BLASTX nr result

ID: Coptis24_contig00015071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015071
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510557.1| Receptor protein kinase CLAVATA1 precursor, ...   201   5e-50
ref|XP_002279563.1| PREDICTED: receptor protein kinase CLAVATA1-...   200   9e-50
ref|XP_002307734.1| predicted protein [Populus trichocarpa] gi|2...   194   6e-48
emb|CAD42181.1| serine-threonine protein kinase [Pisum sativum]       192   2e-47
ref|XP_002300697.1| predicted protein [Populus trichocarpa] gi|2...   191   5e-47

>ref|XP_002510557.1| Receptor protein kinase CLAVATA1 precursor, putative [Ricinus
            communis] gi|223551258|gb|EEF52744.1| Receptor protein
            kinase CLAVATA1 precursor, putative [Ricinus communis]
          Length = 985

 Score =  201 bits (511), Expect = 5e-50
 Identities = 95/116 (81%), Positives = 106/116 (91%)
 Frame = -1

Query: 348  RKVRNSKSWKLTAFQRLEFTVEDVLECLKEENFIGQGGAGTVYHGAMPDGNDVAIKRLVG 169
            +++  S++WKLTAFQRL+F  EDVLECLKEEN IG+GGAG VY G+MPDG DVAIKRLVG
Sbjct: 664  KRLEKSRAWKLTAFQRLDFKAEDVLECLKEENIIGKGGAGIVYRGSMPDGADVAIKRLVG 723

Query: 168  LSSGKNDHGFSAEIRTLGRIRHRNIVRLLGYVSNKDTNLLLYEYMPNGSLGELLHG 1
              SG+NDHGFSAEI+TLGRIRHRNIVRLLGYVSN+DTNLLLYEYMPNGSLGELLHG
Sbjct: 724  RGSGRNDHGFSAEIQTLGRIRHRNIVRLLGYVSNRDTNLLLYEYMPNGSLGELLHG 779


>ref|XP_002279563.1| PREDICTED: receptor protein kinase CLAVATA1-like [Vitis vinifera]
          Length = 984

 Score =  200 bits (509), Expect = 9e-50
 Identities = 96/116 (82%), Positives = 106/116 (91%)
 Frame = -1

Query: 348  RKVRNSKSWKLTAFQRLEFTVEDVLECLKEENFIGQGGAGTVYHGAMPDGNDVAIKRLVG 169
            +K + SK+WKLTAFQRL+F  EDVLECLKEEN IG+GGAG VY G+MPDG DVAIKRLVG
Sbjct: 669  KKHQKSKAWKLTAFQRLDFKAEDVLECLKEENIIGKGGAGIVYRGSMPDGVDVAIKRLVG 728

Query: 168  LSSGKNDHGFSAEIRTLGRIRHRNIVRLLGYVSNKDTNLLLYEYMPNGSLGELLHG 1
              SG++DHGFSAEI+TLGRIRHRNIVRLLGYVSNKDTNLLLYEYMPNGSLGE+LHG
Sbjct: 729  RGSGRSDHGFSAEIQTLGRIRHRNIVRLLGYVSNKDTNLLLYEYMPNGSLGEILHG 784


>ref|XP_002307734.1| predicted protein [Populus trichocarpa]
            gi|224144099|ref|XP_002336108.1| predicted protein
            [Populus trichocarpa] gi|222857183|gb|EEE94730.1|
            predicted protein [Populus trichocarpa]
            gi|222872880|gb|EEF10011.1| predicted protein [Populus
            trichocarpa]
          Length = 973

 Score =  194 bits (493), Expect = 6e-48
 Identities = 94/117 (80%), Positives = 107/117 (91%), Gaps = 1/117 (0%)
 Frame = -1

Query: 348  RKVRNSKSWKLTAFQRLEFTVEDVLECLKEENFIGQGGAGTVYHGAMPDGND-VAIKRLV 172
            ++++ S++WKLTAFQRL+F  EDVLECLKEEN IG+GGAG VY G+MP+G D VAIKRLV
Sbjct: 657  KRLQKSRAWKLTAFQRLDFKAEDVLECLKEENIIGKGGAGIVYRGSMPEGVDHVAIKRLV 716

Query: 171  GLSSGKNDHGFSAEIRTLGRIRHRNIVRLLGYVSNKDTNLLLYEYMPNGSLGELLHG 1
            G  SG++DHGFSAEI+TLGRIRHRNIVRLLGYVSNKDTNLLLYEYMPNGSLGELLHG
Sbjct: 717  GRGSGRSDHGFSAEIQTLGRIRHRNIVRLLGYVSNKDTNLLLYEYMPNGSLGELLHG 773


>emb|CAD42181.1| serine-threonine protein kinase [Pisum sativum]
          Length = 976

 Score =  192 bits (488), Expect = 2e-47
 Identities = 91/116 (78%), Positives = 103/116 (88%)
 Frame = -1

Query: 348  RKVRNSKSWKLTAFQRLEFTVEDVLECLKEENFIGQGGAGTVYHGAMPDGNDVAIKRLVG 169
            RK+  +K+WKLTAFQRL+F  E+V+ECLKEEN IG+GGAG VY G+MP+G DVAIKRLVG
Sbjct: 659  RKLHMAKAWKLTAFQRLDFKAEEVVECLKEENIIGKGGAGIVYRGSMPNGTDVAIKRLVG 718

Query: 168  LSSGKNDHGFSAEIRTLGRIRHRNIVRLLGYVSNKDTNLLLYEYMPNGSLGELLHG 1
              SG+ND+GF AEI TLGRIRHRNI+RLLGYVSNKDTNLLLYEYMPNGSLGE LHG
Sbjct: 719  QGSGRNDYGFKAEIETLGRIRHRNIMRLLGYVSNKDTNLLLYEYMPNGSLGEWLHG 774


>ref|XP_002300697.1| predicted protein [Populus trichocarpa] gi|222842423|gb|EEE79970.1|
           predicted protein [Populus trichocarpa]
          Length = 939

 Score =  191 bits (485), Expect = 5e-47
 Identities = 93/117 (79%), Positives = 105/117 (89%), Gaps = 1/117 (0%)
 Frame = -1

Query: 348 RKVRNSKSWKLTAFQRLEFTVEDVLECLKEENFIGQGGAGTVYHGAMPDGND-VAIKRLV 172
           + ++ S++WKLTAFQRL+F  EDVLECLKEEN IG+GGAG VY G+M +G D VAIKRLV
Sbjct: 623 KNLQKSRAWKLTAFQRLDFKAEDVLECLKEENIIGKGGAGIVYRGSMTEGIDHVAIKRLV 682

Query: 171 GLSSGKNDHGFSAEIRTLGRIRHRNIVRLLGYVSNKDTNLLLYEYMPNGSLGELLHG 1
           G  +G+NDHGFSAEI+TLGRIRHRNIVRLLGYVSNKDTNLLLYEYMPNGSLGELLHG
Sbjct: 683 GRGTGRNDHGFSAEIQTLGRIRHRNIVRLLGYVSNKDTNLLLYEYMPNGSLGELLHG 739


Top