BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015103
         (1621 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276985.1| PREDICTED: DDB1- and CUL4-associated factor ...   754   0.0  
ref|XP_002517863.1| U3 small nucleolar RNA (U3 snorna) associate...   742   0.0  
ref|XP_002327907.1| predicted protein [Populus trichocarpa] gi|2...   736   0.0  
ref|XP_002310410.1| predicted protein [Populus trichocarpa] gi|2...   730   0.0  
ref|XP_004144522.1| PREDICTED: DDB1- and CUL4-associated factor ...   725   0.0  

>ref|XP_002276985.1| PREDICTED: DDB1- and CUL4-associated factor 13 [Vitis vinifera]
            gi|302143337|emb|CBI21898.3| unnamed protein product
            [Vitis vinifera]
          Length = 452

 Score =  754 bits (1948), Expect = 0.0
 Identities = 359/462 (77%), Positives = 407/462 (88%), Gaps = 1/462 (0%)
 Frame = -1

Query: 1573 MRVKTISRSNDDFTRERSQDLLKVFRNYDPNLRTQEKSVEYVRALKAAKLEKIFARPFVG 1394
            M+VK ISRS D+FTRERSQDL +VFRN+DPNLR QEK+VEYVRAL AAKL+K+FARPF+G
Sbjct: 1    MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRKQEKAVEYVRALNAAKLDKVFARPFIG 60

Query: 1393 AMEGHIDGITCMAKNPNHLKGIFSASIDGDIRLWDLATRRTVCQFPGRKGEAQGREFDGH 1214
            AM+GHID I+CMAKNPN+LKGIFS S+DGDIRLWD+A+RRTVCQFPG            H
Sbjct: 61   AMDGHIDSISCMAKNPNYLKGIFSGSMDGDIRLWDIASRRTVCQFPG------------H 108

Query: 1213 QREVMGLTCSTDGRILVSCGVDCTVRLWRVPVAGIMESDDSFGSS-QPLAVYVWKNSFWG 1037
            Q  V GLT STDGRILVSCG DCTVRLW VPVA I +SDDS  +S +PLAV+VWKN+FWG
Sbjct: 109  QGAVRGLTASTDGRILVSCGTDCTVRLWNVPVATISDSDDSSDNSMKPLAVHVWKNAFWG 168

Query: 1036 VDHQWDGDRFATAGAQVDIWDHNRSEPVSTFQWGNDTFTSVRFNPGEPNLLATSDRERNI 857
            VDHQWDG+ FATAGAQVDIWDHNRS+PV+TFQWGND+  +VRFNPGEP++LA S  +R++
Sbjct: 169  VDHQWDGNLFATAGAQVDIWDHNRSQPVNTFQWGNDSVIAVRFNPGEPDILAASASDRSL 228

Query: 856  TLYDLRLSSPVARLKMKTKTNSISWNPMEPMNFTAANEDCNCYSYDARKLDEAKCVHKGH 677
             LYDLR+SSP  +L M+TKTNSISWNPMEPMNFTAANEDCNCYSYDARKLDEAKCVHK H
Sbjct: 229  ILYDLRMSSPARKLIMRTKTNSISWNPMEPMNFTAANEDCNCYSYDARKLDEAKCVHKDH 288

Query: 676  VNAVMDIDYSPTGREFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVFSVKFSCDGTYVL 497
            V+AVMDIDYSPTGREFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVF VKF+CD +YV+
Sbjct: 289  VSAVMDIDYSPTGREFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVFCVKFTCDASYVI 348

Query: 496  SGSDDTNLRLWKAQASEQLGVVLPRERKKHEYDEAIKNRYKHLPEVKRIVRHKHLPKPIY 317
            SGSDDTNLRLWKA+ASEQLGV+LPRERKKHEY EA+KNRYKHLPEVKRIVRH+HLPKPI+
Sbjct: 349  SGSDDTNLRLWKAKASEQLGVLLPRERKKHEYHEAVKNRYKHLPEVKRIVRHRHLPKPIF 408

Query: 316  NASKLSRQKIDKERRKDANRRAHSAPGSMPTETVRKRRIIKE 191
             A+ L R   + ERRK+  R+AHSAPGS+ TE +RKRRII+E
Sbjct: 409  KAAALRRTMTEAERRKEEKRKAHSAPGSISTEPLRKRRIIQE 450


>ref|XP_002517863.1| U3 small nucleolar RNA (U3 snorna) associated protein, putative
            [Ricinus communis] gi|223542845|gb|EEF44381.1| U3 small
            nucleolar RNA (U3 snorna) associated protein, putative
            [Ricinus communis]
          Length = 452

 Score =  742 bits (1916), Expect = 0.0
 Identities = 351/462 (75%), Positives = 406/462 (87%), Gaps = 1/462 (0%)
 Frame = -1

Query: 1573 MRVKTISRSNDDFTRERSQDLLKVFRNYDPNLRTQEKSVEYVRALKAAKLEKIFARPFVG 1394
            M+VK ISRS+DDFTRERSQDL +VFRN+DP+LRTQEKS+EYVRAL AAKL+KIFARPF+G
Sbjct: 1    MKVKVISRSSDDFTRERSQDLQRVFRNFDPSLRTQEKSIEYVRALNAAKLDKIFARPFIG 60

Query: 1393 AMEGHIDGITCMAKNPNHLKGIFSASIDGDIRLWDLATRRTVCQFPGRKGEAQGREFDGH 1214
            AM+GHID I+CMAKNPN+LKGIFS S+DGDIRLWD+A+RRTVCQFPG            H
Sbjct: 61   AMDGHIDAISCMAKNPNYLKGIFSGSMDGDIRLWDIASRRTVCQFPG------------H 108

Query: 1213 QREVMGLTCSTDGRILVSCGVDCTVRLWRVPVAGIMESDD-SFGSSQPLAVYVWKNSFWG 1037
            Q  V GLT STDG IL+SCG DCT RLW+VPVA +MESD  S  S++P A+YV KN+FWG
Sbjct: 109  QGAVRGLTASTDGCILISCGTDCTARLWKVPVATMMESDGPSNRSAEPQAIYVGKNAFWG 168

Query: 1036 VDHQWDGDRFATAGAQVDIWDHNRSEPVSTFQWGNDTFTSVRFNPGEPNLLATSDRERNI 857
            VDHQWDG+ FAT GAQVDIW+HNRS+PV++F+WG DT  SVRFNPGEPNLLA S  +R+I
Sbjct: 169  VDHQWDGELFATGGAQVDIWNHNRSQPVNSFEWGTDTVISVRFNPGEPNLLAASASDRSI 228

Query: 856  TLYDLRLSSPVARLKMKTKTNSISWNPMEPMNFTAANEDCNCYSYDARKLDEAKCVHKGH 677
            TLYDLR+SSP  +L M+T+TNSI+WNPMEPMNFTAANEDCNCYS+DARKLDEAKCVHK H
Sbjct: 229  TLYDLRVSSPARKLIMRTRTNSIAWNPMEPMNFTAANEDCNCYSFDARKLDEAKCVHKDH 288

Query: 676  VNAVMDIDYSPTGREFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVFSVKFSCDGTYVL 497
            V+AVMDID+SPTGREFVTGSYDRTVRIF YNGGHSREIYHTKRMQRVF VKFSCDG+Y++
Sbjct: 289  VSAVMDIDFSPTGREFVTGSYDRTVRIFPYNGGHSREIYHTKRMQRVFCVKFSCDGSYII 348

Query: 496  SGSDDTNLRLWKAQASEQLGVVLPRERKKHEYDEAIKNRYKHLPEVKRIVRHKHLPKPIY 317
            SGSDDTNLRLWKA+ASEQLGV+LPRERK+HEY+EA+KNRYKHLPE+KRIVRH+HLPKPIY
Sbjct: 349  SGSDDTNLRLWKAKASEQLGVLLPRERKRHEYNEAVKNRYKHLPEIKRIVRHRHLPKPIY 408

Query: 316  NASKLSRQKIDKERRKDANRRAHSAPGSMPTETVRKRRIIKE 191
             A+++ R   + E+RK+  RRAHS PGS+ TE +RKRRIIKE
Sbjct: 409  KAAEIRRTVTEAEKRKEDRRRAHSTPGSVVTEPLRKRRIIKE 450


>ref|XP_002327907.1| predicted protein [Populus trichocarpa] gi|222837316|gb|EEE75695.1|
            predicted protein [Populus trichocarpa]
          Length = 452

 Score =  736 bits (1901), Expect = 0.0
 Identities = 354/462 (76%), Positives = 401/462 (86%), Gaps = 1/462 (0%)
 Frame = -1

Query: 1573 MRVKTISRSNDDFTRERSQDLLKVFRNYDPNLRTQEKSVEYVRALKAAKLEKIFARPFVG 1394
            M+VK ISRS D+FTRERSQDL +VF N+DPNLRTQEK+VEY RAL AAKL+KIFARPF+G
Sbjct: 1    MKVKVISRSTDEFTRERSQDLQRVFHNFDPNLRTQEKAVEYQRALNAAKLDKIFARPFIG 60

Query: 1393 AMEGHIDGITCMAKNPNHLKGIFSASIDGDIRLWDLATRRTVCQFPGRKGEAQGREFDGH 1214
            AM+GHID ++CMAKNPN+LKGIFS S+DGDIRLWD+A RRTVCQFPG            H
Sbjct: 61   AMDGHIDAVSCMAKNPNYLKGIFSGSMDGDIRLWDIANRRTVCQFPG------------H 108

Query: 1213 QREVMGLTCSTDGRILVSCGVDCTVRLWRVPVAGIMESDD-SFGSSQPLAVYVWKNSFWG 1037
            Q  V GLT STDG  LVSCG DCTVRLW VPVA IM+SD+ S  SS+P AVY+ +N+FW 
Sbjct: 109  QGAVRGLTASTDGSTLVSCGTDCTVRLWNVPVATIMDSDNLSDCSSEPRAVYMGENAFWA 168

Query: 1036 VDHQWDGDRFATAGAQVDIWDHNRSEPVSTFQWGNDTFTSVRFNPGEPNLLATSDRERNI 857
            VDHQW+GD FATAGAQVDIW+HNRS+PV++F+WG D+  SVRFNPGEPNLL TS  +R+I
Sbjct: 169  VDHQWNGDLFATAGAQVDIWNHNRSQPVNSFKWGTDSVISVRFNPGEPNLLVTSASDRSI 228

Query: 856  TLYDLRLSSPVARLKMKTKTNSISWNPMEPMNFTAANEDCNCYSYDARKLDEAKCVHKGH 677
             LYDLR+SSP  +L M+TKTNSISWNPMEPMNFTAANEDCNCYSYDARKL+EAKCVHK H
Sbjct: 229  ILYDLRVSSPARKLIMRTKTNSISWNPMEPMNFTAANEDCNCYSYDARKLEEAKCVHKDH 288

Query: 676  VNAVMDIDYSPTGREFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVFSVKFSCDGTYVL 497
            V+AVMDID+SPTGREFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVF VKFSCD +YV+
Sbjct: 289  VSAVMDIDFSPTGREFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVFCVKFSCDASYVI 348

Query: 496  SGSDDTNLRLWKAQASEQLGVVLPRERKKHEYDEAIKNRYKHLPEVKRIVRHKHLPKPIY 317
            SGSDDTNLRLWKA+ASEQLGV+LPRE+K+HEY+EA+KNRYKHLPEVKRIVRH+HLPKPIY
Sbjct: 349  SGSDDTNLRLWKAKASEQLGVLLPREQKRHEYNEALKNRYKHLPEVKRIVRHRHLPKPIY 408

Query: 316  NASKLSRQKIDKERRKDANRRAHSAPGSMPTETVRKRRIIKE 191
             A  L R  I+ ERRKD  R+AHSAPGS+ TE +RKRRIIKE
Sbjct: 409  KAGVLRRVMIEAERRKDQRRKAHSAPGSIVTEPMRKRRIIKE 450


>ref|XP_002310410.1| predicted protein [Populus trichocarpa] gi|222853313|gb|EEE90860.1|
            predicted protein [Populus trichocarpa]
          Length = 452

 Score =  730 bits (1885), Expect = 0.0
 Identities = 350/462 (75%), Positives = 398/462 (86%), Gaps = 1/462 (0%)
 Frame = -1

Query: 1573 MRVKTISRSNDDFTRERSQDLLKVFRNYDPNLRTQEKSVEYVRALKAAKLEKIFARPFVG 1394
            M+VK ISRS D+FTRERSQDL +VF N+DPNLRTQEK+VEY RAL AAKL+KIFARPF+G
Sbjct: 1    MKVKVISRSTDEFTRERSQDLQRVFHNFDPNLRTQEKAVEYQRALNAAKLDKIFARPFIG 60

Query: 1393 AMEGHIDGITCMAKNPNHLKGIFSASIDGDIRLWDLATRRTVCQFPGRKGEAQGREFDGH 1214
            AM+GHID ++CMAKNPN+LKGIFS S+DGDIRLWD+A RRTVC+FPG            H
Sbjct: 61   AMDGHIDAVSCMAKNPNYLKGIFSGSMDGDIRLWDIANRRTVCRFPG------------H 108

Query: 1213 QREVMGLTCSTDGRILVSCGVDCTVRLWRVPVAGIMESDDSFG-SSQPLAVYVWKNSFWG 1037
            Q  V GLT STDG  LVSCG DCTVRLW VPVA IMES +S   SS+P AVY+ +N++W 
Sbjct: 109  QGAVRGLTASTDGSTLVSCGTDCTVRLWNVPVATIMESGNSSDCSSEPRAVYMGENAYWA 168

Query: 1036 VDHQWDGDRFATAGAQVDIWDHNRSEPVSTFQWGNDTFTSVRFNPGEPNLLATSDRERNI 857
            VDHQW GD FATAGAQVDIW+HNRS+PV++F+WG D+  SVRFNPGEPNLLATS  +R+I
Sbjct: 169  VDHQWSGDLFATAGAQVDIWNHNRSQPVNSFKWGTDSVISVRFNPGEPNLLATSASDRSI 228

Query: 856  TLYDLRLSSPVARLKMKTKTNSISWNPMEPMNFTAANEDCNCYSYDARKLDEAKCVHKGH 677
             LYDLR+SSP  +L M+TKTNSISWNPMEPMNFTAANEDCNCYSYDARK DEAKCVHK H
Sbjct: 229  MLYDLRVSSPARKLIMRTKTNSISWNPMEPMNFTAANEDCNCYSYDARKFDEAKCVHKDH 288

Query: 676  VNAVMDIDYSPTGREFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVFSVKFSCDGTYVL 497
            V+AVMDID+SPTGREFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVF VKFSCD +YV+
Sbjct: 289  VSAVMDIDFSPTGREFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVFCVKFSCDASYVI 348

Query: 496  SGSDDTNLRLWKAQASEQLGVVLPRERKKHEYDEAIKNRYKHLPEVKRIVRHKHLPKPIY 317
            SGSDDTNLRLWKA+ASEQLG++LPRE+++HEY+EA+K RYKHLPEVKRIVRH+HLPKPIY
Sbjct: 349  SGSDDTNLRLWKAKASEQLGILLPREQRRHEYNEALKTRYKHLPEVKRIVRHRHLPKPIY 408

Query: 316  NASKLSRQKIDKERRKDANRRAHSAPGSMPTETVRKRRIIKE 191
             A  L R  I+ ERRKD  R+AHSAPGS+ TE +RKRRIIKE
Sbjct: 409  KAGVLRRVMIEAERRKDHRRKAHSAPGSIVTEPMRKRRIIKE 450


>ref|XP_004144522.1| PREDICTED: DDB1- and CUL4-associated factor 13-like [Cucumis sativus]
          Length = 451

 Score =  725 bits (1872), Expect = 0.0
 Identities = 338/461 (73%), Positives = 397/461 (86%)
 Frame = -1

Query: 1573 MRVKTISRSNDDFTRERSQDLLKVFRNYDPNLRTQEKSVEYVRALKAAKLEKIFARPFVG 1394
            M+VK ISRS D+FTRERS DL +VFRN+DP+LRTQEK+VEYVRA+ AAKL+K+FA+PF+G
Sbjct: 1    MKVKVISRSTDEFTRERSHDLQRVFRNFDPSLRTQEKAVEYVRAVNAAKLDKMFAKPFIG 60

Query: 1393 AMEGHIDGITCMAKNPNHLKGIFSASIDGDIRLWDLATRRTVCQFPGRKGEAQGREFDGH 1214
            AM+GH+D ++CMAKNPNHLKGIFS S+DGDIRLWD+A RRTV QFPG            H
Sbjct: 61   AMDGHMDSVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVYQFPG------------H 108

Query: 1213 QREVMGLTCSTDGRILVSCGVDCTVRLWRVPVAGIMESDDSFGSSQPLAVYVWKNSFWGV 1034
            Q  V GLT STDGRIL+SCG DCTVRLW VPV  +   + S  SS+PLAVYVWKN+FW +
Sbjct: 109  QGAVRGLTASTDGRILISCGTDCTVRLWNVPVPTLNSYETSNNSSEPLAVYVWKNAFWAI 168

Query: 1033 DHQWDGDRFATAGAQVDIWDHNRSEPVSTFQWGNDTFTSVRFNPGEPNLLATSDRERNIT 854
            DHQWDG+ FATAGAQ+DIWDHNRS+PVS+++WG D+  SVRFNPGEPN+LATS  +R+I 
Sbjct: 169  DHQWDGNLFATAGAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIA 228

Query: 853  LYDLRLSSPVARLKMKTKTNSISWNPMEPMNFTAANEDCNCYSYDARKLDEAKCVHKGHV 674
            LYDLR+SSP  ++ M+TKTNSI WNP EPMNFTAANEDCNCYSYD+RKLDEAKCVH+ HV
Sbjct: 229  LYDLRMSSPARKVIMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHV 288

Query: 673  NAVMDIDYSPTGREFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVFSVKFSCDGTYVLS 494
            +AVMDID+SP+GREFVTGSYDRT+RIF YNGGHSREIYHTKRMQRVF V+FSCD +YV+S
Sbjct: 289  SAVMDIDFSPSGREFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVIS 348

Query: 493  GSDDTNLRLWKAQASEQLGVVLPRERKKHEYDEAIKNRYKHLPEVKRIVRHKHLPKPIYN 314
            GSDDTNLRLWKA+ASEQLGV+LPRE++KHEY EA+KNRYKHLPEVKRIVRH+HLPKPI+ 
Sbjct: 349  GSDDTNLRLWKAKASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFK 408

Query: 313  ASKLSRQKIDKERRKDANRRAHSAPGSMPTETVRKRRIIKE 191
            A+ L R  ID ERRK+  R+AHSAPGS+ T  +R+RRIIKE
Sbjct: 409  AAALRRTIIDAERRKEERRKAHSAPGSISTVPLRRRRIIKE 449