BLASTX nr result

ID: Coptis24_contig00015153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015153
         (1152 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150568.1| PREDICTED: uncharacterized protein PAM68-lik...   173   8e-41
ref|XP_002274943.1| PREDICTED: uncharacterized LOC100266405 [Vit...   173   8e-41
ref|XP_002513644.1| conserved hypothetical protein [Ricinus comm...   150   4e-34
ref|NP_001239781.1| uncharacterized protein LOC100782877 [Glycin...   149   2e-33
ref|XP_002305939.1| predicted protein [Populus trichocarpa] gi|1...   147   6e-33

>ref|XP_004150568.1| PREDICTED: uncharacterized protein PAM68-like [Cucumis sativus]
           gi|449525666|ref|XP_004169837.1| PREDICTED:
           uncharacterized protein PAM68-like [Cucumis sativus]
          Length = 180

 Score =  173 bits (438), Expect = 8e-41
 Identities = 88/166 (53%), Positives = 113/166 (68%)
 Frame = -3

Query: 964 KRNSFLQPTVTSNPLDPASTNNSTWKLQAEAKGFGKESTTVSKRGSQNNITSKQTNSNND 785
           +R   +  +  +N L   +   S  ++Q  AKGF     T S R ++N  T+ Q  +NN+
Sbjct: 22  QRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGF-----TNSPRTAKNRETTAQ--NNNE 74

Query: 784 DDDGKIPQVVWDRMIVRILFYVGIPMATGIALLCIFSVLKELKILDVPAWIPFLTTLLAF 605
           DDD +IP+ V+ R+I RIL +VGIPMA G+ LL IF  +KE  + DVP W+PF TT L F
Sbjct: 75  DDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTF 134

Query: 604 GTSTLGIAYGTLSTSLDPKNKGSVLGWEEVQQNWPEMWREEDENRR 467
           G ST+GIAYGTLSTSLDP+ KGSVLGWEE Q+NW EMW+EEDE RR
Sbjct: 135 GASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEEDEGRR 180


>ref|XP_002274943.1| PREDICTED: uncharacterized LOC100266405 [Vitis vinifera]
           gi|302143781|emb|CBI22642.3| unnamed protein product
           [Vitis vinifera]
          Length = 178

 Score =  173 bits (438), Expect = 8e-41
 Identities = 85/140 (60%), Positives = 104/140 (74%), Gaps = 2/140 (1%)
 Frame = -3

Query: 895 TWKLQAEAKGFGKESTTVSKRGSQNNITSKQTNSNN--DDDDGKIPQVVWDRMIVRILFY 722
           TWKL AEAKGFG    T+ ++ +    T  + NS N  DDDD KIPQVV+DRMIVRILF+
Sbjct: 39  TWKLHAEAKGFGVAPGTILEKKTAQKETVPRKNSGNGDDDDDEKIPQVVFDRMIVRILFF 98

Query: 721 VGIPMATGIALLCIFSVLKELKILDVPAWIPFLTTLLAFGTSTLGIAYGTLSTSLDPKNK 542
           VG PM  G+ALL +F  +K+  + DVP W+PFLTTL+AFG S LGIAYGTLSTS D + K
Sbjct: 99  VGAPMGIGVALLNLFGAVKDQHLWDVPVWLPFLTTLIAFGASALGIAYGTLSTSWDAEKK 158

Query: 541 GSVLGWEEVQQNWPEMWREE 482
           GS+LG EE QQNW ++W+EE
Sbjct: 159 GSLLGLEEAQQNWVDVWKEE 178


>ref|XP_002513644.1| conserved hypothetical protein [Ricinus communis]
            gi|223547552|gb|EEF49047.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 183

 Score =  150 bits (380), Expect = 4e-34
 Identities = 85/186 (45%), Positives = 114/186 (61%), Gaps = 2/186 (1%)
 Frame = -3

Query: 1024 MNTLIS-QRLPILYIKSS-QCVKRNSFLQPTVTSNPLDPASTNNSTWKLQAEAKGFGKES 851
            MN L+S QR P+   K S Q   +     PT+  +  +P++ +    +L A AKGF    
Sbjct: 1    MNALVSSQRSPLYLTKPSPQWKSKTPSHHPTIFRSQNNPSTRS----RLNANAKGFTSRK 56

Query: 850  TTVSKRGSQNNITSKQTNSNNDDDDGKIPQVVWDRMIVRILFYVGIPMATGIALLCIFSV 671
                 + +  +I +  +N +N  DD ++P+ V +R+I RIL  VG+PMA G+A L  F  
Sbjct: 57   PPHMIKENTLDIKTTTSNEHNGSDDEELPKEVVNRVIKRILVSVGVPMALGLAFLKFFGS 116

Query: 670  LKELKILDVPAWIPFLTTLLAFGTSTLGIAYGTLSTSLDPKNKGSVLGWEEVQQNWPEMW 491
            ++E  I DVP WI F TT L FGTS LGIAYG LS SLDP  KGS+LG+EEVQ+NW EMW
Sbjct: 117  VREQGIWDVPVWIVFATTFLTFGTSALGIAYGALSASLDPNKKGSLLGFEEVQENWVEMW 176

Query: 490  REEDEN 473
            +EED N
Sbjct: 177  KEEDGN 182


>ref|NP_001239781.1| uncharacterized protein LOC100782877 [Glycine max]
           gi|255638580|gb|ACU19597.1| unknown [Glycine max]
          Length = 183

 Score =  149 bits (375), Expect = 2e-33
 Identities = 76/144 (52%), Positives = 94/144 (65%), Gaps = 2/144 (1%)
 Frame = -3

Query: 898 STWKLQAEAKGFGKESTTVSKRGSQNNITSKQTNSNNDDDDGKIPQVVWDRMIVRILFYV 719
           +T K +A AKGF           + N         NNDDDD ++PQ V  R+I RILF V
Sbjct: 40  TTLKPRASAKGFSSTGPPTVASDNANTTKKPMRRKNNDDDDDELPQEVMYRLIGRILFSV 99

Query: 718 GIPMATGIALLCIFSVLKELKILDVPAWIPFLTTLLAFGTSTLGIAYGTLSTSLDPKNKG 539
           G+PM  G+ALL +F  LKE  + D P W+PFLTTLL FG S+LGIAYG LSTSLD + +G
Sbjct: 100 GVPMGLGLALLGLFGELKEKHVWDAPLWLPFLTTLLTFGASSLGIAYGALSTSLDAEKEG 159

Query: 538 SVLGWEEVQQNWPEMWRE--EDEN 473
           S LG E++Q+NW EMW+E  EDEN
Sbjct: 160 SFLGVEQLQKNWVEMWQEKQEDEN 183


>ref|XP_002305939.1| predicted protein [Populus trichocarpa] gi|118488155|gb|ABK95897.1|
            unknown [Populus trichocarpa] gi|222848903|gb|EEE86450.1|
            predicted protein [Populus trichocarpa]
          Length = 182

 Score =  147 bits (370), Expect = 6e-33
 Identities = 80/189 (42%), Positives = 113/189 (59%), Gaps = 1/189 (0%)
 Frame = -3

Query: 1024 MNTLISQRLPILYIKSSQCVKRNSFLQPTVTSNPLDPASTNN-STWKLQAEAKGFGKEST 848
            MNTL+  +   LY+ +S   K    + P++    +     N  +TWK+QA AKGFG    
Sbjct: 1    MNTLVCSQKSPLYLANSSPWKP---MAPSILPTSIQKTLNNPPATWKVQASAKGFGSAPP 57

Query: 847  TVSKRGSQNNITSKQTNSNNDDDDGKIPQVVWDRMIVRILFYVGIPMATGIALLCIFSVL 668
            ++ +   +   TSK TN+N+D++   IP+ V  R+I R+L  VG PMA   A + +  ++
Sbjct: 58   SIQESSIKK--TSKNTNNNDDEE---IPEEVLYRIIKRVLVSVGAPMALAFASMNVIGLV 112

Query: 667  KELKILDVPAWIPFLTTLLAFGTSTLGIAYGTLSTSLDPKNKGSVLGWEEVQQNWPEMWR 488
             E  I +VP W  FLT  L  G S  GIAYG LSTS+DP  KGS LG+E+VQ+NW EMW+
Sbjct: 113  MEQHIWNVPKWFMFLTLFLTLGASVCGIAYGALSTSMDPNEKGSFLGFEQVQKNWVEMWK 172

Query: 487  EEDENRR*W 461
            EEDE ++ W
Sbjct: 173  EEDEGKKSW 181


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