BLASTX nr result

ID: Coptis24_contig00015109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015109
         (636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268582.1| PREDICTED: uncharacterized protein LOC100258...   187   1e-45
ref|XP_002519462.1| conserved hypothetical protein [Ricinus comm...   178   9e-43
ref|XP_002326208.1| predicted protein [Populus trichocarpa] gi|2...   176   3e-42
gb|AFK47354.1| unknown [Lotus japonicus]                              172   5e-41
ref|XP_004137845.1| PREDICTED: uncharacterized protein LOC101222...   171   1e-40

>ref|XP_002268582.1| PREDICTED: uncharacterized protein LOC100258894 [Vitis vinifera]
           gi|147860818|emb|CAN81061.1| hypothetical protein
           VITISV_042420 [Vitis vinifera]
           gi|297739976|emb|CBI30158.3| unnamed protein product
           [Vitis vinifera]
          Length = 126

 Score =  187 bits (476), Expect = 1e-45
 Identities = 90/128 (70%), Positives = 110/128 (85%), Gaps = 4/128 (3%)
 Frame = +1

Query: 16  MSKK----ALQKDVPWRATPTNANKPLPKIHHSPILRLPQNSNSLYALSVMKHPDPIGDG 183
           MSK+    ALQKDVPWRA+P+   KP+PKIHHSPILR+ Q  +S YALS+MKHP+PIGDG
Sbjct: 1   MSKRGGGAALQKDVPWRASPSG--KPIPKIHHSPILRVSQTPSSHYALSIMKHPNPIGDG 58

Query: 184 FAFEATLEAAGPDCLVPGQLTPIMLLGLKVWPINVDLKFIEPVGKELRNIGKFMDSAVNL 363
            A EA +EAAGPDC+VPGQ+TP+ LLGLKVWPI++D+KF+EPVG+EL+ +GKFMDSAV+L
Sbjct: 59  LATEAIVEAAGPDCIVPGQVTPVRLLGLKVWPIHIDMKFMEPVGRELKLLGKFMDSAVDL 118

Query: 364 MNASFQDR 387
           MN SF DR
Sbjct: 119 MNKSFIDR 126


>ref|XP_002519462.1| conserved hypothetical protein [Ricinus communis]
           gi|223541325|gb|EEF42876.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 129

 Score =  178 bits (451), Expect = 9e-43
 Identities = 85/119 (71%), Positives = 102/119 (85%)
 Frame = +1

Query: 31  LQKDVPWRATPTNANKPLPKIHHSPILRLPQNSNSLYALSVMKHPDPIGDGFAFEATLEA 210
           LQKDVPWRA+   ++KPLPKIHHSPILR+P    S YALSVMKHP+PIG G A EA +E+
Sbjct: 14  LQKDVPWRAS---SSKPLPKIHHSPILRVPNTPYSNYALSVMKHPNPIGSGLATEAIVES 70

Query: 211 AGPDCLVPGQLTPIMLLGLKVWPINVDLKFIEPVGKELRNIGKFMDSAVNLMNASFQDR 387
           AG DC+VPGQ+TP+ LLG+KVWPI+VDLKF+EPVG+EL+ +GKFMD+AVNLMN SF DR
Sbjct: 71  AGGDCIVPGQITPLRLLGVKVWPIDVDLKFMEPVGRELKLLGKFMDNAVNLMNKSFIDR 129


>ref|XP_002326208.1| predicted protein [Populus trichocarpa] gi|222833401|gb|EEE71878.1|
           predicted protein [Populus trichocarpa]
          Length = 126

 Score =  176 bits (446), Expect = 3e-42
 Identities = 88/129 (68%), Positives = 101/129 (78%), Gaps = 5/129 (3%)
 Frame = +1

Query: 16  MSKKA-----LQKDVPWRATPTNANKPLPKIHHSPILRLPQNSNSLYALSVMKHPDPIGD 180
           MSKK      LQKDVPWR +    +KP+PKIHHSPILR+ QN    YALSVMKHP+PIG 
Sbjct: 1   MSKKGGTTPGLQKDVPWRVS---TSKPIPKIHHSPILRVSQNPFCDYALSVMKHPNPIGT 57

Query: 181 GFAFEATLEAAGPDCLVPGQLTPIMLLGLKVWPINVDLKFIEPVGKELRNIGKFMDSAVN 360
           G A EA +EAAGPDC+VPGQ+TP  +LGLKVWPI  DLKF+EPVG+EL+ +GKFMD AVN
Sbjct: 58  GLATEALVEAAGPDCIVPGQITPFRVLGLKVWPIEFDLKFMEPVGRELKLLGKFMDDAVN 117

Query: 361 LMNASFQDR 387
           LMN SF DR
Sbjct: 118 LMNKSFVDR 126


>gb|AFK47354.1| unknown [Lotus japonicus]
          Length = 130

 Score =  172 bits (436), Expect = 5e-41
 Identities = 86/131 (65%), Positives = 102/131 (77%), Gaps = 7/131 (5%)
 Frame = +1

Query: 16  MSKK-------ALQKDVPWRATPTNANKPLPKIHHSPILRLPQNSNSLYALSVMKHPDPI 174
           MSKK       +LQ DVPWRA  +++ KP+PKIH SP+LR+ QN  S YA+SVM+HPDPI
Sbjct: 1   MSKKGAGGGSPSLQNDVPWRAL-SSSMKPVPKIHQSPVLRISQNPFSDYAISVMRHPDPI 59

Query: 175 GDGFAFEATLEAAGPDCLVPGQLTPIMLLGLKVWPINVDLKFIEPVGKELRNIGKFMDSA 354
           G GF   A +EAAGPDC+VPGQ  PI LLGLKVWPINVDLKF+EPVG+EL+ +GKFMD A
Sbjct: 60  GGGFGEGAIVEAAGPDCIVPGQAMPIKLLGLKVWPINVDLKFLEPVGRELKQLGKFMDDA 119

Query: 355 VNLMNASFQDR 387
           V LMN SF +R
Sbjct: 120 VELMNKSFIER 130


>ref|XP_004137845.1| PREDICTED: uncharacterized protein LOC101222625 [Cucumis sativus]
           gi|449517339|ref|XP_004165703.1| PREDICTED:
           uncharacterized LOC101222625 [Cucumis sativus]
          Length = 126

 Score =  171 bits (432), Expect = 1e-40
 Identities = 85/130 (65%), Positives = 101/130 (77%), Gaps = 6/130 (4%)
 Frame = +1

Query: 16  MSKKAL------QKDVPWRATPTNANKPLPKIHHSPILRLPQNSNSLYALSVMKHPDPIG 177
           MSKK L       KD PWRA+     KP+PKI+H+P+LR+ Q+  S YALSVMKHPDPIG
Sbjct: 1   MSKKGLPGGAPLSKDAPWRAS----GKPIPKINHAPLLRISQSPFSNYALSVMKHPDPIG 56

Query: 178 DGFAFEATLEAAGPDCLVPGQLTPIMLLGLKVWPINVDLKFIEPVGKELRNIGKFMDSAV 357
            G A +A LEAAGPDC+VPGQ  P+ LLGLKVWPI+VDLKF+EPVG+EL+ +GKFMD AV
Sbjct: 57  SGLATDAILEAAGPDCIVPGQSAPVKLLGLKVWPIDVDLKFLEPVGRELKLLGKFMDDAV 116

Query: 358 NLMNASFQDR 387
           +LMN SF DR
Sbjct: 117 DLMNKSFIDR 126


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