BLASTX nr result

ID: Coptis24_contig00015162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015162
         (957 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004172977.1| PREDICTED: uncharacterized LOC101206044 [Cuc...   448   e-124
ref|XP_004141389.1| PREDICTED: uncharacterized protein LOC101206...   448   e-124
ref|XP_002282947.1| PREDICTED: uncharacterized protein LOC100248...   447   e-123
ref|XP_003588975.1| hypothetical protein MTR_1g015930 [Medicago ...   429   e-118
ref|XP_002510181.1| nucleic acid binding protein, putative [Rici...   426   e-117

>ref|XP_004172977.1| PREDICTED: uncharacterized LOC101206044 [Cucumis sativus]
          Length = 420

 Score =  448 bits (1153), Expect = e-124
 Identities = 219/307 (71%), Positives = 259/307 (84%), Gaps = 2/307 (0%)
 Frame = -3

Query: 949 LLHLKSPSPFFSPTVNSLKPDFKTTKR--LHTITCCGSKHAAVTDIDMVRNRQGIYSAKP 776
           LL   +P  F       +KP F+ + R  +      G+  A+ + IDMVRNR+GI++AK 
Sbjct: 23  LLFSNNPIHFKHRVSVVVKPTFQASFRWRIRATAENGASSASTSQIDMVRNREGIFTAKQ 82

Query: 775 KRVVVLWDLDNKPPRGPPYQAAMALIQLAQCFGHVVDISAYANRHAFIHLPQWVREERSQ 596
            +VVVLWDLDNKPPRGPPY+AAMAL ++AQ FG VVD+SAYANRHAFIHLPQWV EER +
Sbjct: 83  SKVVVLWDLDNKPPRGPPYEAAMALKRVAQRFGQVVDMSAYANRHAFIHLPQWVVEERRE 142

Query: 595 RKQVDILERKGMITPSEPYVCNVCGRKCRTNLDLKKHFKQLHEREREKKLSRMRSLKGKK 416
           R+Q+DILERKG+ TPSE YVC VCGRKC+TNLDLKKHFKQLHERER+KKL+RMRSLKGKK
Sbjct: 143 RRQLDILERKGLFTPSESYVCGVCGRKCKTNLDLKKHFKQLHERERQKKLNRMRSLKGKK 202

Query: 415 RQKYKERFISGNTKYEEGARNLLSPKVGYGLASELRRAGVFVKMVEDKPQSADRALKRQM 236
           RQ+YKERF+SGN KY E AR++++PKVGYGLASELRRAG FVK VEDKPQ+AD ALK+QM
Sbjct: 203 RQRYKERFVSGNHKYNEAARSVITPKVGYGLASELRRAGFFVKTVEDKPQAADWALKKQM 262

Query: 235 QHSMSRGIDWMFLVTDDSDFSDMLRSARESNLQTVVVGDSDRALGRNADLWVPWLRVENG 56
           QHSMSRGIDWMFLV+DDSDFS+MLR A+E+NL TVVVGD DRALGR+ADLWVPW+ VENG
Sbjct: 263 QHSMSRGIDWMFLVSDDSDFSEMLRKAKEANLGTVVVGDRDRALGRHADLWVPWMGVENG 322

Query: 55  EIGEEEL 35
           ++ EE+L
Sbjct: 323 DVTEEDL 329


>ref|XP_004141389.1| PREDICTED: uncharacterized protein LOC101206044 [Cucumis sativus]
          Length = 420

 Score =  448 bits (1153), Expect = e-124
 Identities = 219/307 (71%), Positives = 259/307 (84%), Gaps = 2/307 (0%)
 Frame = -3

Query: 949 LLHLKSPSPFFSPTVNSLKPDFKTTKR--LHTITCCGSKHAAVTDIDMVRNRQGIYSAKP 776
           LL   +P  F       +KP F+ + R  +      G+  A+ + IDMVRNR+GI++AK 
Sbjct: 23  LLFSNNPIHFKHRVSVVVKPTFQASFRWRIRATAENGASSASTSQIDMVRNREGIFTAKQ 82

Query: 775 KRVVVLWDLDNKPPRGPPYQAAMALIQLAQCFGHVVDISAYANRHAFIHLPQWVREERSQ 596
            +VVVLWDLDNKPPRGPPY+AAMAL ++AQ FG VVD+SAYANRHAFIHLPQWV EER +
Sbjct: 83  SKVVVLWDLDNKPPRGPPYEAAMALKRVAQRFGQVVDMSAYANRHAFIHLPQWVVEERRE 142

Query: 595 RKQVDILERKGMITPSEPYVCNVCGRKCRTNLDLKKHFKQLHEREREKKLSRMRSLKGKK 416
           R+Q+DILERKG+ TPSE YVC VCGRKC+TNLDLKKHFKQLHERER+KKL+RMRSLKGKK
Sbjct: 143 RRQLDILERKGLFTPSESYVCGVCGRKCKTNLDLKKHFKQLHERERQKKLNRMRSLKGKK 202

Query: 415 RQKYKERFISGNTKYEEGARNLLSPKVGYGLASELRRAGVFVKMVEDKPQSADRALKRQM 236
           RQ+YKERF+SGN KY E AR++++PKVGYGLASELRRAG FVK VEDKPQ+AD ALK+QM
Sbjct: 203 RQRYKERFVSGNHKYNEAARSVITPKVGYGLASELRRAGFFVKTVEDKPQAADWALKKQM 262

Query: 235 QHSMSRGIDWMFLVTDDSDFSDMLRSARESNLQTVVVGDSDRALGRNADLWVPWLRVENG 56
           QHSMSRGIDWMFLV+DDSDFS+MLR A+E+NL TVVVGD DRALGR+ADLWVPW+ VENG
Sbjct: 263 QHSMSRGIDWMFLVSDDSDFSEMLRKAKEANLGTVVVGDRDRALGRHADLWVPWMGVENG 322

Query: 55  EIGEEEL 35
           ++ EE+L
Sbjct: 323 DVTEEDL 329


>ref|XP_002282947.1| PREDICTED: uncharacterized protein LOC100248940 [Vitis vinifera]
          Length = 444

 Score =  447 bits (1151), Expect = e-123
 Identities = 214/277 (77%), Positives = 245/277 (88%)
 Frame = -3

Query: 835 AAVTDIDMVRNRQGIYSAKPKRVVVLWDLDNKPPRGPPYQAAMALIQLAQCFGHVVDISA 656
           +A  +IDMVRN+ G+Y+AK K+VVVLWDLDNKPPRGPPY AA ALI+LAQ FG +VDISA
Sbjct: 74  SAADEIDMVRNKDGVYTAKRKKVVVLWDLDNKPPRGPPYAAATALIELAQRFGDIVDISA 133

Query: 655 YANRHAFIHLPQWVREERSQRKQVDILERKGMITPSEPYVCNVCGRKCRTNLDLKKHFKQ 476
           YANRHAF+HLPQWV EER +R+++D LERKG+ TP+EPY+C VCGRKCRTNLDLKKHFKQ
Sbjct: 134 YANRHAFVHLPQWVLEERHERRRMDFLERKGITTPAEPYICGVCGRKCRTNLDLKKHFKQ 193

Query: 475 LHEREREKKLSRMRSLKGKKRQKYKERFISGNTKYEEGARNLLSPKVGYGLASELRRAGV 296
           LHERER+KKL+RMRSLKGKKRQ+YKE+FISGNTKYEE AR+L++PKVGYGLASELRRAGV
Sbjct: 194 LHERERQKKLNRMRSLKGKKRQRYKEKFISGNTKYEEAARSLITPKVGYGLASELRRAGV 253

Query: 295 FVKMVEDKPQSADRALKRQMQHSMSRGIDWMFLVTDDSDFSDMLRSARESNLQTVVVGDS 116
           FVK VEDKPQ+AD ALKRQMQHSMSRGIDW+ LV+DDSDF+DMLR ARESNL TVVVGD 
Sbjct: 254 FVKTVEDKPQAADWALKRQMQHSMSRGIDWLVLVSDDSDFADMLRRARESNLGTVVVGDW 313

Query: 115 DRALGRNADLWVPWLRVENGEIGEEELFSARTERDEF 5
            RALGR+ADLWVPW  VEN E+ EE+L      R +F
Sbjct: 314 HRALGRHADLWVPWTGVENREVTEEDLRPRNRRRSDF 350


>ref|XP_003588975.1| hypothetical protein MTR_1g015930 [Medicago truncatula]
           gi|355478023|gb|AES59226.1| hypothetical protein
           MTR_1g015930 [Medicago truncatula]
          Length = 360

 Score =  429 bits (1104), Expect = e-118
 Identities = 210/313 (67%), Positives = 246/313 (78%)
 Frame = -3

Query: 952 LLLHLKSPSPFFSPTVNSLKPDFKTTKRLHTITCCGSKHAAVTDIDMVRNRQGIYSAKPK 773
           L LH  +P  F S     LKP     K    I CC + +  + DIDMV+ +QG Y  K  
Sbjct: 4   LSLHFYTPHSFLS-----LKP-----KPQPRIQCCSTNNNIIDDIDMVKTKQGTYEQKQN 53

Query: 772 RVVVLWDLDNKPPRGPPYQAAMALIQLAQCFGHVVDISAYANRHAFIHLPQWVREERSQR 593
           +V VLWDLDNKPPRGPPY AA++L  LA+ FG V DISAYANRHAFIHLPQWV  +R +R
Sbjct: 54  KVCVLWDLDNKPPRGPPYNAAVSLKNLAERFGDVTDISAYANRHAFIHLPQWVLNQRRER 113

Query: 592 KQVDILERKGMITPSEPYVCNVCGRKCRTNLDLKKHFKQLHEREREKKLSRMRSLKGKKR 413
           K +DILERKG+I P EPYVC+VCGRKC+TN+DLKKHFKQLH+RER+KKL+R+ SLKGKKR
Sbjct: 114 KNLDILERKGIINPPEPYVCSVCGRKCKTNVDLKKHFKQLHQRERQKKLNRLNSLKGKKR 173

Query: 412 QKYKERFISGNTKYEEGARNLLSPKVGYGLASELRRAGVFVKMVEDKPQSADRALKRQMQ 233
           QKYKERF+SG+ KY +  R +L PKVGYGLASELRRAGVFVK VEDKPQ+AD ALK+QM 
Sbjct: 174 QKYKERFVSGDDKYNDAVREILKPKVGYGLASELRRAGVFVKTVEDKPQAADWALKKQMM 233

Query: 232 HSMSRGIDWMFLVTDDSDFSDMLRSARESNLQTVVVGDSDRALGRNADLWVPWLRVENGE 53
           HSMSRGIDW+FLV+DDSDFS+MLR ARE+NL TVVVGD DRALGR+ADLWVPW  VENGE
Sbjct: 234 HSMSRGIDWLFLVSDDSDFSEMLRKAREANLGTVVVGDVDRALGRHADLWVPWNAVENGE 293

Query: 52  IGEEELFSARTER 14
           + + +L     +R
Sbjct: 294 VMDMDLIPRNRDR 306


>ref|XP_002510181.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223550882|gb|EEF52368.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 413

 Score =  426 bits (1094), Expect = e-117
 Identities = 197/278 (70%), Positives = 244/278 (87%), Gaps = 1/278 (0%)
 Frame = -3

Query: 835 AAVTDIDMVRNRQGIYSAKPKRVVVLWDLDNKPPRGPPYQAAMALIQLAQCFGHVVDISA 656
           A+ ++IDMV NRQG+Y++K  +VVVLWDLDNKPPRGPPY AA+AL  LAQ FG ++++SA
Sbjct: 61  ASTSEIDMVPNRQGVYTSKKSKVVVLWDLDNKPPRGPPYLAALALKNLAQKFGEIIEMSA 120

Query: 655 YANRHAFIHLPQWVREERSQRKQVDILERKGMITPSEPYVCNVCGRKCRTNLDLKKHFKQ 476
           YANRHAFIHLP WV +ER +RKQ+DILERKG++  ++PY+C VCGRKC+TN++LKKHFKQ
Sbjct: 121 YANRHAFIHLPNWVLQERRERKQLDILERKGLVNQTDPYICGVCGRKCKTNMELKKHFKQ 180

Query: 475 LHEREREKKLSRMRSLKGKKRQKYKERFISGNTKYEEGARNLLSPKVGYGLASELRRAGV 296
           LHERER+KKL+RMRSLKGKKRQ++KERFISGN KY E A+ LL+PKVGYGLA EL+RAGV
Sbjct: 181 LHERERQKKLNRMRSLKGKKRQRFKERFISGNHKYNEEAKKLLTPKVGYGLAQELKRAGV 240

Query: 295 FVKMVEDKPQSADRALKRQMQHSMSRGIDWMFLVTDDSDFSDMLRSARESNLQTVVVGDS 116
           +VK V+DKPQ+AD ALKRQ++HSMSRG+DW+FL++DDSDFSD+LR ARE+NL TVVVGD 
Sbjct: 241 YVKTVQDKPQAADWALKRQIEHSMSRGVDWLFLISDDSDFSDILRRAREANLGTVVVGDR 300

Query: 115 DRALGRNADLWVPWLRVENGEIGEEEL-FSARTERDEF 5
           DRALGR+ADLWVPW+ VENGE+ E +L   +R E + F
Sbjct: 301 DRALGRHADLWVPWIGVENGEVTENDLVLKSRIESENF 338


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