BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015143
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284998.1| PREDICTED: F-box protein At1g47056 [Vitis vi...    85   7e-15
ref|XP_002510165.1| skip-2, putative [Ricinus communis] gi|22355...    72   5e-11
ref|XP_002327176.1| f-box family protein [Populus trichocarpa] g...    69   4e-10
ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cuc...    69   5e-10
ref|XP_003544473.1| PREDICTED: F-box protein At1g47056-like [Gly...    68   7e-10

>ref|XP_002284998.1| PREDICTED: F-box protein At1g47056 [Vitis vinifera]
          Length = 541

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 40/76 (52%), Positives = 55/76 (72%)
 Frame = +3

Query: 3   NLDTGASDIPEDIAGEGGLEENVVEIPPAASQSTAADMVSSSNGRSPLYKVKLGFFAGRN 182
           NLDTG ++  +  A +GG +EN VE+PP ASQ+ AA++ SSS+GRS   K +LG   GRN
Sbjct: 459 NLDTGETEHQDASASDGGAQENAVELPPLASQNGAANIASSSSGRSNSLKARLGLLTGRN 518

Query: 183 FVASTFRKWSSSNNGT 230
            VAST R+W+SSN+ +
Sbjct: 519 LVASTLRRWTSSNSSS 534


>ref|XP_002510165.1| skip-2, putative [Ricinus communis] gi|223550866|gb|EEF52352.1|
           skip-2, putative [Ricinus communis]
          Length = 536

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 36/79 (45%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
 Frame = +3

Query: 3   NLDTGASDIPEDIAGEGGLEENVVEIPPAASQSTAADMVSSSN-GRSPLYKVKLGFFAGR 179
           NLD+G  +  +  A +GG++EN VEIPP    +    + SSS  GRS  +K +LG  +GR
Sbjct: 458 NLDSGEHEHHDASASDGGVQENAVEIPPGQIAAVVPSVASSSTAGRSTSFKSRLGLLSGR 517

Query: 180 NFVASTFRKWSSSNNGTNS 236
           N VA T R+WSS N G+ S
Sbjct: 518 NLVACTLRRWSSGNTGSRS 536


>ref|XP_002327176.1| f-box family protein [Populus trichocarpa]
           gi|222835491|gb|EEE73926.1| f-box family protein
           [Populus trichocarpa]
          Length = 534

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/76 (44%), Positives = 46/76 (60%)
 Frame = +3

Query: 3   NLDTGASDIPEDIAGEGGLEENVVEIPPAASQSTAADMVSSSNGRSPLYKVKLGFFAGRN 182
           NLD G  +  +  A +GGL ENVVE    A+Q     + SSS GRS  +K +LG  +G+N
Sbjct: 457 NLDCGEPEHQDASASDGGLLENVVEFHSVANQMPLPSIASSSTGRSTSFKSRLGLLSGKN 516

Query: 183 FVASTFRKWSSSNNGT 230
            VA TFR+WS  N+ +
Sbjct: 517 LVACTFRRWSGGNSSS 532


>ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cucumis sativus]
           gi|449515093|ref|XP_004164584.1| PREDICTED: F-box
           protein At1g47056-like [Cucumis sativus]
          Length = 535

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/76 (43%), Positives = 46/76 (60%)
 Frame = +3

Query: 3   NLDTGASDIPEDIAGEGGLEENVVEIPPAASQSTAADMVSSSNGRSPLYKVKLGFFAGRN 182
           NLD+G  + P+  A EGG+++NVV+  P  +Q     + SSS GRS   K +LG  AGR 
Sbjct: 456 NLDSGEPEHPDASASEGGIQDNVVDFHPIPNQVVPPTIASSSAGRSSSLKSRLGLLAGRG 515

Query: 183 FVASTFRKWSSSNNGT 230
            VA T R+WS  N+ +
Sbjct: 516 LVACTLRRWSGGNSSS 531


>ref|XP_003544473.1| PREDICTED: F-box protein At1g47056-like [Glycine max]
          Length = 549

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
 Frame = +3

Query: 3   NLDTGASDIPEDIAGEGGLEENVVEIPPAASQSTAADM-VSSSNGRSPLYKVKLGFFAGR 179
           NLDTG +++ E  A +GG ++NVVE P   +Q  AA    SSS  RS  +K++LG  +GR
Sbjct: 470 NLDTGEAELQEASASDGGAQDNVVEFPQMPAQIVAAAASASSSTTRSSSFKLRLGLLSGR 529

Query: 180 NFVASTFRKWSSSN 221
           + VASTF++WS  +
Sbjct: 530 SLVASTFKRWSGGS 543