BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015174
         (1031 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331415.1| predicted protein [Populus trichocarpa] gi|2...   225   2e-56
ref|XP_002866951.1| pentatricopeptide repeat-containing protein ...   179   1e-42
ref|XP_003610281.1| Pentatricopeptide repeat-containing protein ...   178   2e-42
ref|XP_002309169.1| predicted protein [Populus trichocarpa] gi|2...   177   4e-42
ref|XP_003635569.1| PREDICTED: pentatricopeptide repeat-containi...   177   5e-42

>ref|XP_002331415.1| predicted protein [Populus trichocarpa] gi|222873629|gb|EEF10760.1|
           predicted protein [Populus trichocarpa]
          Length = 458

 Score =  225 bits (573), Expect = 2e-56
 Identities = 105/154 (68%), Positives = 124/154 (80%)
 Frame = +2

Query: 2   WKQAAMVRSLMEGRGLVKEPGWSQIEVDGLLHVFLVGDRSHDWSVEIYXXXXXXXXXXXX 181
           WK+AA+ RSLM  RGLVK PGWSQ+E++G +HVF+ GDRSH  S++IY            
Sbjct: 305 WKEAAVTRSLMIDRGLVKAPGWSQVEINGSVHVFIAGDRSHTQSIDIYKKLEEINLKLAE 364

Query: 182 IGYVAETQMVIHDLEKEDKEEALGVHSERLAVAFGLLSTEPGSTLRIMKNLRTCTDCHTA 361
            GYV ET  VIHDLE+E+KEEAL VHSERLA+AFGL+STE GSTLRIMKN RTC DCH+A
Sbjct: 365 AGYVPETDTVIHDLEREEKEEALKVHSERLAIAFGLISTEAGSTLRIMKNHRTCVDCHSA 424

Query: 362 LKFISKITCRYLIVRDGNRFHHFQAGSCSCKDFW 463
           LKFISKIT R+LIVRDG+RFHHF++G C+CKDFW
Sbjct: 425 LKFISKITGRHLIVRDGSRFHHFESGKCTCKDFW 458


>ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297312787|gb|EFH43210.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 630

 Score =  179 bits (453), Expect = 1e-42
 Identities = 86/154 (55%), Positives = 107/154 (69%)
 Frame = +2

Query: 2   WKQAAMVRSLMEGRGLVKEPGWSQIEVDGLLHVFLVGDRSHDWSVEIYXXXXXXXXXXXX 181
           ++  A VR+LM+ +G+VKEPG S IE+D  +H F  GDR H  S EIY            
Sbjct: 477 YEGVAKVRNLMKEKGIVKEPGISTIEIDNKVHEFRAGDREHLKSKEIYTMLRKMSERIKS 536

Query: 182 IGYVAETQMVIHDLEKEDKEEALGVHSERLAVAFGLLSTEPGSTLRIMKNLRTCTDCHTA 361
            GYV  T  V+HDLE+ +KE +L VHSERLA+A+GL+ST+PGS L+I KNLR C+DCHT 
Sbjct: 537 HGYVPNTNTVLHDLEETEKERSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTV 596

Query: 362 LKFISKITCRYLIVRDGNRFHHFQAGSCSCKDFW 463
            K ISKIT R +++RD NRFHHF  GSCSC DFW
Sbjct: 597 TKLISKITGRKIVMRDRNRFHHFSDGSCSCDDFW 630


>ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355511336|gb|AES92478.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 783

 Score =  178 bits (451), Expect = 2e-42
 Identities = 83/152 (54%), Positives = 110/152 (72%)
 Frame = +2

Query: 8    QAAMVRSLMEGRGLVKEPGWSQIEVDGLLHVFLVGDRSHDWSVEIYXXXXXXXXXXXXIG 187
            +AA +R +++ R L K PG + IEV+G  HVF+ GDRSH  + +IY            +G
Sbjct: 632  KAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAKLEKLTGKMREMG 691

Query: 188  YVAETQMVIHDLEKEDKEEALGVHSERLAVAFGLLSTEPGSTLRIMKNLRTCTDCHTALK 367
            Y AET   +HD+E+E+KE A+ VHSE+LA+AFGL++TEPG+ +RI+KNLR C DCHTA K
Sbjct: 692  YQAETVPALHDVEEEEKELAVNVHSEKLAIAFGLITTEPGNEIRIIKNLRVCLDCHTATK 751

Query: 368  FISKITCRYLIVRDGNRFHHFQAGSCSCKDFW 463
            FISKIT R ++VRD NRFHHF+ G CSC D+W
Sbjct: 752  FISKITERVIVVRDANRFHHFKDGICSCGDYW 783


>ref|XP_002309169.1| predicted protein [Populus trichocarpa] gi|222855145|gb|EEE92692.1|
           predicted protein [Populus trichocarpa]
          Length = 619

 Score =  177 bits (449), Expect = 4e-42
 Identities = 83/154 (53%), Positives = 106/154 (68%)
 Frame = +2

Query: 2   WKQAAMVRSLMEGRGLVKEPGWSQIEVDGLLHVFLVGDRSHDWSVEIYXXXXXXXXXXXX 181
           W+ AA +RS+M  RG+ K PG+S IEVDG++H FLVGD SH  S +IY            
Sbjct: 466 WEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHEFLVGDTSHPLSEKIYAKLGELVKDLKA 525

Query: 182 IGYVAETQMVIHDLEKEDKEEALGVHSERLAVAFGLLSTEPGSTLRIMKNLRTCTDCHTA 361
            GYV  T  V+ D+E+E+KE  +G HSE+LA+AFGL+ST P   +R++KNLR C DCH A
Sbjct: 526 SGYVPTTDYVLFDIEEEEKEHFIGCHSEKLAIAFGLISTAPNDKIRVVKNLRVCGDCHEA 585

Query: 362 LKFISKITCRYLIVRDGNRFHHFQAGSCSCKDFW 463
           +K IS+ T R +IVRD NRFH F  GSCSCKD+W
Sbjct: 586 IKHISRFTGREIIVRDNNRFHCFNDGSCSCKDYW 619


>ref|XP_003635569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like, partial [Vitis vinifera]
          Length = 287

 Score =  177 bits (448), Expect = 5e-42
 Identities = 84/154 (54%), Positives = 108/154 (70%)
 Frame = +2

Query: 2   WKQAAMVRSLMEGRGLVKEPGWSQIEVDGLLHVFLVGDRSHDWSVEIYXXXXXXXXXXXX 181
           W   A VR +M+ RG+VK+PG S IE+   +HVFLVGD SH  S EI+            
Sbjct: 134 WGGVAEVRKVMDARGVVKKPGLSWIEIKREVHVFLVGDTSHAKSKEIHEFLGKLSKRMKE 193

Query: 182 IGYVAETQMVIHDLEKEDKEEALGVHSERLAVAFGLLSTEPGSTLRIMKNLRTCTDCHTA 361
            GYV +T  V+HD+E+E KE+ L  HSE+LAVAFG++ST  G+ +++ KNLRTC DCHTA
Sbjct: 194 EGYVPDTNFVLHDVEEEQKEQNLSYHSEKLAVAFGIISTPAGTLIKVFKNLRTCVDCHTA 253

Query: 362 LKFISKITCRYLIVRDGNRFHHFQAGSCSCKDFW 463
           +KFISKI  R +IVRD NRFH F+ GSCSC+D+W
Sbjct: 254 IKFISKIAKRKIIVRDSNRFHCFEDGSCSCRDYW 287