BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015059
         (1379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513039.1| ubiquitin-protein ligase, putative [Ricinus ...   313   5e-83
emb|CBI35119.3| unnamed protein product [Vitis vinifera]              312   1e-82
ref|XP_002264402.1| PREDICTED: U-box domain-containing protein 4...   312   1e-82
emb|CAN81127.1| hypothetical protein VITISV_005390 [Vitis vinifera]   312   1e-82
ref|XP_002299200.1| predicted protein [Populus trichocarpa] gi|2...   287   5e-75

>ref|XP_002513039.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223548050|gb|EEF49542.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 310

 Score =  313 bits (803), Expect = 5e-83
 Identities = 164/274 (59%), Positives = 206/274 (75%), Gaps = 2/274 (0%)
 Frame = -1

Query: 1376 RSLVNRLSSISEQTQLDAICQLRLMTKHDPDSRSLIGESSALPILTETLYSPIQTAQENA 1197
            RSLV++LSS+SEQT+ +A+ +LRL+TKHDPDSR +I E  A+P L ETLYS   TAQENA
Sbjct: 9    RSLVSKLSSVSEQTRSEALSELRLITKHDPDSRPIIAECGAIPYLAETLYSSSHTAQENA 68

Query: 1196 VATLLNISISSRDLLMSTRGILDAXXXXXXXXXXXXXXXXXXXXXXXXXXL--VDSYRPI 1023
             ATLLN+SIS+RD LMSTRG+LDA                          L  VDSYRPI
Sbjct: 69   AATLLNLSISTRDSLMSTRGLLDALGHALSHHSTTTSPLAVQSSAATLHSLLIVDSYRPI 128

Query: 1022 IGAKRDIVYALIEIIKCQNSVPRTIKDGLKALFGVALYPLNRANMIDLGIVGPLFSLVVK 843
            IG+KRDIVY+LI+I+K  NS PR++KD LKA+FG+ALYPLNR  +IDLG V PLFSLV+K
Sbjct: 129  IGSKRDIVYSLIDIVKSPNSPPRSVKDALKAMFGIALYPLNRCTLIDLGAVAPLFSLVLK 188

Query: 842  DGRLGIVEDATAVIAQVAGCYESGEAFKKVSGIGVLVDLLDKETGSSIRARENAVSALLN 663
            DGR+GIVEDATAV+AQ+AGC ES   F + SG+G+L+DLLD  TGSS+R +ENAVSALLN
Sbjct: 189  DGRVGIVEDATAVVAQIAGCEESEGEFARYSGVGILIDLLDLATGSSLRIKENAVSALLN 248

Query: 662  MIRCGDEKIVEDVKEFGVEFLLESICDVAENGSS 561
            ++RCG E++  DV++     ++E I +VAENG+S
Sbjct: 249  LVRCGGERVAADVRDMAA-IVVEGIKEVAENGTS 281


>emb|CBI35119.3| unnamed protein product [Vitis vinifera]
          Length = 311

 Score =  312 bits (799), Expect = 1e-82
 Identities = 163/271 (60%), Positives = 204/271 (75%)
 Frame = -1

Query: 1376 RSLVNRLSSISEQTQLDAICQLRLMTKHDPDSRSLIGESSALPILTETLYSPIQTAQENA 1197
            RSLV RLSS+S+QT+ +A+C+LRL++KHDPDSR  I ++ A+P L ETLYS +   QENA
Sbjct: 9    RSLVARLSSVSQQTRTEALCELRLISKHDPDSRCFIADAGAVPYLCETLYSALPLEQENA 68

Query: 1196 VATLLNISISSRDLLMSTRGILDAXXXXXXXXXXXXXXXXXXXXXXXXXXLVDSYRPIIG 1017
             ATLLN+SISSR LLMSTRG+LDA                          + D YRPIIG
Sbjct: 69   AATLLNLSISSRQLLMSTRGLLDALSHALRSPSSSPAAIQACAATLYSLLVDDDYRPIIG 128

Query: 1016 AKRDIVYALIEIIKCQNSVPRTIKDGLKALFGVALYPLNRANMIDLGIVGPLFSLVVKDG 837
            AKRDIVYAL++II+  ++ PR+IKD LKALFG++LYPLNRA+M+ LG V  LF+L VKDG
Sbjct: 129  AKRDIVYALVDIIRTPHAPPRSIKDALKALFGISLYPLNRASMVGLGAVAALFTLAVKDG 188

Query: 836  RLGIVEDATAVIAQVAGCYESGEAFKKVSGIGVLVDLLDKETGSSIRARENAVSALLNMI 657
            R+GIVEDATAVIAQ+AGC E G+AF+KVSGIG+LVDLLD  TGSSIR +ENAVSALLN++
Sbjct: 189  RVGIVEDATAVIAQIAGCEEGGDAFRKVSGIGILVDLLDPSTGSSIRTKENAVSALLNLV 248

Query: 656  RCGDEKIVEDVKEFGVEFLLESICDVAENGS 564
            +CG E+I  D++E G+  L + I  VA+ GS
Sbjct: 249  QCGGERIAGDMREAGMG-LYDGIAVVADGGS 278


>ref|XP_002264402.1| PREDICTED: U-box domain-containing protein 4 [Vitis vinifera]
          Length = 309

 Score =  312 bits (799), Expect = 1e-82
 Identities = 163/271 (60%), Positives = 204/271 (75%)
 Frame = -1

Query: 1376 RSLVNRLSSISEQTQLDAICQLRLMTKHDPDSRSLIGESSALPILTETLYSPIQTAQENA 1197
            RSLV RLSS+S+QT+ +A+C+LRL++KHDPDSR  I ++ A+P L ETLYS +   QENA
Sbjct: 9    RSLVARLSSVSQQTRTEALCELRLISKHDPDSRCFIADAGAVPYLCETLYSALPLEQENA 68

Query: 1196 VATLLNISISSRDLLMSTRGILDAXXXXXXXXXXXXXXXXXXXXXXXXXXLVDSYRPIIG 1017
             ATLLN+SISSR LLMSTRG+LDA                          + D YRPIIG
Sbjct: 69   AATLLNLSISSRQLLMSTRGLLDALSHALRSPSSSPAAIQACAATLYSLLVDDDYRPIIG 128

Query: 1016 AKRDIVYALIEIIKCQNSVPRTIKDGLKALFGVALYPLNRANMIDLGIVGPLFSLVVKDG 837
            AKRDIVYAL++II+  ++ PR+IKD LKALFG++LYPLNRA+M+ LG V  LF+L VKDG
Sbjct: 129  AKRDIVYALVDIIRTPHAPPRSIKDALKALFGISLYPLNRASMVGLGAVAALFTLAVKDG 188

Query: 836  RLGIVEDATAVIAQVAGCYESGEAFKKVSGIGVLVDLLDKETGSSIRARENAVSALLNMI 657
            R+GIVEDATAVIAQ+AGC E G+AF+KVSGIG+LVDLLD  TGSSIR +ENAVSALLN++
Sbjct: 189  RVGIVEDATAVIAQIAGCEEGGDAFRKVSGIGILVDLLDPSTGSSIRTKENAVSALLNLV 248

Query: 656  RCGDEKIVEDVKEFGVEFLLESICDVAENGS 564
            +CG E+I  D++E G+  L + I  VA+ GS
Sbjct: 249  QCGGERIAGDMREAGMG-LYDGIAVVADGGS 278


>emb|CAN81127.1| hypothetical protein VITISV_005390 [Vitis vinifera]
          Length = 309

 Score =  312 bits (799), Expect = 1e-82
 Identities = 165/271 (60%), Positives = 203/271 (74%)
 Frame = -1

Query: 1376 RSLVNRLSSISEQTQLDAICQLRLMTKHDPDSRSLIGESSALPILTETLYSPIQTAQENA 1197
            RSLV RLSS+S+QT+ +A+C+LRL++KHDPDSR  I ++ A+P L ETLYS +   QENA
Sbjct: 9    RSLVARLSSVSQQTRTEALCELRLISKHDPDSRCFIADAGAVPYLCETLYSALPLEQENA 68

Query: 1196 VATLLNISISSRDLLMSTRGILDAXXXXXXXXXXXXXXXXXXXXXXXXXXLVDSYRPIIG 1017
             ATLLN+SISSR LLMSTRG+LDA                          + D YRPIIG
Sbjct: 69   AATLLNLSISSRQLLMSTRGLLDALSHALRSPSSSPAAIQACAATLYSLLVDDDYRPIIG 128

Query: 1016 AKRDIVYALIEIIKCQNSVPRTIKDGLKALFGVALYPLNRANMIDLGIVGPLFSLVVKDG 837
            AKRDIVYAL++II+  ++ PR+IKD LKALFG++LYPLNRA+M+ LG V  LFSL VKDG
Sbjct: 129  AKRDIVYALVDIIRTPHAPPRSIKDALKALFGISLYPLNRASMVGLGAVAALFSLAVKDG 188

Query: 836  RLGIVEDATAVIAQVAGCYESGEAFKKVSGIGVLVDLLDKETGSSIRARENAVSALLNMI 657
            R+GIVEDATAVIAQ+AGC E G+AF+KVSGIGVLVDLLD  TGSSIR +ENAVSALLN+ 
Sbjct: 189  RVGIVEDATAVIAQIAGCEEGGDAFRKVSGIGVLVDLLDPSTGSSIRTKENAVSALLNLA 248

Query: 656  RCGDEKIVEDVKEFGVEFLLESICDVAENGS 564
            +CG E+I  D++E G+  L + I  VA+ GS
Sbjct: 249  QCGGERIAGDMREAGMG-LYDGIAVVADGGS 278


>ref|XP_002299200.1| predicted protein [Populus trichocarpa] gi|222846458|gb|EEE84005.1|
            predicted protein [Populus trichocarpa]
          Length = 305

 Score =  287 bits (734), Expect = 5e-75
 Identities = 162/274 (59%), Positives = 195/274 (71%), Gaps = 2/274 (0%)
 Frame = -1

Query: 1376 RSLVNRLSSISEQTQLDAICQLRLMTKHDPDSRSLIGESSALPILTETLYSPIQTAQENA 1197
            R LV RL S+SEQT+ +A+ +LRLMTK+D +SR +I E+ A+P L ETLYS    +Q+NA
Sbjct: 9    RLLVTRLGSVSEQTRSEALAELRLMTKNDAESRPIIAEAGAIPYLEETLYSSSHDSQDNA 68

Query: 1196 VATLLNISISSRDLLMSTRGILDAXXXXXXXXXXXXXXXXXXXXXXXXXXLV--DSYRPI 1023
             A LLNISISSR  LMSTRG+LDA                          L+  DSYRP+
Sbjct: 69   AAILLNISISSRTALMSTRGLLDAISHVLRHHATNSSPFAVQSSAATLHSLLVDDSYRPV 128

Query: 1022 IGAKRDIVYALIEIIKCQNSVPRTIKDGLKALFGVALYPLNRANMIDLGIVGPLFSLVVK 843
            IGAKRDIVY+LIEIIK  NS PR++KD LKALFG+AL+PLNRAN+I LG V  LFSLV+K
Sbjct: 129  IGAKRDIVYSLIEIIKRPNSPPRSVKDALKALFGIALFPLNRANLIGLGGVAALFSLVLK 188

Query: 842  DGRLGIVEDATAVIAQVAGCYESGEAFKKVSGIGVLVDLLDKETGSSIRARENAVSALLN 663
            DGR+GIVEDATAVIAQ+AGC ES   F KVSG+ VLVDLLD  TGSS R +ENAV ALLN
Sbjct: 189  DGRVGIVEDATAVIAQIAGCAESEREFWKVSGVKVLVDLLDVGTGSSERVKENAVGALLN 248

Query: 662  MIRCGDEKIVEDVKEFGVEFLLESICDVAENGSS 561
            ++ CG   +V+ VKE G    +E I DV ENG++
Sbjct: 249  LVSCGGGGVVKQVKEMG-PGAVEGIRDVVENGTA 281