BLASTX nr result

ID: Coptis24_contig00015106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015106
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316140.1| predicted protein [Populus trichocarpa] gi|2...   164   9e-39
ref|XP_002271878.2| PREDICTED: uracil-DNA glycosylase [Vitis vin...   162   3e-38
emb|CBI27448.3| unnamed protein product [Vitis vinifera]              162   3e-38
ref|XP_003540731.1| PREDICTED: uracil-DNA glycosylase-like [Glyc...   161   6e-38
ref|XP_003580805.1| PREDICTED: uracil-DNA glycosylase-like [Brac...   160   1e-37

>ref|XP_002316140.1| predicted protein [Populus trichocarpa] gi|222865180|gb|EEF02311.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  164 bits (414), Expect = 9e-39
 Identities = 74/91 (81%), Positives = 84/91 (92%)
 Frame = +3

Query: 3   HQANSHAKKGWEPFTDAIIQSISLKKSGVVFLLWGNSAQEKSRLIDNSKHHILKAAHPSG 182
           HQANSH+KKGWE FTDA+I++IS KK GVVFLLWGNSAQEKS+LID +KHHILKAAHPSG
Sbjct: 126 HQANSHSKKGWEHFTDAVIKTISQKKEGVVFLLWGNSAQEKSKLIDQTKHHILKAAHPSG 185

Query: 183 LSANRGFFGCRHFSQANELLVQMGMHPIDWQ 275
           LSANRGFFGCRHFS+ N+LL QMG+ PI+WQ
Sbjct: 186 LSANRGFFGCRHFSRTNKLLAQMGISPIEWQ 216


>ref|XP_002271878.2| PREDICTED: uracil-DNA glycosylase [Vitis vinifera]
          Length = 328

 Score =  162 bits (409), Expect = 3e-38
 Identities = 73/92 (79%), Positives = 85/92 (92%)
 Frame = +3

Query: 3   HQANSHAKKGWEPFTDAIIQSISLKKSGVVFLLWGNSAQEKSRLIDNSKHHILKAAHPSG 182
           HQANSHAKKGWE FTD++I++IS K+ GVVFLLWGNSAQEKSRLID++KHHILKAAHPSG
Sbjct: 237 HQANSHAKKGWEQFTDSVIRTISQKQRGVVFLLWGNSAQEKSRLIDDTKHHILKAAHPSG 296

Query: 183 LSANRGFFGCRHFSQANELLVQMGMHPIDWQI 278
           LSANRGFFGCRHFS+ N++L Q G+ PIDWQ+
Sbjct: 297 LSANRGFFGCRHFSRTNKILEQKGVPPIDWQL 328


>emb|CBI27448.3| unnamed protein product [Vitis vinifera]
          Length = 321

 Score =  162 bits (409), Expect = 3e-38
 Identities = 73/92 (79%), Positives = 85/92 (92%)
 Frame = +3

Query: 3   HQANSHAKKGWEPFTDAIIQSISLKKSGVVFLLWGNSAQEKSRLIDNSKHHILKAAHPSG 182
           HQANSHAKKGWE FTD++I++IS K+ GVVFLLWGNSAQEKSRLID++KHHILKAAHPSG
Sbjct: 230 HQANSHAKKGWEQFTDSVIRTISQKQRGVVFLLWGNSAQEKSRLIDDTKHHILKAAHPSG 289

Query: 183 LSANRGFFGCRHFSQANELLVQMGMHPIDWQI 278
           LSANRGFFGCRHFS+ N++L Q G+ PIDWQ+
Sbjct: 290 LSANRGFFGCRHFSRTNKILEQKGVPPIDWQL 321


>ref|XP_003540731.1| PREDICTED: uracil-DNA glycosylase-like [Glycine max]
          Length = 303

 Score =  161 bits (407), Expect = 6e-38
 Identities = 73/92 (79%), Positives = 82/92 (89%)
 Frame = +3

Query: 3   HQANSHAKKGWEPFTDAIIQSISLKKSGVVFLLWGNSAQEKSRLIDNSKHHILKAAHPSG 182
           HQANSHAKKGWE FTD +I++IS KK GVVFLLWGNSA+EKSRLID  KHH+L AAHPSG
Sbjct: 212 HQANSHAKKGWEQFTDVVIKTISQKKEGVVFLLWGNSAREKSRLIDARKHHVLTAAHPSG 271

Query: 183 LSANRGFFGCRHFSQANELLVQMGMHPIDWQI 278
           LSANRGFFGCRHFS+ N+LL QMG+ PIDWQ+
Sbjct: 272 LSANRGFFGCRHFSRTNQLLEQMGIDPIDWQL 303


>ref|XP_003580805.1| PREDICTED: uracil-DNA glycosylase-like [Brachypodium distachyon]
          Length = 310

 Score =  160 bits (404), Expect = 1e-37
 Identities = 72/92 (78%), Positives = 83/92 (90%)
 Frame = +3

Query: 3   HQANSHAKKGWEPFTDAIIQSISLKKSGVVFLLWGNSAQEKSRLIDNSKHHILKAAHPSG 182
           HQANSHAKKGWE FTDA+I++IS KKSG+VFLLWGNSAQ K RLID +KHHILK+AHPSG
Sbjct: 219 HQANSHAKKGWEQFTDAVIKTISQKKSGLVFLLWGNSAQAKIRLIDETKHHILKSAHPSG 278

Query: 183 LSANRGFFGCRHFSQANELLVQMGMHPIDWQI 278
           LSANRGFFGCRHFSQ NE+L ++G+  IDWQ+
Sbjct: 279 LSANRGFFGCRHFSQTNEILERLGLSTIDWQV 310


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