKLPN 966


>ref|XP_002521812.1| conserved hypothetical protein [Ricinus communis]
           gi|223539025|gb|EEF40622.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 315

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 11/203 (5%)
 Frame = -2

Query: 651 ILNIKVRPEQTLADKMKWNGDKYGQLTAKSAYRFLKPEDEVGQSSSCNP-----HSLTQV 487
           IL + +  +  + D++KW+     + +  S Y      + +G  S+        H    +
Sbjct: 115 ILEVSLSTKNAI-DRLKWHYHNSSRYSVGSGYFAWVHRERIGHHSNLQEATAVLHHCKNL 173

Query: 486 WKSPLPAFIQMFIWKLYMHMLPMGDILAERKIKGELSCPFCLRELETAEHLFFTCEWTRT 307
           WK  +P  I++FIWKL+   LP+G   A R +  + SC +C    ++  HLFF C +++ 
Sbjct: 174 WKMKIPNKIKIFIWKLFSIALPVGSSSASR-LGADGSCIWC-GAWKSRMHLFFLCPFSQH 231

Query: 306 VWYGSILGLRTPQHLP-IRQRLDRLILW-SCSKDRDQAMAGIHM----AFILYHIWTSRN 145
           VW  S L L     LP +    D  ++W     D     +  H+    AFIL+HIW +RN
Sbjct: 232 VWSLSPLRL-----LPSVFHLSDISLVWEKILLDIQTLSSNDHLPSCPAFILWHIWKARN 286

Query: 144 ELKFENRKANRERILRESSSQAD 76
              F+NR  + + +L  + +  D
Sbjct: 287 ASVFDNRWTSEQGLLHRALTDLD 309


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