BLASTX nr result

ID: Coptis24_contig00015135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015135
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545914.1| PREDICTED: chitobiosyldiphosphodolichol beta...   196   2e-48
gb|AFK48851.1| unknown [Medicago truncatula]                          193   1e-47
gb|ACJ85437.1| unknown [Medicago truncatula]                          193   1e-47
emb|CBI19390.3| unnamed protein product [Vitis vinifera]              192   2e-47
ref|XP_002330745.1| predicted protein [Populus trichocarpa] gi|2...   191   5e-47

>ref|XP_003545914.1| PREDICTED: chitobiosyldiphosphodolichol
           beta-mannosyltransferase-like [Glycine max]
          Length = 521

 Score =  196 bits (498), Expect = 2e-48
 Identities = 93/111 (83%), Positives = 103/111 (92%)
 Frame = -3

Query: 557 DLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIQELVKVEKNGLLFSSPSELADEL 378
           DLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI+ELV+V+KNGLLFSS SELADEL
Sbjct: 378 DLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIRELVRVDKNGLLFSSSSELADEL 437

Query: 377 LMLFKGFPDECTALKLLREGALETGSSSRWATEWEEHTKPLLSEVISRHYN 225
           L+LFKGFPD+C ALK+L+ GALETGSSSRWATEWEEH KPL++E  S  Y+
Sbjct: 438 LLLFKGFPDDCDALKVLKYGALETGSSSRWATEWEEHAKPLITEASSFFYS 488


>gb|AFK48851.1| unknown [Medicago truncatula]
          Length = 484

 Score =  193 bits (491), Expect = 1e-47
 Identities = 91/108 (84%), Positives = 101/108 (93%)
 Frame = -3

Query: 557 DLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIQELVKVEKNGLLFSSPSELADEL 378
           DLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI+ELV V+KNGLLFSS SELADEL
Sbjct: 376 DLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIKELVSVDKNGLLFSSSSELADEL 435

Query: 377 LMLFKGFPDECTALKLLREGALETGSSSRWATEWEEHTKPLLSEVISR 234
           L LFKGFP+EC +LK+L+ GAL+TG+SSRW TEWEEH KPL++EVISR
Sbjct: 436 LTLFKGFPNECDSLKVLKSGALDTGASSRWVTEWEEHAKPLITEVISR 483


>gb|ACJ85437.1| unknown [Medicago truncatula]
          Length = 239

 Score =  193 bits (491), Expect = 1e-47
 Identities = 91/108 (84%), Positives = 101/108 (93%)
 Frame = -3

Query: 557 DLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIQELVKVEKNGLLFSSPSELADEL 378
           DLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI+ELV V+KNGLLFSS SELADEL
Sbjct: 131 DLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIKELVSVDKNGLLFSSSSELADEL 190

Query: 377 LMLFKGFPDECTALKLLREGALETGSSSRWATEWEEHTKPLLSEVISR 234
           L LFKGFP+EC +LK+L+ GAL+TG+SSRW TEWEEH KPL++EVISR
Sbjct: 191 LTLFKGFPNECDSLKVLKSGALDTGASSRWVTEWEEHAKPLITEVISR 238


>emb|CBI19390.3| unnamed protein product [Vitis vinifera]
          Length = 484

 Score =  192 bits (489), Expect = 2e-47
 Identities = 91/109 (83%), Positives = 98/109 (89%)
 Frame = -3

Query: 557 DLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIQELVKVEKNGLLFSSPSELADEL 378
           DLG+CLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI+ELVKVEKNGLLFSS SELA+EL
Sbjct: 374 DLGICLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVEKNGLLFSSSSELANEL 433

Query: 377 LMLFKGFPDECTALKLLREGALETGSSSRWATEWEEHTKPLLSEVISRH 231
           LMLFKGFPD C ALKLLR G +E G S+RW TEWE H KPL+S+VIS H
Sbjct: 434 LMLFKGFPDNCDALKLLRNGVVEAGFSARWDTEWERHAKPLISKVISEH 482


>ref|XP_002330745.1| predicted protein [Populus trichocarpa] gi|222872521|gb|EEF09652.1|
           predicted protein [Populus trichocarpa]
          Length = 481

 Score =  191 bits (486), Expect = 5e-47
 Identities = 94/104 (90%), Positives = 98/104 (94%)
 Frame = -3

Query: 557 DLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIQELVKVEKNGLLFSSPSELADEL 378
           DLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV+YSCI+ELVKVEKNGLLFSS SELADEL
Sbjct: 365 DLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVAYSCIKELVKVEKNGLLFSSSSELADEL 424

Query: 377 LMLFKGFPDECTALKLLREGALETGSSSRWATEWEEHTKPLLSE 246
           LMLFKGFP+EC ALKLLR GALE G SSRWATEWEEH KPL+SE
Sbjct: 425 LMLFKGFPEECDALKLLRNGALEMG-SSRWATEWEEHAKPLISE 467


Top