BLASTX nr result
ID: Coptis24_contig00015059
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00015059 (1379 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002513039.1| ubiquitin-protein ligase, putative [Ricinus ... 313 5e-83 emb|CBI35119.3| unnamed protein product [Vitis vinifera] 312 1e-82 ref|XP_002264402.1| PREDICTED: U-box domain-containing protein 4... 312 1e-82 emb|CAN81127.1| hypothetical protein VITISV_005390 [Vitis vinifera] 312 1e-82 ref|XP_002299200.1| predicted protein [Populus trichocarpa] gi|2... 287 5e-75 >ref|XP_002513039.1| ubiquitin-protein ligase, putative [Ricinus communis] gi|223548050|gb|EEF49542.1| ubiquitin-protein ligase, putative [Ricinus communis] Length = 310 Score = 313 bits (803), Expect = 5e-83 Identities = 164/274 (59%), Positives = 206/274 (75%), Gaps = 2/274 (0%) Frame = -1 Query: 1376 RSLVNRLSSISEQTQLDAICQLRLMTKHDPDSRSLIGESSALPILTETLYSPIQTAQENA 1197 RSLV++LSS+SEQT+ +A+ +LRL+TKHDPDSR +I E A+P L ETLYS TAQENA Sbjct: 9 RSLVSKLSSVSEQTRSEALSELRLITKHDPDSRPIIAECGAIPYLAETLYSSSHTAQENA 68 Query: 1196 VATLLNISISSRDLLMSTRGILDAXXXXXXXXXXXXXXXXXXXXXXXXXXL--VDSYRPI 1023 ATLLN+SIS+RD LMSTRG+LDA L VDSYRPI Sbjct: 69 AATLLNLSISTRDSLMSTRGLLDALGHALSHHSTTTSPLAVQSSAATLHSLLIVDSYRPI 128 Query: 1022 IGAKRDIVYALIEIIKCQNSVPRTIKDGLKALFGVALYPLNRANMIDLGIVGPLFSLVVK 843 IG+KRDIVY+LI+I+K NS PR++KD LKA+FG+ALYPLNR +IDLG V PLFSLV+K Sbjct: 129 IGSKRDIVYSLIDIVKSPNSPPRSVKDALKAMFGIALYPLNRCTLIDLGAVAPLFSLVLK 188 Query: 842 DGRLGIVEDATAVIAQVAGCYESGEAFKKVSGIGVLVDLLDKETGSSIRARENAVSALLN 663 DGR+GIVEDATAV+AQ+AGC ES F + SG+G+L+DLLD TGSS+R +ENAVSALLN Sbjct: 189 DGRVGIVEDATAVVAQIAGCEESEGEFARYSGVGILIDLLDLATGSSLRIKENAVSALLN 248 Query: 662 MIRCGDEKIVEDVKEFGVEFLLESICDVAENGSS 561 ++RCG E++ DV++ ++E I +VAENG+S Sbjct: 249 LVRCGGERVAADVRDMAA-IVVEGIKEVAENGTS 281 >emb|CBI35119.3| unnamed protein product [Vitis vinifera] Length = 311 Score = 312 bits (799), Expect = 1e-82 Identities = 163/271 (60%), Positives = 204/271 (75%) Frame = -1 Query: 1376 RSLVNRLSSISEQTQLDAICQLRLMTKHDPDSRSLIGESSALPILTETLYSPIQTAQENA 1197 RSLV RLSS+S+QT+ +A+C+LRL++KHDPDSR I ++ A+P L ETLYS + QENA Sbjct: 9 RSLVARLSSVSQQTRTEALCELRLISKHDPDSRCFIADAGAVPYLCETLYSALPLEQENA 68 Query: 1196 VATLLNISISSRDLLMSTRGILDAXXXXXXXXXXXXXXXXXXXXXXXXXXLVDSYRPIIG 1017 ATLLN+SISSR LLMSTRG+LDA + D YRPIIG Sbjct: 69 AATLLNLSISSRQLLMSTRGLLDALSHALRSPSSSPAAIQACAATLYSLLVDDDYRPIIG 128 Query: 1016 AKRDIVYALIEIIKCQNSVPRTIKDGLKALFGVALYPLNRANMIDLGIVGPLFSLVVKDG 837 AKRDIVYAL++II+ ++ PR+IKD LKALFG++LYPLNRA+M+ LG V LF+L VKDG Sbjct: 129 AKRDIVYALVDIIRTPHAPPRSIKDALKALFGISLYPLNRASMVGLGAVAALFTLAVKDG 188 Query: 836 RLGIVEDATAVIAQVAGCYESGEAFKKVSGIGVLVDLLDKETGSSIRARENAVSALLNMI 657 R+GIVEDATAVIAQ+AGC E G+AF+KVSGIG+LVDLLD TGSSIR +ENAVSALLN++ Sbjct: 189 RVGIVEDATAVIAQIAGCEEGGDAFRKVSGIGILVDLLDPSTGSSIRTKENAVSALLNLV 248 Query: 656 RCGDEKIVEDVKEFGVEFLLESICDVAENGS 564 +CG E+I D++E G+ L + I VA+ GS Sbjct: 249 QCGGERIAGDMREAGMG-LYDGIAVVADGGS 278 >ref|XP_002264402.1| PREDICTED: U-box domain-containing protein 4 [Vitis vinifera] Length = 309 Score = 312 bits (799), Expect = 1e-82 Identities = 163/271 (60%), Positives = 204/271 (75%) Frame = -1 Query: 1376 RSLVNRLSSISEQTQLDAICQLRLMTKHDPDSRSLIGESSALPILTETLYSPIQTAQENA 1197 RSLV RLSS+S+QT+ +A+C+LRL++KHDPDSR I ++ A+P L ETLYS + QENA Sbjct: 9 RSLVARLSSVSQQTRTEALCELRLISKHDPDSRCFIADAGAVPYLCETLYSALPLEQENA 68 Query: 1196 VATLLNISISSRDLLMSTRGILDAXXXXXXXXXXXXXXXXXXXXXXXXXXLVDSYRPIIG 1017 ATLLN+SISSR LLMSTRG+LDA + D YRPIIG Sbjct: 69 AATLLNLSISSRQLLMSTRGLLDALSHALRSPSSSPAAIQACAATLYSLLVDDDYRPIIG 128 Query: 1016 AKRDIVYALIEIIKCQNSVPRTIKDGLKALFGVALYPLNRANMIDLGIVGPLFSLVVKDG 837 AKRDIVYAL++II+ ++ PR+IKD LKALFG++LYPLNRA+M+ LG V LF+L VKDG Sbjct: 129 AKRDIVYALVDIIRTPHAPPRSIKDALKALFGISLYPLNRASMVGLGAVAALFTLAVKDG 188 Query: 836 RLGIVEDATAVIAQVAGCYESGEAFKKVSGIGVLVDLLDKETGSSIRARENAVSALLNMI 657 R+GIVEDATAVIAQ+AGC E G+AF+KVSGIG+LVDLLD TGSSIR +ENAVSALLN++ Sbjct: 189 RVGIVEDATAVIAQIAGCEEGGDAFRKVSGIGILVDLLDPSTGSSIRTKENAVSALLNLV 248 Query: 656 RCGDEKIVEDVKEFGVEFLLESICDVAENGS 564 +CG E+I D++E G+ L + I VA+ GS Sbjct: 249 QCGGERIAGDMREAGMG-LYDGIAVVADGGS 278 >emb|CAN81127.1| hypothetical protein VITISV_005390 [Vitis vinifera] Length = 309 Score = 312 bits (799), Expect = 1e-82 Identities = 165/271 (60%), Positives = 203/271 (74%) Frame = -1 Query: 1376 RSLVNRLSSISEQTQLDAICQLRLMTKHDPDSRSLIGESSALPILTETLYSPIQTAQENA 1197 RSLV RLSS+S+QT+ +A+C+LRL++KHDPDSR I ++ A+P L ETLYS + QENA Sbjct: 9 RSLVARLSSVSQQTRTEALCELRLISKHDPDSRCFIADAGAVPYLCETLYSALPLEQENA 68 Query: 1196 VATLLNISISSRDLLMSTRGILDAXXXXXXXXXXXXXXXXXXXXXXXXXXLVDSYRPIIG 1017 ATLLN+SISSR LLMSTRG+LDA + D YRPIIG Sbjct: 69 AATLLNLSISSRQLLMSTRGLLDALSHALRSPSSSPAAIQACAATLYSLLVDDDYRPIIG 128 Query: 1016 AKRDIVYALIEIIKCQNSVPRTIKDGLKALFGVALYPLNRANMIDLGIVGPLFSLVVKDG 837 AKRDIVYAL++II+ ++ PR+IKD LKALFG++LYPLNRA+M+ LG V LFSL VKDG Sbjct: 129 AKRDIVYALVDIIRTPHAPPRSIKDALKALFGISLYPLNRASMVGLGAVAALFSLAVKDG 188 Query: 836 RLGIVEDATAVIAQVAGCYESGEAFKKVSGIGVLVDLLDKETGSSIRARENAVSALLNMI 657 R+GIVEDATAVIAQ+AGC E G+AF+KVSGIGVLVDLLD TGSSIR +ENAVSALLN+ Sbjct: 189 RVGIVEDATAVIAQIAGCEEGGDAFRKVSGIGVLVDLLDPSTGSSIRTKENAVSALLNLA 248 Query: 656 RCGDEKIVEDVKEFGVEFLLESICDVAENGS 564 +CG E+I D++E G+ L + I VA+ GS Sbjct: 249 QCGGERIAGDMREAGMG-LYDGIAVVADGGS 278 >ref|XP_002299200.1| predicted protein [Populus trichocarpa] gi|222846458|gb|EEE84005.1| predicted protein [Populus trichocarpa] Length = 305 Score = 287 bits (734), Expect = 5e-75 Identities = 162/274 (59%), Positives = 195/274 (71%), Gaps = 2/274 (0%) Frame = -1 Query: 1376 RSLVNRLSSISEQTQLDAICQLRLMTKHDPDSRSLIGESSALPILTETLYSPIQTAQENA 1197 R LV RL S+SEQT+ +A+ +LRLMTK+D +SR +I E+ A+P L ETLYS +Q+NA Sbjct: 9 RLLVTRLGSVSEQTRSEALAELRLMTKNDAESRPIIAEAGAIPYLEETLYSSSHDSQDNA 68 Query: 1196 VATLLNISISSRDLLMSTRGILDAXXXXXXXXXXXXXXXXXXXXXXXXXXLV--DSYRPI 1023 A LLNISISSR LMSTRG+LDA L+ DSYRP+ Sbjct: 69 AAILLNISISSRTALMSTRGLLDAISHVLRHHATNSSPFAVQSSAATLHSLLVDDSYRPV 128 Query: 1022 IGAKRDIVYALIEIIKCQNSVPRTIKDGLKALFGVALYPLNRANMIDLGIVGPLFSLVVK 843 IGAKRDIVY+LIEIIK NS PR++KD LKALFG+AL+PLNRAN+I LG V LFSLV+K Sbjct: 129 IGAKRDIVYSLIEIIKRPNSPPRSVKDALKALFGIALFPLNRANLIGLGGVAALFSLVLK 188 Query: 842 DGRLGIVEDATAVIAQVAGCYESGEAFKKVSGIGVLVDLLDKETGSSIRARENAVSALLN 663 DGR+GIVEDATAVIAQ+AGC ES F KVSG+ VLVDLLD TGSS R +ENAV ALLN Sbjct: 189 DGRVGIVEDATAVIAQIAGCAESEREFWKVSGVKVLVDLLDVGTGSSERVKENAVGALLN 248 Query: 662 MIRCGDEKIVEDVKEFGVEFLLESICDVAENGSS 561 ++ CG +V+ VKE G +E I DV ENG++ Sbjct: 249 LVSCGGGGVVKQVKEMG-PGAVEGIRDVVENGTA 281