BLASTX nr result

ID: Coptis24_contig00015152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015152
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546118.1| PREDICTED: BI1-like protein-like [Glycine max]     64   2e-08
gb|ACU19337.1| unknown [Glycine max]                                   64   2e-08
ref|NP_001237753.1| uncharacterized protein LOC100499906 [Glycin...    64   2e-08
ref|XP_002312729.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
gb|AFK46458.1| unknown [Medicago truncatula]                           62   5e-08

>ref|XP_003546118.1| PREDICTED: BI1-like protein-like [Glycine max]
          Length = 246

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/63 (52%), Positives = 40/63 (63%)
 Frame = -1

Query: 190 KEMYNTYSSVKVDLEAGGTTLFPGLSHAENDLRWGFIRKVYGILSAQIXXXXXXXXXXXL 11
           +++Y    + + DLE+G  TL+PGLS  EN LRWGFIRKVYGILSAQI            
Sbjct: 5   QQLYTRAKTEEFDLESG-ETLYPGLSVGENQLRWGFIRKVYGILSAQIVLTTLVSVTTVF 63

Query: 10  YTP 2
           YTP
Sbjct: 64  YTP 66


>gb|ACU19337.1| unknown [Glycine max]
          Length = 246

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/63 (52%), Positives = 40/63 (63%)
 Frame = -1

Query: 190 KEMYNTYSSVKVDLEAGGTTLFPGLSHAENDLRWGFIRKVYGILSAQIXXXXXXXXXXXL 11
           +++Y    + + DLE+G  TL+PGLS  EN LRWGFIRKVYGILSAQI            
Sbjct: 5   QQLYTRAKTEEFDLESG-ETLYPGLSVGENQLRWGFIRKVYGILSAQIVLTTLVSVTAVF 63

Query: 10  YTP 2
           YTP
Sbjct: 64  YTP 66


>ref|NP_001237753.1| uncharacterized protein LOC100499906 [Glycine max]
           gi|255627565|gb|ACU14127.1| unknown [Glycine max]
          Length = 246

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/63 (52%), Positives = 40/63 (63%)
 Frame = -1

Query: 190 KEMYNTYSSVKVDLEAGGTTLFPGLSHAENDLRWGFIRKVYGILSAQIXXXXXXXXXXXL 11
           +++Y    + + DLE+G  TL+PGLS  EN LRWGFIRKVYGILSAQI            
Sbjct: 5   QQLYTRAKTEEFDLESG-ETLYPGLSVGENQLRWGFIRKVYGILSAQIVLTTLVSVTTVF 63

Query: 10  YTP 2
           YTP
Sbjct: 64  YTP 66


>ref|XP_002312729.1| predicted protein [Populus trichocarpa] gi|222852549|gb|EEE90096.1|
           predicted protein [Populus trichocarpa]
          Length = 252

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 39/70 (55%), Positives = 44/70 (62%), Gaps = 8/70 (11%)
 Frame = -1

Query: 187 EMYNTYSSV-------KVDLEAG-GTTLFPGLSHAENDLRWGFIRKVYGILSAQIXXXXX 32
           EM+  YSSV       +VDLEAG G TL+PGLS  EN LRWG IRKVYGIL+AQ+     
Sbjct: 4   EMFG-YSSVSNKDAGKEVDLEAGNGETLYPGLSLGENQLRWGLIRKVYGILAAQLILTTI 62

Query: 31  XXXXXXLYTP 2
                 LYTP
Sbjct: 63  VAAATVLYTP 72


>gb|AFK46458.1| unknown [Medicago truncatula]
          Length = 257

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/62 (56%), Positives = 40/62 (64%), Gaps = 5/62 (8%)
 Frame = -1

Query: 172 YSSVK-----VDLEAGGTTLFPGLSHAENDLRWGFIRKVYGILSAQIXXXXXXXXXXXLY 8
           Y+SVK     +D+E+G  TL+PGLS  EN LRWGFIRKVYGILSAQI            Y
Sbjct: 17  YTSVKRDEAELDIESG-ETLYPGLSLGENQLRWGFIRKVYGILSAQILLTTIVSVITVFY 75

Query: 7   TP 2
           TP
Sbjct: 76  TP 77


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