BLASTX nr result
ID: Coptis24_contig00015113
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00015113 (1394 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002279636.1| PREDICTED: putative DNA-binding protein ESCA... 302 1e-79 ref|XP_002299584.1| predicted protein [Populus trichocarpa] gi|2... 296 7e-78 ref|XP_002281296.1| PREDICTED: putative DNA-binding protein ESCA... 295 2e-77 ref|XP_002511734.1| ESC, putative [Ricinus communis] gi|22354891... 295 3e-77 ref|XP_002303540.1| predicted protein [Populus trichocarpa] gi|2... 293 7e-77 >ref|XP_002279636.1| PREDICTED: putative DNA-binding protein ESCAROLA [Vitis vinifera] gi|147867329|emb|CAN81187.1| hypothetical protein VITISV_029906 [Vitis vinifera] gi|296089162|emb|CBI38865.3| unnamed protein product [Vitis vinifera] Length = 300 Score = 302 bits (774), Expect = 1e-79 Identities = 167/267 (62%), Positives = 184/267 (68%), Gaps = 5/267 (1%) Frame = -1 Query: 884 MDQVTASAHGHSLPPPFHTRDLQLXXXXXXXXXXXXXXXXXXXXXXXQNSEDDE-GNSGL 708 MD VTA HG LPPPFHTRDLQL NSED++ G+S L Sbjct: 1 MDPVTA--HGRPLPPPFHTRDLQL------------HHHHQYQHHPQANSEDEQSGSSSL 46 Query: 707 XXXXXXXXXXXXXXXDSQDM----VALSGGDSEITRRPRGRPAGSKNKPKPPIIITRDSA 540 ++ + S GD EITRRPRGRPAGSKNKPKPPIIITRDSA Sbjct: 47 NRAQKRDRDESNATNNTSPIDGKEFGTSSGDGEITRRPRGRPAGSKNKPKPPIIITRDSA 106 Query: 539 NALRAHVMEIANGCDVVDSVSAFARRRQRGICILSGSGTVTNVTLRQPAAPGAIVTLHGR 360 NALR+HVMEIA GCD++DS++ FARRRQRGICILSGSGTVTNVTLRQPA+PGA+VTLHGR Sbjct: 107 NALRSHVMEIATGCDIMDSLNTFARRRQRGICILSGSGTVTNVTLRQPASPGAVVTLHGR 166 Query: 359 FEILSLSGSFLPPPAPPSATGLTIYXXXXXXXXXXXXXXXXXXXXGPVVIMAASFGNAAY 180 FEILSLSGSFLPPPAPP+A+GLTIY GPVVIMAASFGNAAY Sbjct: 167 FEILSLSGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGPLLASGPVVIMAASFGNAAY 226 Query: 179 ERLPLEDEEPQLPMQSGGPLDSPGMVG 99 ERLPLEDEEPQ+P+ GPL SPGMVG Sbjct: 227 ERLPLEDEEPQVPIPGSGPLGSPGMVG 253 >ref|XP_002299584.1| predicted protein [Populus trichocarpa] gi|222846842|gb|EEE84389.1| predicted protein [Populus trichocarpa] Length = 302 Score = 296 bits (759), Expect = 7e-78 Identities = 162/267 (60%), Positives = 185/267 (69%), Gaps = 5/267 (1%) Frame = -1 Query: 884 MDQVTASAHGHSLPPPFHTRDLQLXXXXXXXXXXXXXXXXXXXXXXXQNSEDDEG--NSG 711 MD VTA HGHSLPPPFHTRD QL NSED++ +SG Sbjct: 1 MDPVTA--HGHSLPPPFHTRDFQLHQQQQQQHQFHHQQQQ--------NSEDEQSGSSSG 50 Query: 710 LXXXXXXXXXXXXXXXDS---QDMVALSGGDSEITRRPRGRPAGSKNKPKPPIIITRDSA 540 L + Q+++ GD EITRRPRGRPAGSKNKPKPPIIITRDSA Sbjct: 51 LNKSLKRERDESNNSMGNREGQELITSGDGDGEITRRPRGRPAGSKNKPKPPIIITRDSA 110 Query: 539 NALRAHVMEIANGCDVVDSVSAFARRRQRGICILSGSGTVTNVTLRQPAAPGAIVTLHGR 360 NALR H+ME+A+GCD+V+SV+ FARRRQRG+CI+SG+GTVTNVTLRQPA+PGAIVTLHGR Sbjct: 111 NALRTHLMEVADGCDIVESVATFARRRQRGVCIMSGTGTVTNVTLRQPASPGAIVTLHGR 170 Query: 359 FEILSLSGSFLPPPAPPSATGLTIYXXXXXXXXXXXXXXXXXXXXGPVVIMAASFGNAAY 180 FEILSL+GSFLPPPAPP+ATGLTIY GPVVIMAASF NAAY Sbjct: 171 FEILSLAGSFLPPPAPPAATGLTIYLAGGQGQVVGGSVVGTLTASGPVVIMAASFSNAAY 230 Query: 179 ERLPLEDEEPQLPMQSGGPLDSPGMVG 99 ERLPLE+E+PQ+PMQ GG + SPG VG Sbjct: 231 ERLPLEEEDPQMPMQGGG-MGSPGGVG 256 >ref|XP_002281296.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Vitis vinifera] Length = 302 Score = 295 bits (755), Expect = 2e-77 Identities = 168/267 (62%), Positives = 185/267 (69%), Gaps = 5/267 (1%) Frame = -1 Query: 884 MDQVTASAHGHSLPPPFHTRDLQLXXXXXXXXXXXXXXXXXXXXXXXQNSEDDE-GNSGL 708 MD VTA HGHSLPPPFHTRDL L NSED++ G+SGL Sbjct: 1 MDPVTA--HGHSLPPPFHTRDLHLHHQQQHQFHPQQQ-----------NSEDEQSGSSGL 47 Query: 707 XXXXXXXXXXXXXXXDS----QDMVALSGGDSEITRRPRGRPAGSKNKPKPPIIITRDSA 540 + +MV LSG D EI+RRPRGRPAGSKNKPKPPIIITRDSA Sbjct: 48 NRGQKRDRDDNNENTNGGSEGNEMVGLSG-DGEISRRPRGRPAGSKNKPKPPIIITRDSA 106 Query: 539 NALRAHVMEIANGCDVVDSVSAFARRRQRGICILSGSGTVTNVTLRQPAAPGAIVTLHGR 360 NALR HVMEIA+GCD+V+SV+ FARRRQRG+CI+SG+GTVTNVTLRQPA+PGAIVTLHGR Sbjct: 107 NALRTHVMEIADGCDIVESVATFARRRQRGVCIMSGTGTVTNVTLRQPASPGAIVTLHGR 166 Query: 359 FEILSLSGSFLPPPAPPSATGLTIYXXXXXXXXXXXXXXXXXXXXGPVVIMAASFGNAAY 180 FEILSLSGSFLPPPAPP+ATGLTIY GPVVIMAASF NAAY Sbjct: 167 FEILSLSGSFLPPPAPPAATGLTIYLAGGQGQVVGGSVVGQLLASGPVVIMAASFSNAAY 226 Query: 179 ERLPLEDEEPQLPMQSGGPLDSPGMVG 99 ERLPLE+E+P LPM GG L SPG VG Sbjct: 227 ERLPLEEEDPALPM-PGGSLGSPGGVG 252 >ref|XP_002511734.1| ESC, putative [Ricinus communis] gi|223548914|gb|EEF50403.1| ESC, putative [Ricinus communis] Length = 299 Score = 295 bits (754), Expect = 3e-77 Identities = 158/263 (60%), Positives = 184/263 (69%), Gaps = 1/263 (0%) Frame = -1 Query: 884 MDQVTASAHGHSLPPPFHTRDLQLXXXXXXXXXXXXXXXXXXXXXXXQNSEDDEGNSGLX 705 MD V +AHG LPPPFHTRDL L NSED++ +G Sbjct: 1 MDPV--AAHGRPLPPPFHTRDLHLHPHHQFQHHHQQQQQQQ-------NSEDEQTGNGSI 51 Query: 704 XXXXXXXXXXXXXXDSQDMVALSGG-DSEITRRPRGRPAGSKNKPKPPIIITRDSANALR 528 + +++V +GG D E+TRRPRGRPAGSKNKPKPPIIITRDSANALR Sbjct: 52 NRGQKREHDEITTPEGKELVPTTGGGDGEMTRRPRGRPAGSKNKPKPPIIITRDSANALR 111 Query: 527 AHVMEIANGCDVVDSVSAFARRRQRGICILSGSGTVTNVTLRQPAAPGAIVTLHGRFEIL 348 +HVMEIANG D+++SVS FARRRQRG+CILSG+GTVTNVTLRQPA+PGA+VTLHGRFEIL Sbjct: 112 SHVMEIANGSDIMESVSTFARRRQRGVCILSGTGTVTNVTLRQPASPGAVVTLHGRFEIL 171 Query: 347 SLSGSFLPPPAPPSATGLTIYXXXXXXXXXXXXXXXXXXXXGPVVIMAASFGNAAYERLP 168 SLSGSFLPPPAPP+A+GLTIY GPVVIMAASFGNAAYERLP Sbjct: 172 SLSGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGPLLASGPVVIMAASFGNAAYERLP 231 Query: 167 LEDEEPQLPMQSGGPLDSPGMVG 99 LE+++ Q+P+ GPLDSPG+VG Sbjct: 232 LEEDDGQVPVPGSGPLDSPGVVG 254 >ref|XP_002303540.1| predicted protein [Populus trichocarpa] gi|222840972|gb|EEE78519.1| predicted protein [Populus trichocarpa] Length = 303 Score = 293 bits (750), Expect = 7e-77 Identities = 159/267 (59%), Positives = 185/267 (69%), Gaps = 5/267 (1%) Frame = -1 Query: 884 MDQVTASAHGHSLPPPFHTRDLQLXXXXXXXXXXXXXXXXXXXXXXXQNSEDDEG--NSG 711 MD VTA HGHSLPPPFHTRD QL NSED++ +SG Sbjct: 1 MDPVTA--HGHSLPPPFHTRDFQLHHHQQQQQHQFHHQQQQ-------NSEDEQSGSSSG 51 Query: 710 LXXXXXXXXXXXXXXXDS---QDMVALSGGDSEITRRPRGRPAGSKNKPKPPIIITRDSA 540 L + ++++ G+ EITRRPRGRP+GSKNKPKPPIIITRDSA Sbjct: 52 LNKSLKRERDENNNSMGNSEGKELITSGSGEGEITRRPRGRPSGSKNKPKPPIIITRDSA 111 Query: 539 NALRAHVMEIANGCDVVDSVSAFARRRQRGICILSGSGTVTNVTLRQPAAPGAIVTLHGR 360 NALR H+ME+A+GCD+V+SV+ FARRRQRG+CI+SG+GTVTNVTLRQPA+PGAIVTLHGR Sbjct: 112 NALRTHLMEVADGCDIVESVATFARRRQRGVCIMSGTGTVTNVTLRQPASPGAIVTLHGR 171 Query: 359 FEILSLSGSFLPPPAPPSATGLTIYXXXXXXXXXXXXXXXXXXXXGPVVIMAASFGNAAY 180 FEILSL+GSFLPPPAPP+ATGLTIY GPVVIMAASF NAAY Sbjct: 172 FEILSLAGSFLPPPAPPAATGLTIYLAGGQGQVVGGSVVGTLTASGPVVIMAASFSNAAY 231 Query: 179 ERLPLEDEEPQLPMQSGGPLDSPGMVG 99 ERLPLE+E+PQ+PMQ GG + SPG VG Sbjct: 232 ERLPLEEEDPQMPMQ-GGEMGSPGAVG 257