BLASTX nr result

ID: Coptis24_contig00015063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015063
         (624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACU16688.1| unknown [Glycine max]                                   77   3e-12
gb|ACU13696.1| unknown [Glycine max]                                   61   1e-07
ref|XP_004138041.1| PREDICTED: uncharacterized protein LOC101212...    57   2e-06

>gb|ACU16688.1| unknown [Glycine max]
          Length = 70

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 35/65 (53%), Positives = 46/65 (70%)
 Frame = -2

Query: 362 VNTYGNKKDSNKPKENDTVNYNRRHTCLHVTKLHHPSFPGKLKQ*SWL*QHKQHHCYYHW 183
           ++T  NKKD N+ KE+D V+ +R  T LHV KL+H + P +LKQ +   QHKQHHCY+HW
Sbjct: 1   MHTNSNKKDGNETKEDDCVDQDRNCTGLHVPKLYHSAPPRQLKQKTRAKQHKQHHCYHHW 60

Query: 182 PPICH 168
            PI H
Sbjct: 61  TPIRH 65


>gb|ACU13696.1| unknown [Glycine max]
          Length = 107

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 31/77 (40%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
 Frame = -2

Query: 362 VNTYGN--KKDSNKPKENDTVNYNRRHTCLHVTKLHHPSFPGKLKQ*SWL*QHKQHHCYY 189
           V+ Y N  ++D+NK K  D +N     TCL V KL+H +F   L Q  W  + ++HH + 
Sbjct: 17  VHVYSNSHQEDTNKSKVEDGMNQYGHSTCLKVAKLYHFAFTRNLDQQPWSQEDEEHHRHK 76

Query: 188 HWPPICHPLSFFLLQPL 138
           +WPPI H L  F L  L
Sbjct: 77  NWPPISHDLHLFFLLSL 93


>ref|XP_004138041.1| PREDICTED: uncharacterized protein LOC101212373 [Cucumis sativus]
           gi|449520509|ref|XP_004167276.1| PREDICTED:
           uncharacterized LOC101212373 [Cucumis sativus]
          Length = 69

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/69 (49%), Positives = 35/69 (50%)
 Frame = +3

Query: 168 MADGGPVIIAVXXXXXXXXXXXXXXXXKGRVVEFGNMQTSVASIVVHCXXXXXXXXXXXX 347
           MAD GPVIIAV                KGRVVEFGNMQTS ASI+VH             
Sbjct: 1   MADWGPVIIAVVLFVLLSPGLLFQIPAKGRVVEFGNMQTSGASILVHAIIYFGLITIFLI 60

Query: 348 XXXVHIYTG 374
              VHIYTG
Sbjct: 61  AIGVHIYTG 69


Top