BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015150
         (1069 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containi...   166   7e-39
emb|CBI28142.3| unnamed protein product [Vitis vinifera]              166   7e-39
ref|XP_002529360.1| pentatricopeptide repeat-containing protein,...   145   2e-32
ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containi...   136   1e-29
ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containi...   135   2e-29

>ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein At1g31430-like
            [Vitis vinifera]
          Length = 662

 Score =  166 bits (421), Expect = 7e-39
 Identities = 76/128 (59%), Positives = 100/128 (78%)
 Frame = -2

Query: 1068 PNFSDDVLLPLWSSLLGACRIHRNVHMGERVARRILGMESSNSGIHSLAANLYAAADRWE 889
            PN +++V++PL+ +LL ACR H NV MGERVA+R++G+ES +S +H+L AN+YA+ADRWE
Sbjct: 529  PNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYASADRWE 588

Query: 888  DVTKVRRKMKDLGIKKTPGCSSIEVNGVFHEFLVADSSHPKARESYAXXXXXXXXXLSSQ 709
            DVTKVRRKMKDLG+KK PGCSS+EVNG+ HEFLV D+SHP+ RE Y+         L   
Sbjct: 589  DVTKVRRKMKDLGVKKVPGCSSVEVNGIVHEFLVGDASHPEMREIYSMLDSIAKPLLGLD 648

Query: 708  ENVIDGSI 685
            EN ++G I
Sbjct: 649  ENEMEGEI 656


>emb|CBI28142.3| unnamed protein product [Vitis vinifera]
          Length = 571

 Score =  166 bits (421), Expect = 7e-39
 Identities = 76/128 (59%), Positives = 100/128 (78%)
 Frame = -2

Query: 1068 PNFSDDVLLPLWSSLLGACRIHRNVHMGERVARRILGMESSNSGIHSLAANLYAAADRWE 889
            PN +++V++PL+ +LL ACR H NV MGERVA+R++G+ES +S +H+L AN+YA+ADRWE
Sbjct: 438  PNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYASADRWE 497

Query: 888  DVTKVRRKMKDLGIKKTPGCSSIEVNGVFHEFLVADSSHPKARESYAXXXXXXXXXLSSQ 709
            DVTKVRRKMKDLG+KK PGCSS+EVNG+ HEFLV D+SHP+ RE Y+         L   
Sbjct: 498  DVTKVRRKMKDLGVKKVPGCSSVEVNGIVHEFLVGDASHPEMREIYSMLDSIAKPLLGLD 557

Query: 708  ENVIDGSI 685
            EN ++G I
Sbjct: 558  ENEMEGEI 565


>ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223531180|gb|EEF33027.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 683

 Score =  145 bits (365), Expect = 2e-32
 Identities = 70/126 (55%), Positives = 91/126 (72%)
 Frame = -2

Query: 1068 PNFSDDVLLPLWSSLLGACRIHRNVHMGERVARRILGMESSNSGIHSLAANLYAAADRWE 889
            P+ +  + +PL+ SLL ACRI+ NV MGERVA++++  ESS+S +H+L AN+YA ADRWE
Sbjct: 534  PDENKAITVPLYGSLLSACRIYGNVEMGERVAKQLVKFESSDSSVHTLLANIYAFADRWE 593

Query: 888  DVTKVRRKMKDLGIKKTPGCSSIEVNGVFHEFLVADSSHPKARESYAXXXXXXXXXLSSQ 709
            DVTKVRRKMKDLG+KKTPGCSSIEV+ + HEF     SHP+ RE Y          L S 
Sbjct: 594  DVTKVRRKMKDLGVKKTPGCSSIEVDSIIHEFFSGHPSHPEMREIYYMLNIMAKPLLGSA 653

Query: 708  ENVIDG 691
            +N ++G
Sbjct: 654  KNEMEG 659


>ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31430-like
            [Cucumis sativus]
          Length = 781

 Score =  136 bits (342), Expect = 1e-29
 Identities = 60/99 (60%), Positives = 80/99 (80%)
 Frame = -2

Query: 1053 DVLLPLWSSLLGACRIHRNVHMGERVARRILGMESSNSGIHSLAANLYAAADRWEDVTKV 874
            ++++PL+ +LL ACRIH NV MGER+A+++  +ES +S IH+L AN+YA+ DRWED  KV
Sbjct: 645  EIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKV 704

Query: 873  RRKMKDLGIKKTPGCSSIEVNGVFHEFLVADSSHPKARE 757
            RRKMK+LG+KK PGCS IEV+G+ HEFLV D SHP+  E
Sbjct: 705  RRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMME 743


>ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
            At1g31430-like, partial [Cucumis sativus]
          Length = 735

 Score =  135 bits (340), Expect = 2e-29
 Identities = 60/99 (60%), Positives = 80/99 (80%)
 Frame = -2

Query: 1053 DVLLPLWSSLLGACRIHRNVHMGERVARRILGMESSNSGIHSLAANLYAAADRWEDVTKV 874
            ++++PL+ +LL ACRIH NV MGER+A+++  +ES +S IH+L AN+YA+ DRWED  KV
Sbjct: 599  EIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKV 658

Query: 873  RRKMKDLGIKKTPGCSSIEVNGVFHEFLVADSSHPKARE 757
            RRKMK+LG+KK PGCS IEV+G+ HEFLV D SHP+  E
Sbjct: 659  RRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMIE 697