BLASTX nr result

ID: Coptis24_contig00015096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015096
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19788.3| unnamed protein product [Vitis vinifera]              185   3e-45
ref|XP_002279779.1| PREDICTED: coatomer subunit alpha-1 [Vitis v...   185   3e-45
ref|NP_001051056.1| Os03g0711400 [Oryza sativa Japonica Group] g...   182   2e-44
sp|Q9AUR7.1|COPA2_ORYSJ RecName: Full=Coatomer subunit alpha-2; ...   182   2e-44
gb|EEC76050.1| hypothetical protein OsI_13244 [Oryza sativa Indi...   182   2e-44

>emb|CBI19788.3| unnamed protein product [Vitis vinifera]
          Length = 1062

 Score =  185 bits (470), Expect = 3e-45
 Identities = 93/123 (75%), Positives = 105/123 (85%), Gaps = 2/123 (1%)
 Frame = -1

Query: 363 MNLIAVGHDSGMIVFKLERERPAFSVSGVSLYYVKDRFLRIYGFITQKDTQGIPIRRPGS 184
           MNL+A GHDSGMIVFKLERERPAFSVSG  LYYVKDRFLR+Y F TQKD Q IPIRRPGS
Sbjct: 302 MNLLAAGHDSGMIVFKLERERPAFSVSGDCLYYVKDRFLRLYEFSTQKDAQVIPIRRPGS 361

Query: 183 LSLNQSPKTLSYNPTENAVLLSSEVDGGSYELYVLPKD--GRVDSAQDVMIGLGVSAVFV 10
            +LNQ P+TLSY+PTENAVL+ S+VDGGSYELY++P+D  GR D+ QD   G+G SAVFV
Sbjct: 362 AALNQGPRTLSYSPTENAVLICSDVDGGSYELYIVPRDSIGRGDTVQDAKRGVGGSAVFV 421

Query: 9   ARN 1
           ARN
Sbjct: 422 ARN 424


>ref|XP_002279779.1| PREDICTED: coatomer subunit alpha-1 [Vitis vinifera]
          Length = 1217

 Score =  185 bits (470), Expect = 3e-45
 Identities = 93/123 (75%), Positives = 105/123 (85%), Gaps = 2/123 (1%)
 Frame = -1

Query: 363 MNLIAVGHDSGMIVFKLERERPAFSVSGVSLYYVKDRFLRIYGFITQKDTQGIPIRRPGS 184
           MNL+A GHDSGMIVFKLERERPAFSVSG  LYYVKDRFLR+Y F TQKD Q IPIRRPGS
Sbjct: 302 MNLLAAGHDSGMIVFKLERERPAFSVSGDCLYYVKDRFLRLYEFSTQKDAQVIPIRRPGS 361

Query: 183 LSLNQSPKTLSYNPTENAVLLSSEVDGGSYELYVLPKD--GRVDSAQDVMIGLGVSAVFV 10
            +LNQ P+TLSY+PTENAVL+ S+VDGGSYELY++P+D  GR D+ QD   G+G SAVFV
Sbjct: 362 AALNQGPRTLSYSPTENAVLICSDVDGGSYELYIVPRDSIGRGDTVQDAKRGVGGSAVFV 421

Query: 9   ARN 1
           ARN
Sbjct: 422 ARN 424


>ref|NP_001051056.1| Os03g0711400 [Oryza sativa Japonica Group]
           gi|75333115|sp|Q9AUR8.1|COPA1_ORYSJ RecName:
           Full=Coatomer subunit alpha-1; AltName: Full=Alpha-coat
           protein 1; Short=Alpha-COP 1
           gi|13324786|gb|AAK18834.1|AC082645_4 putative alpha-coat
           protein [Oryza sativa Japonica Group]
           gi|108710718|gb|ABF98513.1| Coatomer alpha subunit,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113549527|dbj|BAF12970.1| Os03g0711400 [Oryza sativa
           Japonica Group] gi|125587675|gb|EAZ28339.1| hypothetical
           protein OsJ_12317 [Oryza sativa Japonica Group]
           gi|215712405|dbj|BAG94532.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 1218

 Score =  182 bits (462), Expect = 2e-44
 Identities = 92/123 (74%), Positives = 104/123 (84%), Gaps = 2/123 (1%)
 Frame = -1

Query: 363 MNLIAVGHDSGMIVFKLERERPAFSVSGVSLYYVKDRFLRIYGFITQKDTQGIPIRRPGS 184
           MNL+A GHDSGMIVFKLERERPAFSVSG +++YVKDRFLR + F TQK+ Q  PIRRPGS
Sbjct: 302 MNLLAAGHDSGMIVFKLERERPAFSVSGDTVFYVKDRFLRFFEFTTQKEVQLAPIRRPGS 361

Query: 183 LSLNQSPKTLSYNPTENAVLLSSEVDGGSYELYVLPKD--GRVDSAQDVMIGLGVSAVFV 10
           +SLNQSPKTLSY+PTENAVL+ S+VDGGSYELY++PKD  GR D  QD   G G SAVFV
Sbjct: 362 VSLNQSPKTLSYSPTENAVLICSDVDGGSYELYIVPKDSAGRADYLQDAKKGAGGSAVFV 421

Query: 9   ARN 1
           ARN
Sbjct: 422 ARN 424


>sp|Q9AUR7.1|COPA2_ORYSJ RecName: Full=Coatomer subunit alpha-2; AltName: Full=Alpha-coat
           protein 2; Short=Alpha-COP 2
           gi|13324789|gb|AAK18837.1|AC082645_7 putative alpha-coat
           protein [Oryza sativa Japonica Group]
           gi|108710719|gb|ABF98514.1| Coatomer alpha subunit,
           putative, expressed [Oryza sativa Japonica Group]
           gi|125545472|gb|EAY91611.1| hypothetical protein
           OsI_13245 [Oryza sativa Indica Group]
           gi|125587676|gb|EAZ28340.1| hypothetical protein
           OsJ_12318 [Oryza sativa Japonica Group]
          Length = 1218

 Score =  182 bits (462), Expect = 2e-44
 Identities = 92/123 (74%), Positives = 104/123 (84%), Gaps = 2/123 (1%)
 Frame = -1

Query: 363 MNLIAVGHDSGMIVFKLERERPAFSVSGVSLYYVKDRFLRIYGFITQKDTQGIPIRRPGS 184
           MNL+A GHDSGMIVFKLERERPAFSVSG +++YVKDRFLR + F TQK+ Q  PIRRPGS
Sbjct: 302 MNLLAAGHDSGMIVFKLERERPAFSVSGDTVFYVKDRFLRFFEFTTQKEVQLAPIRRPGS 361

Query: 183 LSLNQSPKTLSYNPTENAVLLSSEVDGGSYELYVLPKD--GRVDSAQDVMIGLGVSAVFV 10
           +SLNQSPKTLSY+PTENAVL+ S+VDGGSYELY++PKD  GR D  QD   G G SAVFV
Sbjct: 362 VSLNQSPKTLSYSPTENAVLICSDVDGGSYELYIVPKDSAGRADYLQDAKKGAGGSAVFV 421

Query: 9   ARN 1
           ARN
Sbjct: 422 ARN 424


>gb|EEC76050.1| hypothetical protein OsI_13244 [Oryza sativa Indica Group]
          Length = 904

 Score =  182 bits (462), Expect = 2e-44
 Identities = 92/123 (74%), Positives = 104/123 (84%), Gaps = 2/123 (1%)
 Frame = -1

Query: 363 MNLIAVGHDSGMIVFKLERERPAFSVSGVSLYYVKDRFLRIYGFITQKDTQGIPIRRPGS 184
           MNL+A GHDSGMIVFKLERERPAFSVSG +++YVKDRFLR + F TQK+ Q  PIRRPGS
Sbjct: 164 MNLLAAGHDSGMIVFKLERERPAFSVSGDTVFYVKDRFLRFFEFTTQKEVQLAPIRRPGS 223

Query: 183 LSLNQSPKTLSYNPTENAVLLSSEVDGGSYELYVLPKD--GRVDSAQDVMIGLGVSAVFV 10
           +SLNQSPKTLSY+PTENAVL+ S+VDGGSYELY++PKD  GR D  QD   G G SAVFV
Sbjct: 224 VSLNQSPKTLSYSPTENAVLICSDVDGGSYELYIVPKDSAGRADYLQDAKKGAGGSAVFV 283

Query: 9   ARN 1
           ARN
Sbjct: 284 ARN 286


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