BLASTX nr result

ID: Coptis24_contig00015114 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015114
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS00695.1| metal-nicotianamine transporter YSL6 [Arabidopsis...   146   2e-33
ref|NP_566806.1| putative metal-nicotianamine transporter YSL6 [...   146   2e-33
gb|AAM53283.1| unknown protein [Arabidopsis thaliana]                 146   2e-33
gb|AAM64930.1| unknown [Arabidopsis thaliana]                         146   2e-33
gb|ACL83357.2| yellow stripe-like protein 6.4 [Brassica juncea]       145   3e-33

>gb|AAS00695.1| metal-nicotianamine transporter YSL6 [Arabidopsis thaliana]
          Length = 677

 Score =  146 bits (368), Expect = 2e-33
 Identities = 75/104 (72%), Positives = 82/104 (78%), Gaps = 6/104 (5%)
 Frame = +3

Query: 96  EMGSEDEISEPLLVPSS------SEVEIPTWKEQITIRGLLASALLGTLFCVITHKLNLT 257
           E+    EISE LL P S      +E  +P WKEQITIRGL  SALLGTLFC+ITHKLNLT
Sbjct: 4   EIPRSAEISEALLPPESEKTVTATEEHVPEWKEQITIRGLTVSALLGTLFCIITHKLNLT 63

Query: 258 VGVIPSLNVAAGLLGFFLVKSWTTFLSKFGFSVNPFTRQENTVI 389
           VG+IPSLNVAAGLLGFF VKSWT FLSK GF+V PFT+QENTVI
Sbjct: 64  VGIIPSLNVAAGLLGFFFVKSWTGFLSKLGFTVKPFTKQENTVI 107


>ref|NP_566806.1| putative metal-nicotianamine transporter YSL6 [Arabidopsis
           thaliana] gi|160359042|sp|Q6R3K6.2|YSL6_ARATH RecName:
           Full=Probable metal-nicotianamine transporter YSL6;
           AltName: Full=Protein YELLOW STRIPE LIKE 6; Short=AtYSL6
           gi|9279625|dbj|BAB01083.1| unnamed protein product
           [Arabidopsis thaliana] gi|332643734|gb|AEE77255.1|
           putative metal-nicotianamine transporter YSL6
           [Arabidopsis thaliana]
          Length = 676

 Score =  146 bits (368), Expect = 2e-33
 Identities = 75/104 (72%), Positives = 82/104 (78%), Gaps = 6/104 (5%)
 Frame = +3

Query: 96  EMGSEDEISEPLLVPSS------SEVEIPTWKEQITIRGLLASALLGTLFCVITHKLNLT 257
           E+    EISE LL P S      +E  +P WKEQITIRGL  SALLGTLFC+ITHKLNLT
Sbjct: 4   EIPRSAEISEALLPPESEKTVTATEEHVPEWKEQITIRGLTVSALLGTLFCIITHKLNLT 63

Query: 258 VGVIPSLNVAAGLLGFFLVKSWTTFLSKFGFSVNPFTRQENTVI 389
           VG+IPSLNVAAGLLGFF VKSWT FLSK GF+V PFT+QENTVI
Sbjct: 64  VGIIPSLNVAAGLLGFFFVKSWTGFLSKLGFTVKPFTKQENTVI 107


>gb|AAM53283.1| unknown protein [Arabidopsis thaliana]
          Length = 676

 Score =  146 bits (368), Expect = 2e-33
 Identities = 75/104 (72%), Positives = 82/104 (78%), Gaps = 6/104 (5%)
 Frame = +3

Query: 96  EMGSEDEISEPLLVPSS------SEVEIPTWKEQITIRGLLASALLGTLFCVITHKLNLT 257
           E+    EISE LL P S      +E  +P WKEQITIRGL  SALLGTLFC+ITHKLNLT
Sbjct: 4   EIPRSAEISEALLPPESEKTVTATEEHVPEWKEQITIRGLTVSALLGTLFCIITHKLNLT 63

Query: 258 VGVIPSLNVAAGLLGFFLVKSWTTFLSKFGFSVNPFTRQENTVI 389
           VG+IPSLNVAAGLLGFF VKSWT FLSK GF+V PFT+QENTVI
Sbjct: 64  VGIIPSLNVAAGLLGFFFVKSWTGFLSKLGFTVKPFTKQENTVI 107


>gb|AAM64930.1| unknown [Arabidopsis thaliana]
          Length = 676

 Score =  146 bits (368), Expect = 2e-33
 Identities = 75/104 (72%), Positives = 82/104 (78%), Gaps = 6/104 (5%)
 Frame = +3

Query: 96  EMGSEDEISEPLLVPSS------SEVEIPTWKEQITIRGLLASALLGTLFCVITHKLNLT 257
           E+    EISE LL P S      +E  +P WKEQITIRGL  SALLGTLFC+ITHKLNLT
Sbjct: 4   EIPRSAEISEALLPPESEKTVTATEEHVPEWKEQITIRGLTVSALLGTLFCIITHKLNLT 63

Query: 258 VGVIPSLNVAAGLLGFFLVKSWTTFLSKFGFSVNPFTRQENTVI 389
           VG+IPSLNVAAGLLGFF VKSWT FLSK GF+V PFT+QENTVI
Sbjct: 64  VGIIPSLNVAAGLLGFFFVKSWTGFLSKLGFTVKPFTKQENTVI 107


>gb|ACL83357.2| yellow stripe-like protein 6.4 [Brassica juncea]
          Length = 678

 Score =  145 bits (366), Expect = 3e-33
 Identities = 73/107 (68%), Positives = 84/107 (78%), Gaps = 9/107 (8%)
 Frame = +3

Query: 96  EMGSEDEISEPLLVPSSSEV---------EIPTWKEQITIRGLLASALLGTLFCVITHKL 248
           E+ +  EISE LL+P  ++           +P WKEQITIRGL+ SALLGTLFC+ITHKL
Sbjct: 4   EIPTSPEISEALLLPEPNKTATVILDQDEHVPEWKEQITIRGLVVSALLGTLFCIITHKL 63

Query: 249 NLTVGVIPSLNVAAGLLGFFLVKSWTTFLSKFGFSVNPFTRQENTVI 389
           NLTVG+IPSLNVAAGLLGFF VKSWT FLSK GF+V PFT+QENTVI
Sbjct: 64  NLTVGIIPSLNVAAGLLGFFFVKSWTGFLSKLGFTVKPFTKQENTVI 110


Top