BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015104
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310410.1| predicted protein [Populus trichocarpa] gi|2...   143   2e-57
ref|XP_002327907.1| predicted protein [Populus trichocarpa] gi|2...   143   7e-57
ref|XP_002276985.1| PREDICTED: DDB1- and CUL4-associated factor ...   144   3e-56
ref|XP_002517863.1| U3 small nucleolar RNA (U3 snorna) associate...   143   2e-54
ref|XP_004144522.1| PREDICTED: DDB1- and CUL4-associated factor ...   138   2e-54

>ref|XP_002310410.1| predicted protein [Populus trichocarpa] gi|222853313|gb|EEE90860.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score =  143 bits (361), Expect(2) = 2e-57
 Identities = 67/81 (82%), Positives = 70/81 (86%)
 Frame = +1

Query: 1   HVSAVMDIDYSPTEREFVMGSYDRTVRIFQYNGGHSREIYHTTRMNRVFCAKFSCDGTYV 180
           HVSAVMDID+SPT REFV GSYDRTVRIFQYNGGHSREIYHT RM RVFC KFSCD +YV
Sbjct: 288 HVSAVMDIDFSPTGREFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVFCVKFSCDASYV 347

Query: 181 ISASDDTNLRLWKAKGIRTVG 243
           IS SDDTNLRLWKAK    +G
Sbjct: 348 ISGSDDTNLRLWKAKASEQLG 368



 Score =  103 bits (258), Expect(2) = 2e-57
 Identities = 50/77 (64%), Positives = 64/77 (83%)
 Frame = +2

Query: 218 KLRGSEQLGIQLPRERRRHEYYDALIKASHKNLPCVKRILRNRHLPKPLYKSVILKRTML 397
           K + SEQLGI LPRE+RRHEY +AL K  +K+LP VKRI+R+RHLPKP+YK+ +L+R M+
Sbjct: 360 KAKASEQLGILLPREQRRHEYNEAL-KTRYKHLPEVKRIVRHRHLPKPIYKAGVLRRVMI 418

Query: 398 ASHRKKDKRRKAHSAPG 448
            + R+KD RRKAHSAPG
Sbjct: 419 EAERRKDHRRKAHSAPG 435


>ref|XP_002327907.1| predicted protein [Populus trichocarpa] gi|222837316|gb|EEE75695.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score =  143 bits (361), Expect(2) = 7e-57
 Identities = 67/81 (82%), Positives = 70/81 (86%)
 Frame = +1

Query: 1   HVSAVMDIDYSPTEREFVMGSYDRTVRIFQYNGGHSREIYHTTRMNRVFCAKFSCDGTYV 180
           HVSAVMDID+SPT REFV GSYDRTVRIFQYNGGHSREIYHT RM RVFC KFSCD +YV
Sbjct: 288 HVSAVMDIDFSPTGREFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVFCVKFSCDASYV 347

Query: 181 ISASDDTNLRLWKAKGIRTVG 243
           IS SDDTNLRLWKAK    +G
Sbjct: 348 ISGSDDTNLRLWKAKASEQLG 368



 Score =  102 bits (254), Expect(2) = 7e-57
 Identities = 48/77 (62%), Positives = 65/77 (84%)
 Frame = +2

Query: 218 KLRGSEQLGIQLPRERRRHEYYDALIKASHKNLPCVKRILRNRHLPKPLYKSVILKRTML 397
           K + SEQLG+ LPRE++RHEY +AL K  +K+LP VKRI+R+RHLPKP+YK+ +L+R M+
Sbjct: 360 KAKASEQLGVLLPREQKRHEYNEAL-KNRYKHLPEVKRIVRHRHLPKPIYKAGVLRRVMI 418

Query: 398 ASHRKKDKRRKAHSAPG 448
            + R+KD+RRKAHSAPG
Sbjct: 419 EAERRKDQRRKAHSAPG 435


>ref|XP_002276985.1| PREDICTED: DDB1- and CUL4-associated factor 13 [Vitis vinifera]
           gi|302143337|emb|CBI21898.3| unnamed protein product
           [Vitis vinifera]
          Length = 452

 Score =  144 bits (362), Expect(2) = 3e-56
 Identities = 67/81 (82%), Positives = 70/81 (86%)
 Frame = +1

Query: 1   HVSAVMDIDYSPTEREFVMGSYDRTVRIFQYNGGHSREIYHTTRMNRVFCAKFSCDGTYV 180
           HVSAVMDIDYSPT REFV GSYDRTVRIFQYNGGHSREIYHT RM RVFC KF+CD +YV
Sbjct: 288 HVSAVMDIDYSPTGREFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVFCVKFTCDASYV 347

Query: 181 ISASDDTNLRLWKAKGIRTVG 243
           IS SDDTNLRLWKAK    +G
Sbjct: 348 ISGSDDTNLRLWKAKASEQLG 368



 Score =  100 bits (248), Expect(2) = 3e-56
 Identities = 45/77 (58%), Positives = 65/77 (84%)
 Frame = +2

Query: 218 KLRGSEQLGIQLPRERRRHEYYDALIKASHKNLPCVKRILRNRHLPKPLYKSVILKRTML 397
           K + SEQLG+ LPRER++HEY++A +K  +K+LP VKRI+R+RHLPKP++K+  L+RTM 
Sbjct: 360 KAKASEQLGVLLPRERKKHEYHEA-VKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTMT 418

Query: 398 ASHRKKDKRRKAHSAPG 448
            + R+K+++RKAHSAPG
Sbjct: 419 EAERRKEEKRKAHSAPG 435


>ref|XP_002517863.1| U3 small nucleolar RNA (U3 snorna) associated protein, putative
           [Ricinus communis] gi|223542845|gb|EEF44381.1| U3 small
           nucleolar RNA (U3 snorna) associated protein, putative
           [Ricinus communis]
          Length = 452

 Score =  143 bits (360), Expect(2) = 2e-54
 Identities = 66/81 (81%), Positives = 70/81 (86%)
 Frame = +1

Query: 1   HVSAVMDIDYSPTEREFVMGSYDRTVRIFQYNGGHSREIYHTTRMNRVFCAKFSCDGTYV 180
           HVSAVMDID+SPT REFV GSYDRTVRIF YNGGHSREIYHT RM RVFC KFSCDG+Y+
Sbjct: 288 HVSAVMDIDFSPTGREFVTGSYDRTVRIFPYNGGHSREIYHTKRMQRVFCVKFSCDGSYI 347

Query: 181 ISASDDTNLRLWKAKGIRTVG 243
           IS SDDTNLRLWKAK    +G
Sbjct: 348 ISGSDDTNLRLWKAKASEQLG 368



 Score = 94.4 bits (233), Expect(2) = 2e-54
 Identities = 42/77 (54%), Positives = 62/77 (80%)
 Frame = +2

Query: 218 KLRGSEQLGIQLPRERRRHEYYDALIKASHKNLPCVKRILRNRHLPKPLYKSVILKRTML 397
           K + SEQLG+ LPRER+RHEY +A +K  +K+LP +KRI+R+RHLPKP+YK+  ++RT+ 
Sbjct: 360 KAKASEQLGVLLPRERKRHEYNEA-VKNRYKHLPEIKRIVRHRHLPKPIYKAAEIRRTVT 418

Query: 398 ASHRKKDKRRKAHSAPG 448
            + ++K+ RR+AHS PG
Sbjct: 419 EAEKRKEDRRRAHSTPG 435


>ref|XP_004144522.1| PREDICTED: DDB1- and CUL4-associated factor 13-like [Cucumis
           sativus]
          Length = 451

 Score =  138 bits (347), Expect(2) = 2e-54
 Identities = 63/81 (77%), Positives = 69/81 (85%)
 Frame = +1

Query: 1   HVSAVMDIDYSPTEREFVMGSYDRTVRIFQYNGGHSREIYHTTRMNRVFCAKFSCDGTYV 180
           HVSAVMDID+SP+ REFV GSYDRT+RIF YNGGHSREIYHT RM RVFC +FSCD +YV
Sbjct: 287 HVSAVMDIDFSPSGREFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYV 346

Query: 181 ISASDDTNLRLWKAKGIRTVG 243
           IS SDDTNLRLWKAK    +G
Sbjct: 347 ISGSDDTNLRLWKAKASEQLG 367



 Score = 99.4 bits (246), Expect(2) = 2e-54
 Identities = 45/77 (58%), Positives = 65/77 (84%)
 Frame = +2

Query: 218 KLRGSEQLGIQLPRERRRHEYYDALIKASHKNLPCVKRILRNRHLPKPLYKSVILKRTML 397
           K + SEQLG+ LPRE+R+HEY +A +K  +K+LP VKRI+R+RHLPKP++K+  L+RT++
Sbjct: 359 KAKASEQLGVLLPREKRKHEYQEA-VKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTII 417

Query: 398 ASHRKKDKRRKAHSAPG 448
            + R+K++RRKAHSAPG
Sbjct: 418 DAERRKEERRKAHSAPG 434