BLASTX nr result

ID: Coptis24_contig00015128 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015128
         (1323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320958.1| predicted protein [Populus trichocarpa] gi|2...   594   e-167
ref|XP_002515233.1| conserved hypothetical protein [Ricinus comm...   580   e-163
ref|XP_002301531.1| predicted protein [Populus trichocarpa] gi|2...   575   e-161
gb|ACA04033.1| galactinol synthase 4 [Populus trichocarpa x Popu...   574   e-161
ref|XP_002279114.2| PREDICTED: glycogenin-1 isoform 1 [Vitis vin...   565   e-159

>ref|XP_002320958.1| predicted protein [Populus trichocarpa] gi|222861731|gb|EEE99273.1|
            predicted protein [Populus trichocarpa]
          Length = 336

 Score =  594 bits (1532), Expect = e-167
 Identities = 281/338 (83%), Positives = 305/338 (90%)
 Frame = +2

Query: 95   MAPNIVSAATKNLGFTKQGSLPSKAFVTFLAGNGDYVKGVVGLAKGLRKVKSSYPLVVAI 274
            MAP +V AA K  GFTK  SLPS+A+VTFLAGNGDYVKGVVGLAKGLRKVK++YPL+VA+
Sbjct: 1    MAPELVQAALKPAGFTKPASLPSRAYVTFLAGNGDYVKGVVGLAKGLRKVKTAYPLIVAV 60

Query: 275  LPDVPEEHRRILETQGCIVHEIEPVYPPANQTQFAMAYYVINYSKLRIWEFVEYSKMIYL 454
            LPDVPEEHRRILE+QGCIV EIEPVYPP NQTQFAMAYYVINYSKLRIWEFVEYSKMIYL
Sbjct: 61   LPDVPEEHRRILESQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYL 120

Query: 455  DGDIQVFENIDHLFDLPDGHFYAVMDCFCEKTWSHTPQYKIGYCQQCPNKVNWPAEMGQP 634
            DGDIQV++NIDHLFDLPDGHFYAVMDCFCEKTWSHTPQYKIGYCQQCP+KVNWPAEMGQP
Sbjct: 121  DGDIQVYDNIDHLFDLPDGHFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVNWPAEMGQP 180

Query: 635  PALYFNAGMFVFEPSLSTYDDLLNACKSTPPTPFAEQDLLNVFFKDIYKPIPLVYNLVLA 814
            P+LYFNAGMFVFEPS+STY DLL   K TPPTPFAEQD LN++FKDIYKPIPLVYNLVLA
Sbjct: 181  PSLYFNAGMFVFEPSISTYHDLLKTLKVTPPTPFAEQDFLNMYFKDIYKPIPLVYNLVLA 240

Query: 815  MLWRHPENVHLEKVKVVHYCAAGSKPWRFTGKEENMDREDIKMLVKNWWDIYNDESLDYK 994
            MLWRHP+NV L+KVKVVHYCAAGSKPWR+TGKEENM REDIKMLV+ WW IYNDESLDY 
Sbjct: 241  MLWRHPDNVELDKVKVVHYCAAGSKPWRYTGKEENMQREDIKMLVEKWWGIYNDESLDYM 300

Query: 995  KPVDIGSTLERVDTPVPTLLAALSEAGVVNYVSAPSAA 1108
            K V  G   E V+  + + +AALSEAG V YV+APSAA
Sbjct: 301  KFVADGFDAEPVN--LQSFIAALSEAGAVQYVTAPSAA 336


>ref|XP_002515233.1| conserved hypothetical protein [Ricinus communis]
            gi|223545713|gb|EEF47217.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 336

 Score =  580 bits (1495), Expect = e-163
 Identities = 270/338 (79%), Positives = 302/338 (89%)
 Frame = +2

Query: 95   MAPNIVSAATKNLGFTKQGSLPSKAFVTFLAGNGDYVKGVVGLAKGLRKVKSSYPLVVAI 274
            MAP +V AA K   FTK  +LPS+A+VTFLAGNGDY+KGVVGLAKGLRKVK++YPLVVA+
Sbjct: 1    MAPELVHAALKPASFTKPPTLPSRAYVTFLAGNGDYIKGVVGLAKGLRKVKTAYPLVVAV 60

Query: 275  LPDVPEEHRRILETQGCIVHEIEPVYPPANQTQFAMAYYVINYSKLRIWEFVEYSKMIYL 454
            LPDVPEEHR+ILE+QGCIV EIEPVYPP NQTQFAMAYYVINYSKLRIWEFVEYSKMIYL
Sbjct: 61   LPDVPEEHRKILESQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYL 120

Query: 455  DGDIQVFENIDHLFDLPDGHFYAVMDCFCEKTWSHTPQYKIGYCQQCPNKVNWPAEMGQP 634
            DGDIQVF+NIDHLFDLPDGHFYAVMDCFCEKTWSHTPQYKIGYCQQCP++V WPA++GQP
Sbjct: 121  DGDIQVFDNIDHLFDLPDGHFYAVMDCFCEKTWSHTPQYKIGYCQQCPDRVKWPAKLGQP 180

Query: 635  PALYFNAGMFVFEPSLSTYDDLLNACKSTPPTPFAEQDLLNVFFKDIYKPIPLVYNLVLA 814
            P+LYFNAGMFVFEPS+STY DLL   + TPPTPFAEQD LN++F+DIYKPIP+VYNLVLA
Sbjct: 181  PSLYFNAGMFVFEPSISTYHDLLKTVQITPPTPFAEQDFLNMYFRDIYKPIPVVYNLVLA 240

Query: 815  MLWRHPENVHLEKVKVVHYCAAGSKPWRFTGKEENMDREDIKMLVKNWWDIYNDESLDYK 994
            MLWRHPENV L+KVKVVHYCAAGSKPWR+TGKEENM+REDIKM+VK WWD+YNDESLDYK
Sbjct: 241  MLWRHPENVELDKVKVVHYCAAGSKPWRYTGKEENMEREDIKMVVKKWWDVYNDESLDYK 300

Query: 995  KPVDIGSTLERVDTPVPTLLAALSEAGVVNYVSAPSAA 1108
            K        E ++  +   +AAL EAG V YV+APSAA
Sbjct: 301  KQPAADGDAEPMN--LQPFIAALYEAGAVQYVTAPSAA 336


>ref|XP_002301531.1| predicted protein [Populus trichocarpa] gi|222843257|gb|EEE80804.1|
            predicted protein [Populus trichocarpa]
          Length = 337

 Score =  575 bits (1481), Expect = e-161
 Identities = 272/338 (80%), Positives = 299/338 (88%)
 Frame = +2

Query: 95   MAPNIVSAATKNLGFTKQGSLPSKAFVTFLAGNGDYVKGVVGLAKGLRKVKSSYPLVVAI 274
            MAP +V +A K  GFTK  SLPS+A+VTFLAG+GDYVKGVVGLAKGLRKVK++YPL+VA+
Sbjct: 1    MAPELVRSALKPAGFTKLASLPSRAYVTFLAGDGDYVKGVVGLAKGLRKVKTAYPLIVAV 60

Query: 275  LPDVPEEHRRILETQGCIVHEIEPVYPPANQTQFAMAYYVINYSKLRIWEFVEYSKMIYL 454
            LPDVPEEHR+ILE+QGCIV EIEPVYPP NQTQFAMAYYVINYSKLRIWEFVEYSKMIYL
Sbjct: 61   LPDVPEEHRQILESQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYL 120

Query: 455  DGDIQVFENIDHLFDLPDGHFYAVMDCFCEKTWSHTPQYKIGYCQQCPNKVNWPAEMGQP 634
            DGDIQV++NIDHLFDLPDG FYAVMDCFCEKTWSHTPQYKIGYCQQCP+KVNWPAEMGQP
Sbjct: 121  DGDIQVYDNIDHLFDLPDGRFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVNWPAEMGQP 180

Query: 635  PALYFNAGMFVFEPSLSTYDDLLNACKSTPPTPFAEQDLLNVFFKDIYKPIPLVYNLVLA 814
            P+ YFNAGM VFEPS++TY DLL   K TPPTPFAEQD LN++FKDIY PIPLVYNLVLA
Sbjct: 181  PSPYFNAGMCVFEPSIATYHDLLKTLKVTPPTPFAEQDFLNMYFKDIYTPIPLVYNLVLA 240

Query: 815  MLWRHPENVHLEKVKVVHYCAAGSKPWRFTGKEENMDREDIKMLVKNWWDIYNDESLDYK 994
            MLWRHPENV L++VKVVHYCAAGSKPWR+TGKEENM REDIKMLVK WWDIY+DESLD K
Sbjct: 241  MLWRHPENVELDRVKVVHYCAAGSKPWRYTGKEENMQREDIKMLVKKWWDIYSDESLDSK 300

Query: 995  KPVDIGSTLERVDTPVPTLLAALSEAGVVNYVSAPSAA 1108
            K V    T +     +   +AALSEAG V YV+APSAA
Sbjct: 301  KLV-ADCTTDAEPVNLQPFIAALSEAGAVQYVTAPSAA 337


>gb|ACA04033.1| galactinol synthase 4 [Populus trichocarpa x Populus deltoides]
          Length = 337

 Score =  574 bits (1480), Expect = e-161
 Identities = 272/338 (80%), Positives = 299/338 (88%)
 Frame = +2

Query: 95   MAPNIVSAATKNLGFTKQGSLPSKAFVTFLAGNGDYVKGVVGLAKGLRKVKSSYPLVVAI 274
            MAP +V +A K  GFTK  SLPS+A+VTFLAG+GDYVKGVVGLAKGLRKVK++YPL+VA+
Sbjct: 1    MAPELVRSALKPAGFTKLASLPSRAYVTFLAGDGDYVKGVVGLAKGLRKVKTAYPLIVAV 60

Query: 275  LPDVPEEHRRILETQGCIVHEIEPVYPPANQTQFAMAYYVINYSKLRIWEFVEYSKMIYL 454
            LPDVPEEHR+ILE+QGCIV EIEPVYPP NQTQFAMAYYVINYSKLRIWEFVEYSKMIYL
Sbjct: 61   LPDVPEEHRQILESQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYL 120

Query: 455  DGDIQVFENIDHLFDLPDGHFYAVMDCFCEKTWSHTPQYKIGYCQQCPNKVNWPAEMGQP 634
            DGDIQV++NIDHLFDLPDG FYAVMDCFCEKTWSHTPQYKIGYCQQCP+KVNWPAEMGQP
Sbjct: 121  DGDIQVYDNIDHLFDLPDGRFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVNWPAEMGQP 180

Query: 635  PALYFNAGMFVFEPSLSTYDDLLNACKSTPPTPFAEQDLLNVFFKDIYKPIPLVYNLVLA 814
            P+ YFNAGM VFEPS++TY DLL   K TPPTPFAEQD LN++FKDIY PIPLVYNLVLA
Sbjct: 181  PSPYFNAGMCVFEPSIATYHDLLKTLKVTPPTPFAEQDFLNMYFKDIYTPIPLVYNLVLA 240

Query: 815  MLWRHPENVHLEKVKVVHYCAAGSKPWRFTGKEENMDREDIKMLVKNWWDIYNDESLDYK 994
            MLWRHPENV L++VKVVHYCAAGSKPWR+TGKEENM REDIKMLVK WWDIY+DESLD K
Sbjct: 241  MLWRHPENVELDRVKVVHYCAAGSKPWRYTGKEENMQREDIKMLVKKWWDIYSDESLDSK 300

Query: 995  KPVDIGSTLERVDTPVPTLLAALSEAGVVNYVSAPSAA 1108
            K V    T +     +   +AALSEAG V YV+APSAA
Sbjct: 301  KLV-ADCTTDAEPVNLHPFIAALSEAGAVQYVTAPSAA 337


>ref|XP_002279114.2| PREDICTED: glycogenin-1 isoform 1 [Vitis vinifera]
          Length = 342

 Score =  565 bits (1457), Expect = e-159
 Identities = 268/342 (78%), Positives = 293/342 (85%), Gaps = 4/342 (1%)
 Frame = +2

Query: 95   MAPNIVSAATKNLGFTKQGSLPSKAFVTFLAGNGDYVKGVVGLAKGLRKVKSSYPLVVAI 274
            MAP I+SA+ K   F K  SLP +A+V FLAGNGDYVKGVVGLAKGLRKVKS+YPLVVA+
Sbjct: 1    MAPEIISASGKPSRFLKPASLPDRAYVAFLAGNGDYVKGVVGLAKGLRKVKSAYPLVVAV 60

Query: 275  LPDVPEEHRRILETQGCIVHEIEPVYPPANQTQFAMAYYVINYSKLRIWEFVEYSKMIYL 454
            LPDVP EHRR LE+QGCIV EIEPVYPP NQTQFAMAYYVINYSKLRIWEFVEYSKMIYL
Sbjct: 61   LPDVPVEHRRELESQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYL 120

Query: 455  DGDIQVFENIDHLFDLPDGHFYAVMDCFCEKTWSHTPQYKIGYCQQCPNKVNWPAEMGQP 634
            DGDIQV++NIDHLF+LPDGHFYAVMDCFCEKTWSHTPQYKIGYCQQCP KV WPAE+GQP
Sbjct: 121  DGDIQVYDNIDHLFELPDGHFYAVMDCFCEKTWSHTPQYKIGYCQQCPEKVQWPAELGQP 180

Query: 635  PALYFNAGMFVFEPSLSTYDDLLNACKSTPPTPFAEQDLLNVFFKDIYKPIPLVYNLVLA 814
            P+LYFNAGMFVFEPSLSTY+DLL   + TP TPFAEQD LN++F D+YKPIPLVYNLVLA
Sbjct: 181  PSLYFNAGMFVFEPSLSTYEDLLETLRITPATPFAEQDFLNMYFSDVYKPIPLVYNLVLA 240

Query: 815  MLWRHPENVHLEKVKVVHYCAAGSKPWRFTGKEENMDREDIKMLVKNWWDIYNDESLDYK 994
            MLWRHPENV L+KVKVVHYCAAGSKPWR+TGKE+NM REDIKMLV  WW+IYND+SLDYK
Sbjct: 241  MLWRHPENVELDKVKVVHYCAAGSKPWRYTGKEDNMQREDIKMLVNKWWEIYNDKSLDYK 300

Query: 995  K----PVDIGSTLERVDTPVPTLLAALSEAGVVNYVSAPSAA 1108
            K      D  S L      +   +AALSE G V +V APSAA
Sbjct: 301  KTRMMANDYSSVLPGEQVNLEPFIAALSEVGHVEFVRAPSAA 342


Top