BLASTX nr result

ID: Coptis24_contig00015113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015113
         (1394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279636.1| PREDICTED: putative DNA-binding protein ESCA...   302   1e-79
ref|XP_002299584.1| predicted protein [Populus trichocarpa] gi|2...   296   7e-78
ref|XP_002281296.1| PREDICTED: putative DNA-binding protein ESCA...   295   2e-77
ref|XP_002511734.1| ESC, putative [Ricinus communis] gi|22354891...   295   3e-77
ref|XP_002303540.1| predicted protein [Populus trichocarpa] gi|2...   293   7e-77

>ref|XP_002279636.1| PREDICTED: putative DNA-binding protein ESCAROLA [Vitis vinifera]
           gi|147867329|emb|CAN81187.1| hypothetical protein
           VITISV_029906 [Vitis vinifera]
           gi|296089162|emb|CBI38865.3| unnamed protein product
           [Vitis vinifera]
          Length = 300

 Score =  302 bits (774), Expect = 1e-79
 Identities = 167/267 (62%), Positives = 184/267 (68%), Gaps = 5/267 (1%)
 Frame = -1

Query: 884 MDQVTASAHGHSLPPPFHTRDLQLXXXXXXXXXXXXXXXXXXXXXXXQNSEDDE-GNSGL 708
           MD VTA  HG  LPPPFHTRDLQL                        NSED++ G+S L
Sbjct: 1   MDPVTA--HGRPLPPPFHTRDLQL------------HHHHQYQHHPQANSEDEQSGSSSL 46

Query: 707 XXXXXXXXXXXXXXXDSQDM----VALSGGDSEITRRPRGRPAGSKNKPKPPIIITRDSA 540
                          ++  +       S GD EITRRPRGRPAGSKNKPKPPIIITRDSA
Sbjct: 47  NRAQKRDRDESNATNNTSPIDGKEFGTSSGDGEITRRPRGRPAGSKNKPKPPIIITRDSA 106

Query: 539 NALRAHVMEIANGCDVVDSVSAFARRRQRGICILSGSGTVTNVTLRQPAAPGAIVTLHGR 360
           NALR+HVMEIA GCD++DS++ FARRRQRGICILSGSGTVTNVTLRQPA+PGA+VTLHGR
Sbjct: 107 NALRSHVMEIATGCDIMDSLNTFARRRQRGICILSGSGTVTNVTLRQPASPGAVVTLHGR 166

Query: 359 FEILSLSGSFLPPPAPPSATGLTIYXXXXXXXXXXXXXXXXXXXXGPVVIMAASFGNAAY 180
           FEILSLSGSFLPPPAPP+A+GLTIY                    GPVVIMAASFGNAAY
Sbjct: 167 FEILSLSGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGPLLASGPVVIMAASFGNAAY 226

Query: 179 ERLPLEDEEPQLPMQSGGPLDSPGMVG 99
           ERLPLEDEEPQ+P+   GPL SPGMVG
Sbjct: 227 ERLPLEDEEPQVPIPGSGPLGSPGMVG 253


>ref|XP_002299584.1| predicted protein [Populus trichocarpa] gi|222846842|gb|EEE84389.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  296 bits (759), Expect = 7e-78
 Identities = 162/267 (60%), Positives = 185/267 (69%), Gaps = 5/267 (1%)
 Frame = -1

Query: 884 MDQVTASAHGHSLPPPFHTRDLQLXXXXXXXXXXXXXXXXXXXXXXXQNSEDDEG--NSG 711
           MD VTA  HGHSLPPPFHTRD QL                        NSED++   +SG
Sbjct: 1   MDPVTA--HGHSLPPPFHTRDFQLHQQQQQQHQFHHQQQQ--------NSEDEQSGSSSG 50

Query: 710 LXXXXXXXXXXXXXXXDS---QDMVALSGGDSEITRRPRGRPAGSKNKPKPPIIITRDSA 540
           L                +   Q+++    GD EITRRPRGRPAGSKNKPKPPIIITRDSA
Sbjct: 51  LNKSLKRERDESNNSMGNREGQELITSGDGDGEITRRPRGRPAGSKNKPKPPIIITRDSA 110

Query: 539 NALRAHVMEIANGCDVVDSVSAFARRRQRGICILSGSGTVTNVTLRQPAAPGAIVTLHGR 360
           NALR H+ME+A+GCD+V+SV+ FARRRQRG+CI+SG+GTVTNVTLRQPA+PGAIVTLHGR
Sbjct: 111 NALRTHLMEVADGCDIVESVATFARRRQRGVCIMSGTGTVTNVTLRQPASPGAIVTLHGR 170

Query: 359 FEILSLSGSFLPPPAPPSATGLTIYXXXXXXXXXXXXXXXXXXXXGPVVIMAASFGNAAY 180
           FEILSL+GSFLPPPAPP+ATGLTIY                    GPVVIMAASF NAAY
Sbjct: 171 FEILSLAGSFLPPPAPPAATGLTIYLAGGQGQVVGGSVVGTLTASGPVVIMAASFSNAAY 230

Query: 179 ERLPLEDEEPQLPMQSGGPLDSPGMVG 99
           ERLPLE+E+PQ+PMQ GG + SPG VG
Sbjct: 231 ERLPLEEEDPQMPMQGGG-MGSPGGVG 256


>ref|XP_002281296.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Vitis
           vinifera]
          Length = 302

 Score =  295 bits (755), Expect = 2e-77
 Identities = 168/267 (62%), Positives = 185/267 (69%), Gaps = 5/267 (1%)
 Frame = -1

Query: 884 MDQVTASAHGHSLPPPFHTRDLQLXXXXXXXXXXXXXXXXXXXXXXXQNSEDDE-GNSGL 708
           MD VTA  HGHSLPPPFHTRDL L                        NSED++ G+SGL
Sbjct: 1   MDPVTA--HGHSLPPPFHTRDLHLHHQQQHQFHPQQQ-----------NSEDEQSGSSGL 47

Query: 707 XXXXXXXXXXXXXXXDS----QDMVALSGGDSEITRRPRGRPAGSKNKPKPPIIITRDSA 540
                          +      +MV LSG D EI+RRPRGRPAGSKNKPKPPIIITRDSA
Sbjct: 48  NRGQKRDRDDNNENTNGGSEGNEMVGLSG-DGEISRRPRGRPAGSKNKPKPPIIITRDSA 106

Query: 539 NALRAHVMEIANGCDVVDSVSAFARRRQRGICILSGSGTVTNVTLRQPAAPGAIVTLHGR 360
           NALR HVMEIA+GCD+V+SV+ FARRRQRG+CI+SG+GTVTNVTLRQPA+PGAIVTLHGR
Sbjct: 107 NALRTHVMEIADGCDIVESVATFARRRQRGVCIMSGTGTVTNVTLRQPASPGAIVTLHGR 166

Query: 359 FEILSLSGSFLPPPAPPSATGLTIYXXXXXXXXXXXXXXXXXXXXGPVVIMAASFGNAAY 180
           FEILSLSGSFLPPPAPP+ATGLTIY                    GPVVIMAASF NAAY
Sbjct: 167 FEILSLSGSFLPPPAPPAATGLTIYLAGGQGQVVGGSVVGQLLASGPVVIMAASFSNAAY 226

Query: 179 ERLPLEDEEPQLPMQSGGPLDSPGMVG 99
           ERLPLE+E+P LPM  GG L SPG VG
Sbjct: 227 ERLPLEEEDPALPM-PGGSLGSPGGVG 252


>ref|XP_002511734.1| ESC, putative [Ricinus communis] gi|223548914|gb|EEF50403.1| ESC,
           putative [Ricinus communis]
          Length = 299

 Score =  295 bits (754), Expect = 3e-77
 Identities = 158/263 (60%), Positives = 184/263 (69%), Gaps = 1/263 (0%)
 Frame = -1

Query: 884 MDQVTASAHGHSLPPPFHTRDLQLXXXXXXXXXXXXXXXXXXXXXXXQNSEDDEGNSGLX 705
           MD V  +AHG  LPPPFHTRDL L                        NSED++  +G  
Sbjct: 1   MDPV--AAHGRPLPPPFHTRDLHLHPHHQFQHHHQQQQQQQ-------NSEDEQTGNGSI 51

Query: 704 XXXXXXXXXXXXXXDSQDMVALSGG-DSEITRRPRGRPAGSKNKPKPPIIITRDSANALR 528
                         + +++V  +GG D E+TRRPRGRPAGSKNKPKPPIIITRDSANALR
Sbjct: 52  NRGQKREHDEITTPEGKELVPTTGGGDGEMTRRPRGRPAGSKNKPKPPIIITRDSANALR 111

Query: 527 AHVMEIANGCDVVDSVSAFARRRQRGICILSGSGTVTNVTLRQPAAPGAIVTLHGRFEIL 348
           +HVMEIANG D+++SVS FARRRQRG+CILSG+GTVTNVTLRQPA+PGA+VTLHGRFEIL
Sbjct: 112 SHVMEIANGSDIMESVSTFARRRQRGVCILSGTGTVTNVTLRQPASPGAVVTLHGRFEIL 171

Query: 347 SLSGSFLPPPAPPSATGLTIYXXXXXXXXXXXXXXXXXXXXGPVVIMAASFGNAAYERLP 168
           SLSGSFLPPPAPP+A+GLTIY                    GPVVIMAASFGNAAYERLP
Sbjct: 172 SLSGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGPLLASGPVVIMAASFGNAAYERLP 231

Query: 167 LEDEEPQLPMQSGGPLDSPGMVG 99
           LE+++ Q+P+   GPLDSPG+VG
Sbjct: 232 LEEDDGQVPVPGSGPLDSPGVVG 254


>ref|XP_002303540.1| predicted protein [Populus trichocarpa] gi|222840972|gb|EEE78519.1|
           predicted protein [Populus trichocarpa]
          Length = 303

 Score =  293 bits (750), Expect = 7e-77
 Identities = 159/267 (59%), Positives = 185/267 (69%), Gaps = 5/267 (1%)
 Frame = -1

Query: 884 MDQVTASAHGHSLPPPFHTRDLQLXXXXXXXXXXXXXXXXXXXXXXXQNSEDDEG--NSG 711
           MD VTA  HGHSLPPPFHTRD QL                        NSED++   +SG
Sbjct: 1   MDPVTA--HGHSLPPPFHTRDFQLHHHQQQQQHQFHHQQQQ-------NSEDEQSGSSSG 51

Query: 710 LXXXXXXXXXXXXXXXDS---QDMVALSGGDSEITRRPRGRPAGSKNKPKPPIIITRDSA 540
           L                +   ++++    G+ EITRRPRGRP+GSKNKPKPPIIITRDSA
Sbjct: 52  LNKSLKRERDENNNSMGNSEGKELITSGSGEGEITRRPRGRPSGSKNKPKPPIIITRDSA 111

Query: 539 NALRAHVMEIANGCDVVDSVSAFARRRQRGICILSGSGTVTNVTLRQPAAPGAIVTLHGR 360
           NALR H+ME+A+GCD+V+SV+ FARRRQRG+CI+SG+GTVTNVTLRQPA+PGAIVTLHGR
Sbjct: 112 NALRTHLMEVADGCDIVESVATFARRRQRGVCIMSGTGTVTNVTLRQPASPGAIVTLHGR 171

Query: 359 FEILSLSGSFLPPPAPPSATGLTIYXXXXXXXXXXXXXXXXXXXXGPVVIMAASFGNAAY 180
           FEILSL+GSFLPPPAPP+ATGLTIY                    GPVVIMAASF NAAY
Sbjct: 172 FEILSLAGSFLPPPAPPAATGLTIYLAGGQGQVVGGSVVGTLTASGPVVIMAASFSNAAY 231

Query: 179 ERLPLEDEEPQLPMQSGGPLDSPGMVG 99
           ERLPLE+E+PQ+PMQ GG + SPG VG
Sbjct: 232 ERLPLEEEDPQMPMQ-GGEMGSPGAVG 257


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