BLASTX nr result

ID: Coptis24_contig00015061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015061
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279833.1| PREDICTED: uncharacterized protein LOC100245...    80   2e-29
ref|XP_003531383.1| PREDICTED: uncharacterized protein LOC100785...    78   5e-29
ref|XP_002310603.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-28
ref|XP_002307131.1| predicted protein [Populus trichocarpa] gi|1...    75   6e-28
gb|ACK44531.1| AT5G09960-like protein [Arabidopsis arenosa]            78   1e-27

>ref|XP_002279833.1| PREDICTED: uncharacterized protein LOC100245593 [Vitis vinifera]
           gi|296082508|emb|CBI21513.3| unnamed protein product
           [Vitis vinifera]
          Length = 98

 Score = 80.1 bits (196), Expect(2) = 2e-29
 Identities = 41/64 (64%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
 Frame = -1

Query: 421 KIREMRKQNKRDPSRASLGNEEEFSAQPDSHSQLNQQPHHDDKQ-HSPIARKSILSYFNC 245
           KIREMRKQNKRD SRASLGNEEE  A P +++   Q  HH   Q HSP  R+SIL  F+C
Sbjct: 35  KIREMRKQNKRDVSRASLGNEEELVAPPTTNADTRQTDHHHYHQSHSPTGRRSILGCFSC 94

Query: 244 CVKA 233
           CVKA
Sbjct: 95  CVKA 98



 Score = 74.7 bits (182), Expect(2) = 2e-29
 Identities = 31/37 (83%), Positives = 35/37 (94%)
 Frame = -3

Query: 581 KERNAPWMSVPQFGDWDQKGNLPDYSMDFSKIREMRK 471
           KE+ APW+SVPQFGDWDQKG +PDYS+DFSKIREMRK
Sbjct: 5   KEKAAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRK 41


>ref|XP_003531383.1| PREDICTED: uncharacterized protein LOC100785896 isoform 1 [Glycine
           max]
          Length = 102

 Score = 78.2 bits (191), Expect(2) = 5e-29
 Identities = 43/69 (62%), Positives = 49/69 (71%), Gaps = 6/69 (8%)
 Frame = -1

Query: 421 KIREMRKQNKRDPSRASLGNEEEF------SAQPDSHSQLNQQPHHDDKQHSPIARKSIL 260
           KIRE RKQNK + SRASLGNEEEF      S+   +HS  + QPH+  + HSP ARKS L
Sbjct: 35  KIRETRKQNKTNISRASLGNEEEFMDSTTSSSVNTAHSSEHPQPHYH-QTHSPTARKSFL 93

Query: 259 SYFNCCVKA 233
           SYFNCCVKA
Sbjct: 94  SYFNCCVKA 102



 Score = 75.5 bits (184), Expect(2) = 5e-29
 Identities = 31/37 (83%), Positives = 35/37 (94%)
 Frame = -3

Query: 581 KERNAPWMSVPQFGDWDQKGNLPDYSMDFSKIREMRK 471
           KE+NAPW+SVPQFGDWDQKG +PDYS+DFSKIRE RK
Sbjct: 5   KEKNAPWLSVPQFGDWDQKGQVPDYSLDFSKIRETRK 41


>ref|XP_002310603.1| predicted protein [Populus trichocarpa] gi|222853506|gb|EEE91053.1|
           predicted protein [Populus trichocarpa]
          Length = 107

 Score = 75.9 bits (185), Expect(2) = 3e-28
 Identities = 31/36 (86%), Positives = 35/36 (97%)
 Frame = -3

Query: 578 ERNAPWMSVPQFGDWDQKGNLPDYSMDFSKIREMRK 471
           ++NAPW+SVPQFGDWDQKG LPDYS+DFSKIREMRK
Sbjct: 7   QKNAPWLSVPQFGDWDQKGELPDYSLDFSKIREMRK 42



 Score = 75.5 bits (184), Expect(2) = 3e-28
 Identities = 40/70 (57%), Positives = 47/70 (67%), Gaps = 7/70 (10%)
 Frame = -1

Query: 421 KIREMRKQNKRDPSRASLGNEEEF------SAQPDSHSQLNQQPH-HDDKQHSPIARKSI 263
           KIREMRKQNK+D SRASLGNEEE       +A+P      ++  H H+   HSP  R+SI
Sbjct: 36  KIREMRKQNKKDVSRASLGNEEELINPTATAAKPAQTQDHHRHHHYHEGHHHSPTTRRSI 95

Query: 262 LSYFNCCVKA 233
            SYFNCCVKA
Sbjct: 96  FSYFNCCVKA 105


>ref|XP_002307131.1| predicted protein [Populus trichocarpa] gi|118483863|gb|ABK93822.1|
           unknown [Populus trichocarpa]
           gi|222856580|gb|EEE94127.1| predicted protein [Populus
           trichocarpa]
          Length = 103

 Score = 75.5 bits (184), Expect(2) = 6e-28
 Identities = 31/36 (86%), Positives = 35/36 (97%)
 Frame = -3

Query: 578 ERNAPWMSVPQFGDWDQKGNLPDYSMDFSKIREMRK 471
           ++NAPW+SVPQFGDWDQKG LPDYS+DFSKIREMRK
Sbjct: 7   QKNAPWLSVPQFGDWDQKGELPDYSVDFSKIREMRK 42



 Score = 74.7 bits (182), Expect(2) = 6e-28
 Identities = 42/72 (58%), Positives = 44/72 (61%), Gaps = 9/72 (12%)
 Frame = -1

Query: 421 KIREMRKQNKRDPSRASLGNEEEF---------SAQPDSHSQLNQQPHHDDKQHSPIARK 269
           KIREMRKQNKRD SRASLG EEE          +AQ   H     Q HHD    SP  R+
Sbjct: 36  KIREMRKQNKRDASRASLGKEEELINPTATTAKTAQTHDHRHHYHQDHHD----SPATRR 91

Query: 268 SILSYFNCCVKA 233
           SI SYFNCCVKA
Sbjct: 92  SIFSYFNCCVKA 103


>gb|ACK44531.1| AT5G09960-like protein [Arabidopsis arenosa]
          Length = 113

 Score = 77.8 bits (190), Expect(2) = 1e-27
 Identities = 43/76 (56%), Positives = 48/76 (63%), Gaps = 13/76 (17%)
 Frame = -1

Query: 421 KIREMRKQNKRDPSRASLGNEEEFSAQPDSHSQL---------NQQ----PHHDDKQHSP 281
           KIREMRKQNKRDPSRASLGNEEE    P+S +           NQ+     HH  + HSP
Sbjct: 38  KIREMRKQNKRDPSRASLGNEEELIKPPESATSTANLTTVQSENQREFSPSHHHHQPHSP 97

Query: 280 IARKSILSYFNCCVKA 233
             R+SI S FNCCVKA
Sbjct: 98  STRRSIFSCFNCCVKA 113



 Score = 71.6 bits (174), Expect(2) = 1e-27
 Identities = 31/39 (79%), Positives = 35/39 (89%), Gaps = 2/39 (5%)
 Frame = -3

Query: 581 KERNAPWMSVPQFGDWDQK--GNLPDYSMDFSKIREMRK 471
           KE+N PW+SVPQFGDWDQK  G +PDYSMDF+KIREMRK
Sbjct: 6   KEKNTPWLSVPQFGDWDQKGGGTMPDYSMDFTKIREMRK 44


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