BLASTX nr result

ID: Coptis24_contig00015067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015067
         (1070 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266146.2| PREDICTED: 5-formyltetrahydrofolate cyclo-li...   286   8e-75
ref|XP_004155072.1| PREDICTED: 5-formyltetrahydrofolate cyclo-li...   281   1e-73
emb|CBI15306.3| unnamed protein product [Vitis vinifera]              280   3e-73
ref|XP_004138292.1| PREDICTED: 5-formyltetrahydrofolate cyclo-li...   280   6e-73
ref|XP_002318620.1| 5-formyltetrahydrofolate cyclo-ligase [Popul...   280   6e-73

>ref|XP_002266146.2| PREDICTED: 5-formyltetrahydrofolate cyclo-ligase [Vitis vinifera]
          Length = 273

 Score =  286 bits (731), Expect = 8e-75
 Identities = 147/246 (59%), Positives = 187/246 (76%), Gaps = 5/246 (2%)
 Frame = -2

Query: 937 PESLVTMT-----SKDPNLDAIFDKKRAVRSKVRKELKGMSPTQRAEQDAAIQKIILESS 773
           P S+VTMT     S + +L+A+F +K+ +RS VRK LKGM P+ R+++D A+Q IILE+ 
Sbjct: 26  PRSIVTMTNNTHQSSNTHLEAVFKQKKILRSSVRKALKGMDPSSRSQEDNAVQNIILEAP 85

Query: 772 WYKASDRLCAYISCNALREVDTSEILSDILCHHQKDGRAHIRKKLYVPRVEDKNSYMRML 593
           W+++S RLCAYISC++LREVDTS++LS+IL +  KDG   + KKLYVPRVEDKNSYMRML
Sbjct: 86  WFRSSQRLCAYISCSSLREVDTSKVLSEILQNPAKDGHTQMGKKLYVPRVEDKNSYMRML 145

Query: 592 YISSTEDLVANSMSILEPSVVDPDGNQRENVMEANDPVDLLLLPXXXXXXXXXXXXXXXX 413
            I+  +DL++NSM+ILEP+ VD DGN+RE+VM+A DPVDLLLLP                
Sbjct: 146 NITHMDDLISNSMNILEPAPVDGDGNEREDVMQATDPVDLLLLPGLAFDKSGRRLGRGGG 205

Query: 412 XXDTFLKKYQELSLERKWKQPLLVALSYNLQILDDGLIPVTPSDVLVDALVSPTGVIPIS 233
             D FLK Y EL  ER WKQPLLVALSY++QI+D+G+IPVTP+DV VDALVSP GVIPI+
Sbjct: 206 YYDAFLKNYLELVKERNWKQPLLVALSYSVQIMDEGVIPVTPNDVPVDALVSPAGVIPIT 265

Query: 232 PAAIER 215
            AA ER
Sbjct: 266 TAAQER 271


>ref|XP_004155072.1| PREDICTED: 5-formyltetrahydrofolate cyclo-ligase-like [Cucumis
            sativus]
          Length = 337

 Score =  281 bits (720), Expect = 1e-73
 Identities = 150/286 (52%), Positives = 194/286 (67%), Gaps = 8/286 (2%)
 Frame = -2

Query: 1045 APLLLPHRAKLAAMTQKLYTSTQQLLFSPRL-----IIRSFPESLVTMTSKDPNLDA--- 890
            AP+L  ++  L      L+   Q   F   L         +P+     + K  N D    
Sbjct: 53   APMLRNYKPLLPIAANSLFNHIQSSAFQQSLPPLSRFSSGYPKMATNESIKPENEDQLKH 112

Query: 889  IFDKKRAVRSKVRKELKGMSPTQRAEQDAAIQKIILESSWYKASDRLCAYISCNALREVD 710
            IFD+KR +RS VRK LK M P+ R+++D  IQ I+LE+ W+K+S RLCAY+SC+ALREVD
Sbjct: 113  IFDQKRVLRSSVRKALKAMDPSFRSQEDNVIQSIVLEAPWFKSSQRLCAYVSCSALREVD 172

Query: 709  TSEILSDILCHHQKDGRAHIRKKLYVPRVEDKNSYMRMLYISSTEDLVANSMSILEPSVV 530
            TS +LS+IL H  KDG +   KK+YVPRVEDKNS+MRM  IS  +DL+ANSM+ILEP+ V
Sbjct: 173  TSRLLSEILQHPPKDGHS---KKIYVPRVEDKNSHMRMFNISRMDDLIANSMNILEPAPV 229

Query: 529  DPDGNQRENVMEANDPVDLLLLPXXXXXXXXXXXXXXXXXXDTFLKKYQELSLERKWKQP 350
            D DGN+RE+VM+  DP+DL LLP                  DTFLKKYQEL+  R WKQP
Sbjct: 230  DGDGNEREDVMQTKDPIDLFLLPGLAFDKSGRRLGRGGGYYDTFLKKYQELAKARNWKQP 289

Query: 349  LLVALSYNLQILDDGLIPVTPSDVLVDALVSPTGVIPISPAAIERM 212
            LLVALSY++QI+D+G+IP+TP+DVLVDALVSP+GVIPIS A +++M
Sbjct: 290  LLVALSYSVQIMDEGIIPLTPNDVLVDALVSPSGVIPISSAGLDKM 335


>emb|CBI15306.3| unnamed protein product [Vitis vinifera]
          Length = 242

 Score =  280 bits (717), Expect = 3e-73
 Identities = 142/236 (60%), Positives = 181/236 (76%)
 Frame = -2

Query: 922 TMTSKDPNLDAIFDKKRAVRSKVRKELKGMSPTQRAEQDAAIQKIILESSWYKASDRLCA 743
           T  S + +L+A+F +K+ +RS VRK LKGM P+ R+++D A+Q IILE+ W+++S RLCA
Sbjct: 5   THQSSNTHLEAVFKQKKILRSSVRKALKGMDPSSRSQEDNAVQNIILEAPWFRSSQRLCA 64

Query: 742 YISCNALREVDTSEILSDILCHHQKDGRAHIRKKLYVPRVEDKNSYMRMLYISSTEDLVA 563
           YISC++LREVDTS++LS+IL +  KDG   + KKLYVPRVEDKNSYMRML I+  +DL++
Sbjct: 65  YISCSSLREVDTSKVLSEILQNPAKDGHTQMGKKLYVPRVEDKNSYMRMLNITHMDDLIS 124

Query: 562 NSMSILEPSVVDPDGNQRENVMEANDPVDLLLLPXXXXXXXXXXXXXXXXXXDTFLKKYQ 383
           NSM+ILEP+ VD DGN+RE+VM+A DPVDLLLLP                  D FLK Y 
Sbjct: 125 NSMNILEPAPVDGDGNEREDVMQATDPVDLLLLPGLAFDKSGRRLGRGGGYYDAFLKNYL 184

Query: 382 ELSLERKWKQPLLVALSYNLQILDDGLIPVTPSDVLVDALVSPTGVIPISPAAIER 215
           EL  ER WKQPLLVALSY++QI+D+G+IPVTP+DV VDALVSP GVIPI+ AA ER
Sbjct: 185 ELVKERNWKQPLLVALSYSVQIMDEGVIPVTPNDVPVDALVSPAGVIPITTAAQER 240


>ref|XP_004138292.1| PREDICTED: 5-formyltetrahydrofolate cyclo-ligase-like [Cucumis
            sativus]
          Length = 337

 Score =  280 bits (715), Expect = 6e-73
 Identities = 149/286 (52%), Positives = 193/286 (67%), Gaps = 8/286 (2%)
 Frame = -2

Query: 1045 APLLLPHRAKLAAMTQKLYTSTQQLLFSPRL-----IIRSFPESLVTMTSKDPNLDA--- 890
            AP+L  ++  L      L+   Q   F   L         +P+     + K  N D    
Sbjct: 53   APMLRNYKPLLPIAANSLFNHIQSSAFQQSLPPLSRFSSGYPKMATNESIKPENEDQLKH 112

Query: 889  IFDKKRAVRSKVRKELKGMSPTQRAEQDAAIQKIILESSWYKASDRLCAYISCNALREVD 710
            IFD+KR +RS VRK LK M P+ R+++D  IQ I+LE+ W+K+S RLCAY+SC+ALREVD
Sbjct: 113  IFDQKRVLRSSVRKALKAMDPSFRSQEDNVIQSIVLEAPWFKSSQRLCAYVSCSALREVD 172

Query: 709  TSEILSDILCHHQKDGRAHIRKKLYVPRVEDKNSYMRMLYISSTEDLVANSMSILEPSVV 530
            TS +LS+IL H  KDG +   KK+YVPRVEDKNS+MRM  IS  +DL+ANSM+ILEP+ V
Sbjct: 173  TSRLLSEILQHPPKDGHS---KKIYVPRVEDKNSHMRMFNISRMDDLIANSMNILEPAPV 229

Query: 529  DPDGNQRENVMEANDPVDLLLLPXXXXXXXXXXXXXXXXXXDTFLKKYQELSLERKWKQP 350
            D DGN+RE+VM+  DP+DL LLP                  DTFLK YQEL+  R WKQP
Sbjct: 230  DGDGNEREDVMQTKDPIDLFLLPGLAFDKSGRRLGRGGGYYDTFLKNYQELAKARNWKQP 289

Query: 349  LLVALSYNLQILDDGLIPVTPSDVLVDALVSPTGVIPISPAAIERM 212
            LLVALSY++QI+D+G+IP+TP+DVLVDALVSP+GVIPIS A +++M
Sbjct: 290  LLVALSYSVQIMDEGIIPLTPNDVLVDALVSPSGVIPISSAGLDKM 335


>ref|XP_002318620.1| 5-formyltetrahydrofolate cyclo-ligase [Populus trichocarpa]
           gi|222859293|gb|EEE96840.1| 5-formyltetrahydrofolate
           cyclo-ligase [Populus trichocarpa]
          Length = 276

 Score =  280 bits (715), Expect = 6e-73
 Identities = 144/230 (62%), Positives = 175/230 (76%)
 Frame = -2

Query: 901 NLDAIFDKKRAVRSKVRKELKGMSPTQRAEQDAAIQKIILESSWYKASDRLCAYISCNAL 722
           NLD IF +K+ +RSKVRK LK M P+ R+++D AIQ ++LE+ W+K+S RLCAYI+C+AL
Sbjct: 45  NLDGIFKQKQVLRSKVRKSLKSMDPSLRSQEDDAIQSLVLEAPWFKSSQRLCAYITCSAL 104

Query: 721 REVDTSEILSDILCHHQKDGRAHIRKKLYVPRVEDKNSYMRMLYISSTEDLVANSMSILE 542
           REVDTS++LS IL +  KDG     KKLYVPRVEDKNS+MRML ISS +DL+ANSM ILE
Sbjct: 105 REVDTSKLLSQILQNPTKDGSVENAKKLYVPRVEDKNSHMRMLNISSMDDLIANSMDILE 164

Query: 541 PSVVDPDGNQRENVMEANDPVDLLLLPXXXXXXXXXXXXXXXXXXDTFLKKYQELSLERK 362
           P+ VD  GN RE+VM+ANDPVDL LLP                  DTFL+KYQEL+ ER 
Sbjct: 165 PAPVDQHGNAREDVMQANDPVDLFLLPGLAFDKSGRRLGRGGGYYDTFLRKYQELAEERD 224

Query: 361 WKQPLLVALSYNLQILDDGLIPVTPSDVLVDALVSPTGVIPISPAAIERM 212
           W+QPLLVALSY+LQI+DDG IPVT +D+ VD LVSP GVIPIS AA+ RM
Sbjct: 225 WRQPLLVALSYSLQIIDDGAIPVTLNDLPVDVLVSPAGVIPISQAALNRM 274


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